RNA–Protein interactions for RNA: ENST00000473783.5

SSBP1-209, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 5

Gene SSBP1, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-209ENST00000473783 PRG4Q92954 1404 aaPredicted RBP19.65■□□□□ 0.74
SSBP1-209ENST00000473783 NPM1P06748 294 aaKnown RBP eCLIP19.62■□□□□ 0.73
SSBP1-209ENST00000473783 TSPOAP1O95153 1857 aa19.61■□□□□ 0.73
SSBP1-209ENST00000473783 CHIC1Q5VXU3 224 aa19.61■□□□□ 0.73
SSBP1-209ENST00000473783 ADCY10Q96PN6 1610 aa19.57■□□□□ 0.72
SSBP1-209ENST00000473783 WRNQ14191 1432 aaPredicted RBP eCLIP19.56■□□□□ 0.72
SSBP1-209ENST00000473783 ERICH3Q5RHP9 1530 aa19.56■□□□□ 0.72
SSBP1-209ENST00000473783 JPH4Q96JJ6 628 aa19.55■□□□□ 0.72
SSBP1-209ENST00000473783 ADGRL1O94910 1474 aa19.51■□□□□ 0.71
SSBP1-209ENST00000473783 HECW2Q9P2P5 1572 aa19.51■□□□□ 0.71
SSBP1-209ENST00000473783 RUSC2Q8N2Y8 1516 aa19.51■□□□□ 0.71
SSBP1-209ENST00000473783 BIVM-ERCC5R4GMW8 1640 aa19.44■□□□□ 0.7
SSBP1-209ENST00000473783 TOP2BQ02880 1626 aa19.43■□□□□ 0.7
SSBP1-209ENST00000473783 PPRC1Q5VV67 1664 aaKnown RBP19.4■□□□□ 0.7
SSBP1-209ENST00000473783 GLI2P10070 1586 aa19.35■□□□□ 0.69
SSBP1-209ENST00000473783 FBXO41Q8TF61 875 aa19.33■□□□□ 0.68
SSBP1-209ENST00000473783 KIAA0586Q9BVV6 1533 aa19.3■□□□□ 0.68
SSBP1-209ENST00000473783 PLB1Q6P1J6 1458 aa19.29■□□□□ 0.68
SSBP1-209ENST00000473783 ABCC2Q92887 1545 aa19.28■□□□□ 0.68
SSBP1-209ENST00000473783 ASXL2Q76L83 1435 aa19.26■□□□□ 0.67
SSBP1-209ENST00000473783 COL17A1Q9UMD9 1497 aaPredicted RBP19.26■□□□□ 0.67
SSBP1-209ENST00000473783 PTPRGP23470 1445 aa19.24■□□□□ 0.67
SSBP1-209ENST00000473783 MAP3K4Q9Y6R4 1608 aa19.22■□□□□ 0.67
SSBP1-209ENST00000473783 TEX14Q8IWB6 1497 aa19.22■□□□□ 0.67
SSBP1-209ENST00000473783 CUL7Q14999 1698 aa19.21■□□□□ 0.67
SSBP1-209ENST00000473783 UHRF1BP1LA0JNW5 1464 aa19.16■□□□□ 0.66
SSBP1-209ENST00000473783 EPRSP07814 1512 aaKnown RBP19.15■□□□□ 0.66
SSBP1-209ENST00000473783 TNIKQ9UKE5 1360 aa19.15■□□□□ 0.66
SSBP1-209ENST00000473783 CARMIL2Q6F5E8 1435 aa19.14■□□□□ 0.65
SSBP1-209ENST00000473783 UACAQ9BZF9 1416 aa19.08■□□□□ 0.65
SSBP1-209ENST00000473783 TTBK1Q5TCY1 1321 aaPredicted RBP19.08■□□□□ 0.65
SSBP1-209ENST00000473783 KDM5BQ9UGL1 1544 aa19.08■□□□□ 0.64
SSBP1-209ENST00000473783 LMTK3Q96Q04 1460 aa19.05■□□□□ 0.64
SSBP1-209ENST00000473783 IGF1RP08069 1367 aa19.05■□□□□ 0.64
SSBP1-209ENST00000473783 ZCCHC11Q5TAX3 1644 aaKnown RBP19.04■□□□□ 0.64
SSBP1-209ENST00000473783 IQGAP2Q13576 1575 aa19.02■□□□□ 0.64
SSBP1-209ENST00000473783 KIF21BO75037 1637 aa19.01■□□□□ 0.63
SSBP1-209ENST00000473783 KIF27Q86VH2 1401 aa19■□□□□ 0.63
SSBP1-209ENST00000473783 CFAP43Q8NDM7 1665 aa18.98■□□□□ 0.63
SSBP1-209ENST00000473783 WDR7Q9Y4E6 1490 aa18.97■□□□□ 0.63
SSBP1-209ENST00000473783 MAGI3Q5TCQ9 1506 aa18.97■□□□□ 0.63
SSBP1-209ENST00000473783 DISP1Q96F81 1524 aa18.96■□□□□ 0.63
SSBP1-209ENST00000473783 PTPRMP28827 1452 aa18.93■□□□□ 0.62
SSBP1-209ENST00000473783 ADAMTSL3P82987 1691 aa18.92■□□□□ 0.62
SSBP1-209ENST00000473783 CARMIL1Q5VZK9 1371 aa18.92■□□□□ 0.62
SSBP1-209ENST00000473783 CD109Q6YHK3 1445 aa18.91■□□□□ 0.62
SSBP1-209ENST00000473783 PCF11O94913 1555 aaKnown RBP18.91■□□□□ 0.62
SSBP1-209ENST00000473783 UGGT2Q9NYU1 1516 aa18.87■□□□□ 0.61
SSBP1-209ENST00000473783 SUPT5HO00267 1087 aaKnown RBP18.86■□□□□ 0.61
SSBP1-209ENST00000473783 KIAA0556O60303 1618 aa18.85■□□□□ 0.61
SSBP1-209ENST00000473783 ARAP3Q8WWN8 1544 aa18.85■□□□□ 0.61
SSBP1-209ENST00000473783 SOCS7O14512 581 aa18.85■□□□□ 0.61
SSBP1-209ENST00000473783 BCORL1Q5H9F3 1711 aa18.8■□□□□ 0.6
SSBP1-209ENST00000473783 MADDQ8WXG6 1647 aa18.78■□□□□ 0.6
SSBP1-209ENST00000473783 DISP3Q9P2K9 1392 aa18.78■□□□□ 0.6
SSBP1-209ENST00000473783 ILDR2Q71H61 639 aa18.77■□□□□ 0.6
SSBP1-209ENST00000473783 KCNH8Q96L42 1107 aa18.76■□□□□ 0.59
SSBP1-209ENST00000473783 CERKQ8TCT0 537 aa18.74■□□□□ 0.59
SSBP1-209ENST00000473783 PHLDB1Q86UU1 1377 aa18.73■□□□□ 0.59
SSBP1-209ENST00000473783 ABCA8O94911 1581 aa18.72■□□□□ 0.59
SSBP1-209ENST00000473783 RIMS1Q86UR5 1692 aaKnown RBP18.7■□□□□ 0.58
SSBP1-209ENST00000473783 RAPGEF2Q9Y4G8 1499 aa18.68■□□□□ 0.58
SSBP1-209ENST00000473783 ABCA9Q8IUA7 1624 aa18.67■□□□□ 0.58
SSBP1-209ENST00000473783 GOLGA3Q08378 1498 aa18.65■□□□□ 0.58
SSBP1-209ENST00000473783 HSPA2P54652 639 aa18.65■□□□□ 0.58
SSBP1-209ENST00000473783 ARID4BQ4LE39 1312 aaPredicted RBP18.65■□□□□ 0.58
SSBP1-209ENST00000473783 FRMPD1Q5SYB0 1578 aa18.64■□□□□ 0.58
SSBP1-209ENST00000473783 SPATA31D1Q6ZQQ2 1576 aa18.64■□□□□ 0.58
SSBP1-209ENST00000473783 CTTNBP2Q8WZ74 1663 aa18.64■□□□□ 0.57
SSBP1-209ENST00000473783 NEO1Q92859 1461 aa18.64■□□□□ 0.57
SSBP1-209ENST00000473783 RAPGEF3O95398 923 aa18.62■□□□□ 0.57
SSBP1-209ENST00000473783 ARHGEF40Q8TER5 1519 aa18.61■□□□□ 0.57
SSBP1-209ENST00000473783 POGZQ7Z3K3 1410 aa18.54■□□□□ 0.56
SSBP1-209ENST00000473783 FANCAO15360 1455 aa18.53■□□□□ 0.56
SSBP1-209ENST00000473783 RICTORQ6R327 1708 aa18.53■□□□□ 0.56
SSBP1-209ENST00000473783 ATP10BO94823 1461 aa18.52■□□□□ 0.56
SSBP1-209ENST00000473783 TTC37Q6PGP7 1564 aa18.51■□□□□ 0.55
SSBP1-209ENST00000473783 FER1L4A9Z1Z3 1794 aa18.5■□□□□ 0.55
SSBP1-209ENST00000473783 PREX1Q8TCU6 1659 aa18.49■□□□□ 0.55
SSBP1-209ENST00000473783 DENND4BO75064 1496 aaPredicted RBP18.47■□□□□ 0.55
SSBP1-209ENST00000473783 FAM9AQ8IZU1 332 aaPredicted RBP18.47■□□□□ 0.55
SSBP1-209ENST00000473783 AKNAQ7Z591 1439 aa18.47■□□□□ 0.55
SSBP1-209ENST00000473783 PLPPR3Q6T4P5 718 aa18.46■□□□□ 0.55
SSBP1-209ENST00000473783 FHOD3Q2V2M9 1422 aa18.46■□□□□ 0.55
SSBP1-209ENST00000473783 YEATS2Q9ULM3 1422 aa18.46■□□□□ 0.55
SSBP1-209ENST00000473783 SIGLEC1Q9BZZ2 1709 aa18.46■□□□□ 0.55
SSBP1-209ENST00000473783 ZMYM4Q5VZL5 1548 aa18.45■□□□□ 0.54
SSBP1-209ENST00000473783 ARID3CA6NKF2 412 aa18.45■□□□□ 0.54
SSBP1-209ENST00000473783 DMRT2Q9Y5R5 561 aa18.45■□□□□ 0.54
SSBP1-209ENST00000473783 STRCQ7RTU9 1775 aa18.45■□□□□ 0.54
SSBP1-209ENST00000473783 EFCAB5A4FU69 1503 aa18.44■□□□□ 0.54
SSBP1-209ENST00000473783 CFAP74Q9C0B2 1584 aa18.44■□□□□ 0.54
SSBP1-209ENST00000473783 ZFYVE16Q7Z3T8 1539 aa18.42■□□□□ 0.54
SSBP1-209ENST00000473783 MAGI2Q86UL8 1455 aa18.39■□□□□ 0.54
SSBP1-209ENST00000473783 SETD1BQ9UPS6 1966 aaKnown RBP18.39■□□□□ 0.53
SSBP1-209ENST00000473783 RAPGEF6Q8TEU7 1601 aa18.38■□□□□ 0.53
SSBP1-209ENST00000473783 IQSEC2Q5JU85 1478 aa18.37■□□□□ 0.53
SSBP1-209ENST00000473783 ARHGEF12Q9NZN5 1544 aa18.37■□□□□ 0.53
SSBP1-209ENST00000473783 PTPRTO14522 1441 aa18.33■□□□□ 0.53
SSBP1-209ENST00000473783 MLECQ14165 292 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms