RNA–Protein interactions for RNA: ENST00000474430.5

TRIM46-208, Transcript of tripartite motif containing 46, humanhuman

TSL 5

Gene TRIM46, Length 2,704 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM46-208ENST00000474430 ARHGAP35Q9NRY4 1499 aa24.72■■□□□ 1.55
TRIM46-208ENST00000474430 EIF4G3O43432 1585 aaKnown RBP24.72■■□□□ 1.55
TRIM46-208ENST00000474430 ADAMTS12P58397 1594 aa24.71■■□□□ 1.55
TRIM46-208ENST00000474430 CTTNBP2Q8WZ74 1663 aa24.7■■□□□ 1.54
TRIM46-208ENST00000474430 SNAPC4Q5SXM2 1469 aa24.62■■□□□ 1.53
TRIM46-208ENST00000474430 APLP2Q06481 763 aa24.61■■□□□ 1.53
TRIM46-208ENST00000474430 EFCAB5A4FU69 1503 aa24.6■■□□□ 1.53
TRIM46-208ENST00000474430 MAGI1Q96QZ7 1491 aaPredicted RBP24.59■■□□□ 1.53
TRIM46-208ENST00000474430 GRIN2AQ12879 1464 aa24.49■■□□□ 1.51
TRIM46-208ENST00000474430 SYNJ2O15056 1496 aa24.49■■□□□ 1.51
TRIM46-208ENST00000474430 TTBK1Q5TCY1 1321 aaPredicted RBP24.48■■□□□ 1.51
TRIM46-208ENST00000474430 P3H3Q8IVL6 736 aa24.47■■□□□ 1.51
TRIM46-208ENST00000474430 IQGAP2Q13576 1575 aa24.46■■□□□ 1.51
TRIM46-208ENST00000474430 FHOD3Q2V2M9 1422 aa24.46■■□□□ 1.51
TRIM46-208ENST00000474430 SAMD9Q5K651 1589 aa24.46■■□□□ 1.51
TRIM46-208ENST00000474430 CHMP7Q8WUX9 453 aaPredicted RBP24.45■■□□□ 1.5
TRIM46-208ENST00000474430 KIAA0586Q9BVV6 1533 aa24.41■■□□□ 1.5
TRIM46-208ENST00000474430 PELP1Q8IZL8 1130 aaKnown RBP24.4■■□□□ 1.5
TRIM46-208ENST00000474430 FMN1Q68DA7 1419 aa24.39■■□□□ 1.49
TRIM46-208ENST00000474430 MAP3K1Q13233 1512 aa24.36■■□□□ 1.49
TRIM46-208ENST00000474430 FBLN2P98095 1184 aa24.36■■□□□ 1.49
TRIM46-208ENST00000474430 UGGT2Q9NYU1 1516 aa24.35■■□□□ 1.49
TRIM46-208ENST00000474430 PCF11O94913 1555 aaKnown RBP24.35■■□□□ 1.49
TRIM46-208ENST00000474430 FYCO1Q9BQS8 1478 aa24.34■■□□□ 1.49
TRIM46-208ENST00000474430 CASKIN1Q8WXD9 1431 aa24.34■■□□□ 1.49
TRIM46-208ENST00000474430 CEP170Q5SW79 1584 aa24.32■■□□□ 1.48
TRIM46-208ENST00000474430 NUP160Q12769 1436 aa24.31■■□□□ 1.48
TRIM46-208ENST00000474430 KANK4Q5T7N3 995 aaPredicted RBP24.3■■□□□ 1.48
TRIM46-208ENST00000474430 TIAM1Q13009 1591 aa24.3■■□□□ 1.48
TRIM46-208ENST00000474430 ATP1B4Q9UN42 357 aaPredicted RBP24.25■■□□□ 1.47
TRIM46-208ENST00000474430 CFAP43Q8NDM7 1665 aa24.24■■□□□ 1.47
TRIM46-208ENST00000474430 KIAA0556O60303 1618 aa24.21■■□□□ 1.47
TRIM46-208ENST00000474430 DISP1Q96F81 1524 aa24.21■■□□□ 1.47
TRIM46-208ENST00000474430 LRRC9Q6ZRR7 1453 aa24.19■■□□□ 1.46
TRIM46-208ENST00000474430 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.17■■□□□ 1.46
TRIM46-208ENST00000474430 CCER1Q8TC90 406 aaPredicted RBP24.16■■□□□ 1.46
TRIM46-208ENST00000474430 CHD1O14646 1710 aa24.15■■□□□ 1.46
TRIM46-208ENST00000474430 JPH4Q96JJ6 628 aa24.15■■□□□ 1.46
TRIM46-208ENST00000474430 MYT1Q01538 1121 aa24.14■■□□□ 1.46
TRIM46-208ENST00000474430 CARMIL2Q6F5E8 1435 aa24.13■■□□□ 1.45
TRIM46-208ENST00000474430 HECW1Q76N89 1606 aa24.11■■□□□ 1.45
TRIM46-208ENST00000474430 CCDC18Q5T9S5 1454 aa24.08■■□□□ 1.45
TRIM46-208ENST00000474430 RRBP1Q9P2E9 1410 aaKnown RBP24.07■■□□□ 1.44
TRIM46-208ENST00000474430 LRRIQ1Q96JM4 1722 aa24.06■■□□□ 1.44
TRIM46-208ENST00000474430 MTUS2Q5JR59 1369 aa24.03■■□□□ 1.44
TRIM46-208ENST00000474430 EPRSP07814 1512 aaKnown RBP24.01■■□□□ 1.43
TRIM46-208ENST00000474430 CCNB3Q8WWL7 1395 aa24■■□□□ 1.43
TRIM46-208ENST00000474430 RAPGEF6Q8TEU7 1601 aa23.99■■□□□ 1.43
TRIM46-208ENST00000474430 HNRNPUL2Q1KMD3 747 aaKnown RBP23.98■■□□□ 1.43
TRIM46-208ENST00000474430 EHBP1L1Q8N3D4 1523 aa23.98■■□□□ 1.43
TRIM46-208ENST00000474430 PRG4Q92954 1404 aaPredicted RBP23.98■■□□□ 1.43
TRIM46-208ENST00000474430 PHLDB1Q86UU1 1377 aa23.98■■□□□ 1.43
TRIM46-208ENST00000474430 SHROOM2Q13796 1616 aa23.94■■□□□ 1.42
TRIM46-208ENST00000474430 NUP153P49790 1475 aaKnown RBP23.93■■□□□ 1.42
TRIM46-208ENST00000474430 CDK13Q14004 1512 aaKnown RBP23.93■■□□□ 1.42
TRIM46-208ENST00000474430 SUPT6HQ7KZ85 1726 aaKnown RBP23.9■■□□□ 1.42
TRIM46-208ENST00000474430 PLB1Q6P1J6 1458 aa23.89■■□□□ 1.42
TRIM46-208ENST00000474430 CLASP1Q7Z460 1538 aa23.89■■□□□ 1.42
TRIM46-208ENST00000474430 MAGI3Q5TCQ9 1506 aa23.89■■□□□ 1.41
TRIM46-208ENST00000474430 NCOA2Q15596 1464 aa23.87■■□□□ 1.41
TRIM46-208ENST00000474430 PTPRGP23470 1445 aa23.86■■□□□ 1.41
TRIM46-208ENST00000474430 ARID3CA6NKF2 412 aa23.85■■□□□ 1.41
TRIM46-208ENST00000474430 ABCA8O94911 1581 aa23.85■■□□□ 1.41
TRIM46-208ENST00000474430 CDK11AQ9UQ88 783 aaPredicted RBP23.84■■□□□ 1.41
TRIM46-208ENST00000474430 ARHGEF11O15085 1522 aa23.82■■□□□ 1.4
TRIM46-208ENST00000474430 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.82■■□□□ 1.4
TRIM46-208ENST00000474430 FGD6Q6ZV73 1430 aa23.81■■□□□ 1.4
TRIM46-208ENST00000474430 MYOM3Q5VTT5 1437 aa23.81■■□□□ 1.4
TRIM46-208ENST00000474430 FAM50AQ14320 339 aaKnown RBP23.8■■□□□ 1.4
TRIM46-208ENST00000474430 ITGAEP38570 1179 aa23.75■■□□□ 1.39
TRIM46-208ENST00000474430 ERCC6L2Q5T890 1561 aa23.75■■□□□ 1.39
TRIM46-208ENST00000474430 TROQ12816 1431 aaPredicted RBP23.73■■□□□ 1.39
TRIM46-208ENST00000474430 UACAQ9BZF9 1416 aa23.72■■□□□ 1.39
TRIM46-208ENST00000474430 ATP10BO94823 1461 aa23.71■■□□□ 1.39
TRIM46-208ENST00000474430 MIA2Q96PC5 1412 aa23.67■■□□□ 1.38
TRIM46-208ENST00000474430 PTPN23Q9H3S7 1636 aa23.66■■□□□ 1.38
TRIM46-208ENST00000474430 PLEKHD1A6NEE1 506 aa23.66■■□□□ 1.38
TRIM46-208ENST00000474430 DIEXFQ68CQ4 756 aaKnown RBP23.65■■□□□ 1.38
TRIM46-208ENST00000474430 OSCARQ8IYS5 282 aa23.65■■□□□ 1.38
TRIM46-208ENST00000474430 TCOF1Q13428 1488 aaKnown RBP23.65■■□□□ 1.38
TRIM46-208ENST00000474430 ADCY10Q96PN6 1610 aa23.64■■□□□ 1.38
TRIM46-208ENST00000474430 ABCC2Q92887 1545 aa23.63■■□□□ 1.37
TRIM46-208ENST00000474430 ZNF316A6NFI3 1004 aaPredicted RBP23.6■■□□□ 1.37
TRIM46-208ENST00000474430 SETD5Q9C0A6 1442 aa23.59■■□□□ 1.37
TRIM46-208ENST00000474430 UHRF1BP1LA0JNW5 1464 aa23.58■■□□□ 1.36
TRIM46-208ENST00000474430 CLSPNQ9HAW4 1339 aa23.57■■□□□ 1.36
TRIM46-208ENST00000474430 KIF14Q15058 1648 aa23.57■■□□□ 1.36
TRIM46-208ENST00000474430 RAB3GAP2Q9H2M9 1393 aa23.55■■□□□ 1.36
TRIM46-208ENST00000474430 ITSN2Q9NZM3 1697 aa23.54■■□□□ 1.36
TRIM46-208ENST00000474430 GPATCH8Q9UKJ3 1502 aaKnown RBP23.52■■□□□ 1.36
TRIM46-208ENST00000474430 PTPRKQ15262 1439 aa23.51■■□□□ 1.35
TRIM46-208ENST00000474430 DHX57Q6P158 1386 aaKnown RBP23.51■■□□□ 1.35
TRIM46-208ENST00000474430 ABCC10Q5T3U5 1492 aa23.5■■□□□ 1.35
TRIM46-208ENST00000474430 CFDP1Q9UEE9 299 aaPredicted RBP23.49■■□□□ 1.35
TRIM46-208ENST00000474430 KDM5BQ9UGL1 1544 aa23.47■■□□□ 1.35
TRIM46-208ENST00000474430 HFM1A2PYH4 1435 aa23.46■■□□□ 1.35
TRIM46-208ENST00000474430 SCAF1Q9H7N4 1312 aaKnown RBP23.46■■□□□ 1.35
TRIM46-208ENST00000474430 ZCCHC11Q5TAX3 1644 aaKnown RBP23.44■■□□□ 1.34
TRIM46-208ENST00000474430 CAMSAP2Q08AD1 1489 aa23.43■■□□□ 1.34
TRIM46-208ENST00000474430 CDC42BPAQ5VT25 1732 aa23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms