RNA–Protein interactions for RNA: ENST00000474952.5

TFAP2A-210, Transcript of transcription factor AP-2 alpha, humanhuman

TSL 5

Gene TFAP2A, Length 1,621 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFAP2A-210ENST00000474952 VPS8Q8N3P4 1428 aa38.85■■■■□ 3.81
TFAP2A-210ENST00000474952 SYNJ2O15056 1496 aa38.71■■■■□ 3.79
TFAP2A-210ENST00000474952 GRIN2AQ12879 1464 aa38.71■■■■□ 3.79
TFAP2A-210ENST00000474952 EFCAB5A4FU69 1503 aa38.68■■■■□ 3.78
TFAP2A-210ENST00000474952 CHMP7Q8WUX9 453 aaPredicted RBP38.6■■■■□ 3.77
TFAP2A-210ENST00000474952 PPARGC1BQ86YN6 1023 aaKnown RBP38.6■■■■□ 3.77
TFAP2A-210ENST00000474952 IQGAP2Q13576 1575 aa38.59■■■■□ 3.77
TFAP2A-210ENST00000474952 SAMD9Q5K651 1589 aa38.56■■■■□ 3.76
TFAP2A-210ENST00000474952 TRIM26Q12899 539 aaPredicted RBP38.56■■■■□ 3.76
TFAP2A-210ENST00000474952 KIAA0586Q9BVV6 1533 aa38.51■■■■□ 3.76
TFAP2A-210ENST00000474952 PCGF6Q9BYE7 350 aa38.5■■■■□ 3.75
TFAP2A-210ENST00000474952 FBLN2P98095 1184 aa38.49■■■■□ 3.75
TFAP2A-210ENST00000474952 P3H3Q8IVL6 736 aa38.49■■■■□ 3.75
TFAP2A-210ENST00000474952 FHOD3Q2V2M9 1422 aa38.49■■■■□ 3.75
TFAP2A-210ENST00000474952 CEP170Q5SW79 1584 aa38.48■■■■□ 3.75
TFAP2A-210ENST00000474952 APLP2Q06481 763 aa38.43■■■■□ 3.74
TFAP2A-210ENST00000474952 NUP160Q12769 1436 aa38.43■■■■□ 3.74
TFAP2A-210ENST00000474952 UGGT2Q9NYU1 1516 aa38.41■■■■□ 3.74
TFAP2A-210ENST00000474952 CHD1O14646 1710 aa38.35■■■■□ 3.73
TFAP2A-210ENST00000474952 PCF11O94913 1555 aaKnown RBP38.31■■■■□ 3.72
TFAP2A-210ENST00000474952 FMN1Q68DA7 1419 aa38.31■■■■□ 3.72
TFAP2A-210ENST00000474952 TTBK1Q5TCY1 1321 aaPredicted RBP38.29■■■■□ 3.72
TFAP2A-210ENST00000474952 CASKIN1Q8WXD9 1431 aa38.23■■■■□ 3.71
TFAP2A-210ENST00000474952 FYCO1Q9BQS8 1478 aa38.23■■■■□ 3.71
TFAP2A-210ENST00000474952 KIAA0556O60303 1618 aa38.21■■■■□ 3.71
TFAP2A-210ENST00000474952 DISP1Q96F81 1524 aa38.21■■■■□ 3.71
TFAP2A-210ENST00000474952 MAP3K1Q13233 1512 aa38.2■■■■□ 3.71
TFAP2A-210ENST00000474952 TIAM1Q13009 1591 aa38.16■■■■□ 3.7
TFAP2A-210ENST00000474952 CFAP43Q8NDM7 1665 aa38.11■■■■□ 3.69
TFAP2A-210ENST00000474952 KANK4Q5T7N3 995 aaPredicted RBP38.11■■■■□ 3.69
TFAP2A-210ENST00000474952 JPH4Q96JJ6 628 aa38.11■■■■□ 3.69
TFAP2A-210ENST00000474952 ATP1B4Q9UN42 357 aaPredicted RBP38.07■■■■□ 3.68
TFAP2A-210ENST00000474952 CARMIL2Q6F5E8 1435 aa38.02■■■■□ 3.68
TFAP2A-210ENST00000474952 LRRIQ1Q96JM4 1722 aa37.98■■■■□ 3.67
TFAP2A-210ENST00000474952 LRRC9Q6ZRR7 1453 aa37.97■■■■□ 3.67
TFAP2A-210ENST00000474952 HECW1Q76N89 1606 aa37.95■■■■□ 3.67
TFAP2A-210ENST00000474952 SHROOM2Q13796 1616 aa37.93■■■■□ 3.66
TFAP2A-210ENST00000474952 CLASP1Q7Z460 1538 aa37.89■■■■□ 3.66
TFAP2A-210ENST00000474952 PRG4Q92954 1404 aaPredicted RBP37.89■■■■□ 3.66
TFAP2A-210ENST00000474952 CCDC18Q5T9S5 1454 aa37.85■■■■□ 3.65
TFAP2A-210ENST00000474952 RAPGEF6Q8TEU7 1601 aa37.84■■■■□ 3.65
TFAP2A-210ENST00000474952 EPRSP07814 1512 aaKnown RBP37.79■■■■□ 3.64
TFAP2A-210ENST00000474952 NUP153P49790 1475 aaKnown RBP37.72■■■■□ 3.63
TFAP2A-210ENST00000474952 PLB1Q6P1J6 1458 aa37.71■■■■□ 3.63
TFAP2A-210ENST00000474952 MTUS2Q5JR59 1369 aa37.7■■■■□ 3.63
TFAP2A-210ENST00000474952 CDK13Q14004 1512 aaKnown RBP37.7■■■■□ 3.63
TFAP2A-210ENST00000474952 RRBP1Q9P2E9 1410 aaKnown RBP37.68■■■■□ 3.62
TFAP2A-210ENST00000474952 EHBP1L1Q8N3D4 1523 aa37.67■■■■□ 3.62
TFAP2A-210ENST00000474952 ABCA8O94911 1581 aa37.67■■■■□ 3.62
TFAP2A-210ENST00000474952 ERCC6L2Q5T890 1561 aa37.66■■■■□ 3.62
TFAP2A-210ENST00000474952 PTPRGP23470 1445 aa37.64■■■■□ 3.62
TFAP2A-210ENST00000474952 MAGI3Q5TCQ9 1506 aa37.64■■■■□ 3.62
TFAP2A-210ENST00000474952 PHLDB1Q86UU1 1377 aa37.61■■■■□ 3.61
TFAP2A-210ENST00000474952 ARID3CA6NKF2 412 aa37.59■■■■□ 3.61
TFAP2A-210ENST00000474952 SUPT6HQ7KZ85 1726 aaKnown RBP37.57■■■■□ 3.61
TFAP2A-210ENST00000474952 CCNB3Q8WWL7 1395 aa37.56■■■■□ 3.6
TFAP2A-210ENST00000474952 NCOA2Q15596 1464 aa37.51■■■■□ 3.6
TFAP2A-210ENST00000474952 OSCARQ8IYS5 282 aa37.51■■■■□ 3.6
TFAP2A-210ENST00000474952 ARHGEF11O15085 1522 aa37.47■■■■□ 3.59
TFAP2A-210ENST00000474952 HNRNPUL2Q1KMD3 747 aaKnown RBP37.46■■■■□ 3.59
TFAP2A-210ENST00000474952 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP37.44■■■■□ 3.58
TFAP2A-210ENST00000474952 UACAQ9BZF9 1416 aa37.44■■■■□ 3.58
TFAP2A-210ENST00000474952 CDK11AQ9UQ88 783 aaPredicted RBP37.43■■■■□ 3.58
TFAP2A-210ENST00000474952 ATP10BO94823 1461 aa37.4■■■■□ 3.58
TFAP2A-210ENST00000474952 MYOM3Q5VTT5 1437 aa37.36■■■■□ 3.57
TFAP2A-210ENST00000474952 FGD6Q6ZV73 1430 aa37.36■■■■□ 3.57
TFAP2A-210ENST00000474952 TROQ12816 1431 aaPredicted RBP37.35■■■■□ 3.57
TFAP2A-210ENST00000474952 HRCP23327 699 aa37.34■■■■□ 3.57
TFAP2A-210ENST00000474952 ABCC2Q92887 1545 aa37.34■■■■□ 3.57
TFAP2A-210ENST00000474952 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP37.29■■■■□ 3.56
TFAP2A-210ENST00000474952 ADCY10Q96PN6 1610 aa37.28■■■■□ 3.56
TFAP2A-210ENST00000474952 FAM50AQ14320 339 aaKnown RBP37.27■■■■□ 3.56
TFAP2A-210ENST00000474952 UHRF1BP1LA0JNW5 1464 aa37.25■■■■□ 3.55
TFAP2A-210ENST00000474952 PLEKHD1A6NEE1 506 aa37.22■■■■□ 3.55
TFAP2A-210ENST00000474952 KIF14Q15058 1648 aa37.19■■■■□ 3.54
TFAP2A-210ENST00000474952 PTPN23Q9H3S7 1636 aa37.19■■■■□ 3.54
TFAP2A-210ENST00000474952 ITGAEP38570 1179 aa37.18■■■■□ 3.54
TFAP2A-210ENST00000474952 MIA2Q96PC5 1412 aa37.15■■■■□ 3.54
TFAP2A-210ENST00000474952 TCOF1Q13428 1488 aaKnown RBP37.13■■■■□ 3.53
TFAP2A-210ENST00000474952 ZCCHC11Q5TAX3 1644 aaKnown RBP37.1■■■■□ 3.53
TFAP2A-210ENST00000474952 KDM5BQ9UGL1 1544 aa37.1■■■■□ 3.53
TFAP2A-210ENST00000474952 ITSN2Q9NZM3 1697 aa37.07■■■■□ 3.52
TFAP2A-210ENST00000474952 ABCC10Q5T3U5 1492 aa37.04■■■■□ 3.52
TFAP2A-210ENST00000474952 CCER1Q8TC90 406 aaPredicted RBP37.03■■■■□ 3.52
TFAP2A-210ENST00000474952 GPATCH8Q9UKJ3 1502 aaKnown RBP37.02■■■■□ 3.52
TFAP2A-210ENST00000474952 CDC42BPAQ5VT25 1732 aa36.96■■■■□ 3.51
TFAP2A-210ENST00000474952 ZEB1P37275 1124 aaPredicted RBP36.96■■■■□ 3.51
TFAP2A-210ENST00000474952 PTPRKQ15262 1439 aa36.93■■■■□ 3.5
TFAP2A-210ENST00000474952 CFDP1Q9UEE9 299 aaPredicted RBP36.9■■■■□ 3.5
TFAP2A-210ENST00000474952 SETD5Q9C0A6 1442 aa36.88■■■■□ 3.5
TFAP2A-210ENST00000474952 CAMSAP2Q08AD1 1489 aa36.85■■■■□ 3.49
TFAP2A-210ENST00000474952 ZNF644Q9H582 1327 aaPredicted RBP36.84■■■■□ 3.49
TFAP2A-210ENST00000474952 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP36.84■■■■□ 3.49
TFAP2A-210ENST00000474952 RAB3GAP2Q9H2M9 1393 aa36.84■■■■□ 3.49
TFAP2A-210ENST00000474952 TTC37Q6PGP7 1564 aa36.83■■■■□ 3.49
TFAP2A-210ENST00000474952 DNMT1P26358 1616 aaKnown RBP36.82■■■■□ 3.48
TFAP2A-210ENST00000474952 PREX2Q70Z35 1606 aa36.81■■■■□ 3.48
TFAP2A-210ENST00000474952 CDC42BPBQ9Y5S2 1711 aa36.77■■■■□ 3.48
TFAP2A-210ENST00000474952 DAPK1P53355 1430 aa36.77■■■■□ 3.48
TFAP2A-210ENST00000474952 KCNH8Q96L42 1107 aa36.77■■■■□ 3.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms