RNA–Protein interactions for RNA: ENST00000473645.6

PDCD10-208, Transcript of programmed cell death 10, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDCD10, Length 1,360 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD10-208ENST00000473645 PBRM1Q86U86 1689 aa17.41■□□□□ 0.38
PDCD10-208ENST00000473645 WRNQ14191 1432 aaPredicted RBP eCLIP17.4■□□□□ 0.38
PDCD10-208ENST00000473645 ABCA5Q8WWZ7 1642 aa17.39■□□□□ 0.37
PDCD10-208ENST00000473645 RNF216Q9NWF9 866 aaPredicted RBP17.39■□□□□ 0.37
PDCD10-208ENST00000473645 NCBP3Q53F19 620 aaKnown RBP17.35■□□□□ 0.37
PDCD10-208ENST00000473645 TOP2BQ02880 1626 aa17.32■□□□□ 0.36
PDCD10-208ENST00000473645 BIVM-ERCC5R4GMW8 1640 aa17.31■□□□□ 0.36
PDCD10-208ENST00000473645 GRIN2AQ12879 1464 aa17.3■□□□□ 0.36
PDCD10-208ENST00000473645 ADAMTS12P58397 1594 aa17.26■□□□□ 0.35
PDCD10-208ENST00000473645 FHAD1B1AJZ9 1412 aa17.26■□□□□ 0.35
PDCD10-208ENST00000473645 NUP160Q12769 1436 aa17.26■□□□□ 0.35
PDCD10-208ENST00000473645 CEP170Q5SW79 1584 aa17.23■□□□□ 0.35
PDCD10-208ENST00000473645 ERICH3Q5RHP9 1530 aa17.22■□□□□ 0.35
PDCD10-208ENST00000473645 ERCC6L2Q5T890 1561 aa17.21■□□□□ 0.35
PDCD10-208ENST00000473645 DCAF8L1A6NGE4 600 aa17.21■□□□□ 0.35
PDCD10-208ENST00000473645 SHROOM2Q13796 1616 aa17.16■□□□□ 0.34
PDCD10-208ENST00000473645 JPH4Q96JJ6 628 aa17.15■□□□□ 0.34
PDCD10-208ENST00000473645 NPM3O75607 178 aaKnown RBP17.13■□□□□ 0.33
PDCD10-208ENST00000473645 PRG4Q92954 1404 aaPredicted RBP17.11■□□□□ 0.33
PDCD10-208ENST00000473645 IGF1RP08069 1367 aa17.06■□□□□ 0.32
PDCD10-208ENST00000473645 KIF27Q86VH2 1401 aa17.02■□□□□ 0.31
PDCD10-208ENST00000473645 KCNA4P22459 653 aa17.02■□□□□ 0.31
PDCD10-208ENST00000473645 RUSC2Q8N2Y8 1516 aa17■□□□□ 0.31
PDCD10-208ENST00000473645 KIAA0586Q9BVV6 1533 aa16.98■□□□□ 0.31
PDCD10-208ENST00000473645 NPM1P06748 294 aaKnown RBP eCLIP16.97■□□□□ 0.31
PDCD10-208ENST00000473645 CUL7Q14999 1698 aa16.94■□□□□ 0.3
PDCD10-208ENST00000473645 CARMIL1Q5VZK9 1371 aa16.93■□□□□ 0.3
PDCD10-208ENST00000473645 KIF13AQ9H1H9 1805 aa16.93■□□□□ 0.3
PDCD10-208ENST00000473645 FAM69CQ0P6D2 419 aa16.91■□□□□ 0.3
PDCD10-208ENST00000473645 ABCC10Q5T3U5 1492 aa16.89■□□□□ 0.29
PDCD10-208ENST00000473645 ADCY10Q96PN6 1610 aa16.88■□□□□ 0.29
PDCD10-208ENST00000473645 MAPKBP1O60336 1514 aa16.87■□□□□ 0.29
PDCD10-208ENST00000473645 PTPRGP23470 1445 aa16.85■□□□□ 0.29
PDCD10-208ENST00000473645 RNF39Q9H2S5 420 aa16.81■□□□□ 0.28
PDCD10-208ENST00000473645 TTBK1Q5TCY1 1321 aaPredicted RBP16.81■□□□□ 0.28
PDCD10-208ENST00000473645 CARMIL2Q6F5E8 1435 aa16.81■□□□□ 0.28
PDCD10-208ENST00000473645 TNIKQ9UKE5 1360 aa16.8■□□□□ 0.28
PDCD10-208ENST00000473645 DIP2BQ9P265 1576 aa16.8■□□□□ 0.28
PDCD10-208ENST00000473645 IQGAP2Q13576 1575 aa16.77■□□□□ 0.28
PDCD10-208ENST00000473645 RAPGEF2Q9Y4G8 1499 aa16.74■□□□□ 0.27
PDCD10-208ENST00000473645 ABCC2Q92887 1545 aa16.73■□□□□ 0.27
PDCD10-208ENST00000473645 DISP1Q96F81 1524 aa16.72■□□□□ 0.27
PDCD10-208ENST00000473645 UHRF1BP1LA0JNW5 1464 aa16.7■□□□□ 0.26
PDCD10-208ENST00000473645 TSPOAP1O95153 1857 aa16.7■□□□□ 0.26
PDCD10-208ENST00000473645 UACAQ9BZF9 1416 aa16.7■□□□□ 0.26
PDCD10-208ENST00000473645 CACNB1Q02641 598 aaPredicted RBP16.7■□□□□ 0.26
PDCD10-208ENST00000473645 ASXL2Q76L83 1435 aa16.69■□□□□ 0.26
PDCD10-208ENST00000473645 PLB1Q6P1J6 1458 aa16.69■□□□□ 0.26
PDCD10-208ENST00000473645 UGGT2Q9NYU1 1516 aa16.68■□□□□ 0.26
PDCD10-208ENST00000473645 KDM6BO15054 1643 aa16.67■□□□□ 0.26
PDCD10-208ENST00000473645 GLI2P10070 1586 aa16.63■□□□□ 0.25
PDCD10-208ENST00000473645 KDM5BQ9UGL1 1544 aa16.63■□□□□ 0.25
PDCD10-208ENST00000473645 KDM4FA0A1W2PPD8 638 aa16.61■□□□□ 0.25
PDCD10-208ENST00000473645 KIAA0556O60303 1618 aa16.6■□□□□ 0.25
PDCD10-208ENST00000473645 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.6■□□□□ 0.25
PDCD10-208ENST00000473645 EPRSP07814 1512 aaKnown RBP16.58■□□□□ 0.24
PDCD10-208ENST00000473645 PPRC1Q5VV67 1664 aaKnown RBP16.57■□□□□ 0.24
PDCD10-208ENST00000473645 C1QBPQ07021 282 aaKnown RBP16.56■□□□□ 0.24
PDCD10-208ENST00000473645 PRXQ9BXM0 1461 aa16.56■□□□□ 0.24
PDCD10-208ENST00000473645 ZCCHC11Q5TAX3 1644 aaKnown RBP16.56■□□□□ 0.24
PDCD10-208ENST00000473645 GOLGA3Q08378 1498 aa16.55■□□□□ 0.24
PDCD10-208ENST00000473645 CTTNBP2Q8WZ74 1663 aa16.54■□□□□ 0.24
PDCD10-208ENST00000473645 MAP3K4Q9Y6R4 1608 aa16.52■□□□□ 0.24
PDCD10-208ENST00000473645 COL17A1Q9UMD9 1497 aaPredicted RBP16.52■□□□□ 0.24
PDCD10-208ENST00000473645 WDR7Q9Y4E6 1490 aa16.5■□□□□ 0.23
PDCD10-208ENST00000473645 TEX14Q8IWB6 1497 aa16.5■□□□□ 0.23
PDCD10-208ENST00000473645 KCNH8Q96L42 1107 aa16.49■□□□□ 0.23
PDCD10-208ENST00000473645 ABCA8O94911 1581 aa16.48■□□□□ 0.23
PDCD10-208ENST00000473645 CSRNP3Q8WYN3 585 aa16.47■□□□□ 0.23
PDCD10-208ENST00000473645 FAM9AQ8IZU1 332 aaPredicted RBP16.46■□□□□ 0.23
PDCD10-208ENST00000473645 P3H3Q8IVL6 736 aa16.45■□□□□ 0.22
PDCD10-208ENST00000473645 CD109Q6YHK3 1445 aa16.44■□□□□ 0.22
PDCD10-208ENST00000473645 MAGI3Q5TCQ9 1506 aa16.41■□□□□ 0.22
PDCD10-208ENST00000473645 ADGRL1O94910 1474 aa16.41■□□□□ 0.22
PDCD10-208ENST00000473645 ARID3CA6NKF2 412 aa16.4■□□□□ 0.22
PDCD10-208ENST00000473645 ATP10BO94823 1461 aa16.38■□□□□ 0.21
PDCD10-208ENST00000473645 CFAP43Q8NDM7 1665 aa16.38■□□□□ 0.21
PDCD10-208ENST00000473645 EEA1Q15075 1411 aa16.33■□□□□ 0.2
PDCD10-208ENST00000473645 SAMD9Q5K651 1589 aa16.33■□□□□ 0.2
PDCD10-208ENST00000473645 SLC4A2P04920 1241 aa16.32■□□□□ 0.2
PDCD10-208ENST00000473645 RANGAP1P46060 587 aaPredicted RBP16.31■□□□□ 0.2
PDCD10-208ENST00000473645 U3KPZ7 1027 aaPredicted RBP16.31■□□□□ 0.2
PDCD10-208ENST00000473645 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.3■□□□□ 0.2
PDCD10-208ENST00000473645 HNRNPUL2Q1KMD3 747 aaKnown RBP16.3■□□□□ 0.2
PDCD10-208ENST00000473645 ARAP3Q8WWN8 1544 aa16.3■□□□□ 0.2
PDCD10-208ENST00000473645 RAPGEF6Q8TEU7 1601 aa16.28■□□□□ 0.2
PDCD10-208ENST00000473645 PHLDB1Q86UU1 1377 aa16.28■□□□□ 0.2
PDCD10-208ENST00000473645 ABCA9Q8IUA7 1624 aa16.26■□□□□ 0.19
PDCD10-208ENST00000473645 NUP153P49790 1475 aaKnown RBP16.25■□□□□ 0.19
PDCD10-208ENST00000473645 RAPGEF3O95398 923 aa16.24■□□□□ 0.19
PDCD10-208ENST00000473645 FHOD3Q2V2M9 1422 aa16.24■□□□□ 0.19
PDCD10-208ENST00000473645 PLEKHD1A6NEE1 506 aa16.23■□□□□ 0.19
PDCD10-208ENST00000473645 NEO1Q92859 1461 aa16.21■□□□□ 0.19
PDCD10-208ENST00000473645 KIF21BO75037 1637 aa16.2■□□□□ 0.18
PDCD10-208ENST00000473645 HECW2Q9P2P5 1572 aa16.18■□□□□ 0.18
PDCD10-208ENST00000473645 EFCAB5A4FU69 1503 aa16.16■□□□□ 0.18
PDCD10-208ENST00000473645 UBTFP17480 764 aaKnown RBP16.14■□□□□ 0.17
PDCD10-208ENST00000473645 ILDR1Q86SU0 546 aaPredicted RBP16.14■□□□□ 0.17
PDCD10-208ENST00000473645 EHMT2Q96KQ7 1210 aa16.13■□□□□ 0.17
PDCD10-208ENST00000473645 AKNAQ7Z591 1439 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms