RNA–Protein interactions for RNA: ENST00000473458.5

SGSM1-204, Transcript of small G protein signaling modulator 1, humanhuman

TSL 5

Gene SGSM1, Length 5,336 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGSM1-204ENST00000473458 TONSLQ96HA7 1378 aa16.61■□□□□ 0.25
SGSM1-204ENST00000473458 ANP32AP39687 249 aaKnown RBP16.6■□□□□ 0.25
SGSM1-204ENST00000473458 FMN1Q68DA7 1419 aa16.59■□□□□ 0.25
SGSM1-204ENST00000473458 ANP32CO43423 234 aa16.58■□□□□ 0.24
SGSM1-204ENST00000473458 MIER1Q8N108 512 aa16.58■□□□□ 0.24
SGSM1-204ENST00000473458 SLC4A1APQ9BWU0 796 aaKnown RBP16.58■□□□□ 0.24
SGSM1-204ENST00000473458 NEFMP07197 916 aa16.57■□□□□ 0.24
SGSM1-204ENST00000473458 FANCD2Q9BXW9 1451 aa16.56■□□□□ 0.24
SGSM1-204ENST00000473458 RAPGEF2Q9Y4G8 1499 aa16.53■□□□□ 0.24
SGSM1-204ENST00000473458 STAG3Q9UJ98 1225 aa16.51■□□□□ 0.23
SGSM1-204ENST00000473458 SUPT16HQ9Y5B9 1047 aaKnown RBP16.5■□□□□ 0.23
SGSM1-204ENST00000473458 PRKCSHP14314 528 aaPredicted RBP16.48■□□□□ 0.23
SGSM1-204ENST00000473458 NBR1Q14596 966 aa16.48■□□□□ 0.23
SGSM1-204ENST00000473458 ARID3CA6NKF2 412 aa16.46■□□□□ 0.23
SGSM1-204ENST00000473458 CCNB3Q8WWL7 1395 aa16.46■□□□□ 0.23
SGSM1-204ENST00000473458 SLC24A1O60721 1099 aa16.45■□□□□ 0.22
SGSM1-204ENST00000473458 VPS8Q8N3P4 1428 aa16.45■□□□□ 0.22
SGSM1-204ENST00000473458 CFDP1Q9UEE9 299 aaPredicted RBP16.43■□□□□ 0.22
SGSM1-204ENST00000473458 ZNF326Q5BKZ1 582 aaKnown RBP16.42■□□□□ 0.22
SGSM1-204ENST00000473458 KANK1Q14678 1352 aa16.4■□□□□ 0.22
SGSM1-204ENST00000473458 ARHGAP35Q9NRY4 1499 aa16.39■□□□□ 0.21
SGSM1-204ENST00000473458 TSHZ2Q9NRE2 1034 aa16.38■□□□□ 0.21
SGSM1-204ENST00000473458 DEKP35659 375 aaKnown RBP16.37■□□□□ 0.21
SGSM1-204ENST00000473458 ZBTB47Q9UFB7 747 aaPredicted RBP16.37■□□□□ 0.21
SGSM1-204ENST00000473458 RSPH4AQ5TD94 716 aa16.36■□□□□ 0.21
SGSM1-204ENST00000473458 TIMELESSQ9UNS1 1208 aa16.35■□□□□ 0.21
SGSM1-204ENST00000473458 CDCA8Q53HL2 280 aa16.34■□□□□ 0.21
SGSM1-204ENST00000473458 CFTRP13569 1480 aa16.34■□□□□ 0.21
SGSM1-204ENST00000473458 CCDC18Q5T9S5 1454 aa16.33■□□□□ 0.2
SGSM1-204ENST00000473458 MRC2Q9UBG0 1479 aa16.32■□□□□ 0.2
SGSM1-204ENST00000473458 CC2D2AQ9P2K1 1620 aa16.31■□□□□ 0.2
SGSM1-204ENST00000473458 ERICH6BQ5W0A0 696 aa16.31■□□□□ 0.2
SGSM1-204ENST00000473458 RBM19Q9Y4C8 960 aaKnown RBP16.3■□□□□ 0.2
SGSM1-204ENST00000473458 HDGFP51858 240 aaKnown RBP16.3■□□□□ 0.2
SGSM1-204ENST00000473458 IFT140Q96RY7 1462 aa16.29■□□□□ 0.2
SGSM1-204ENST00000473458 LAMC3Q9Y6N6 1575 aa16.29■□□□□ 0.2
SGSM1-204ENST00000473458 CHGAP10645 457 aaKnown RBP16.27■□□□□ 0.2
SGSM1-204ENST00000473458 GAPVD1Q14C86 1478 aa16.27■□□□□ 0.2
SGSM1-204ENST00000473458 PEG3Q9GZU2 1588 aa16.27■□□□□ 0.2
SGSM1-204ENST00000473458 FGD5Q6ZNL6 1462 aa16.27■□□□□ 0.19
SGSM1-204ENST00000473458 TDRD9Q8NDG6 1382 aaKnown RBP16.26■□□□□ 0.19
SGSM1-204ENST00000473458 KCNH8Q96L42 1107 aa16.26■□□□□ 0.19
SGSM1-204ENST00000473458 ERICH3Q5RHP9 1530 aa16.25■□□□□ 0.19
SGSM1-204ENST00000473458 CHIC2Q9UKJ5 165 aa16.24■□□□□ 0.19
SGSM1-204ENST00000473458 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.23■□□□□ 0.19
SGSM1-204ENST00000473458 GRIN2BQ13224 1484 aa16.22■□□□□ 0.19
SGSM1-204ENST00000473458 NPM2Q86SE8 214 aaKnown RBP16.22■□□□□ 0.19
SGSM1-204ENST00000473458 RTN4Q9NQC3 1192 aaKnown RBP16.22■□□□□ 0.19
SGSM1-204ENST00000473458 EFCAB2Q5VUJ9 269 aa16.21■□□□□ 0.19
SGSM1-204ENST00000473458 BICRAQ9NZM4 1560 aa16.21■□□□□ 0.18
SGSM1-204ENST00000473458 DNMBPQ6XZF7 1577 aa16.19■□□□□ 0.18
SGSM1-204ENST00000473458 KIF21BO75037 1637 aa16.19■□□□□ 0.18
SGSM1-204ENST00000473458 PPP1R15AO75807 674 aaPredicted RBP16.18■□□□□ 0.18
SGSM1-204ENST00000473458 ANKRD30AQ9BXX3 1397 aa16.18■□□□□ 0.18
SGSM1-204ENST00000473458 NOP58Q9Y2X3 529 aaKnown RBP16.18■□□□□ 0.18
SGSM1-204ENST00000473458 EIF4G2P78344 907 aaKnown RBP eCLIP16.17■□□□□ 0.18
SGSM1-204ENST00000473458 EFCAB5A4FU69 1503 aa16.16■□□□□ 0.18
SGSM1-204ENST00000473458 CUX1P39880 1505 aa16.16■□□□□ 0.18
SGSM1-204ENST00000473458 TOP2BQ02880 1626 aa16.15■□□□□ 0.18
SGSM1-204ENST00000473458 SETD5Q9C0A6 1442 aa16.13■□□□□ 0.17
SGSM1-204ENST00000473458 HNRNPUQ00839 825 aaKnown RBP eCLIP16.12■□□□□ 0.17
SGSM1-204ENST00000473458 RRP7BPQ9NSQ0 103 aa16.12■□□□□ 0.17
SGSM1-204ENST00000473458 CANXP27824 592 aaKnown RBP16.12■□□□□ 0.17
SGSM1-204ENST00000473458 JPH4Q96JJ6 628 aa16.1■□□□□ 0.17
SGSM1-204ENST00000473458 PTPRGP23470 1445 aa16.1■□□□□ 0.17
SGSM1-204ENST00000473458 ARID4BQ4LE39 1312 aaPredicted RBP16.09■□□□□ 0.17
SGSM1-204ENST00000473458 OSCARQ8IYS5 282 aa16.08■□□□□ 0.16
SGSM1-204ENST00000473458 PPM1GO15355 546 aaPredicted RBP16.07■□□□□ 0.16
SGSM1-204ENST00000473458 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.07■□□□□ 0.16
SGSM1-204ENST00000473458 DDX10Q13206 875 aaKnown RBP16.06■□□□□ 0.16
SGSM1-204ENST00000473458 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.06■□□□□ 0.16
SGSM1-204ENST00000473458 TOPBP1Q92547 1522 aa16.05■□□□□ 0.16
SGSM1-204ENST00000473458 CCDC136Q96JN2 1154 aa16.05■□□□□ 0.16
SGSM1-204ENST00000473458 IGF1RP08069 1367 aa16.05■□□□□ 0.16
SGSM1-204ENST00000473458 CNGB1Q14028 1251 aaPredicted RBP16.04■□□□□ 0.16
SGSM1-204ENST00000473458 CUL7Q14999 1698 aa16.04■□□□□ 0.16
SGSM1-204ENST00000473458 WDR43Q15061 677 aaKnown RBP eCLIP16.03■□□□□ 0.16
SGSM1-204ENST00000473458 CFAP53Q96M91 514 aa16.02■□□□□ 0.15
SGSM1-204ENST00000473458 FHOD3Q2V2M9 1422 aa16.01■□□□□ 0.15
SGSM1-204ENST00000473458 IRX6P78412 446 aaPredicted RBP16.01■□□□□ 0.15
SGSM1-204ENST00000473458 UACAQ9BZF9 1416 aa16■□□□□ 0.15
SGSM1-204ENST00000473458 UNC13AQ9UPW8 1703 aa15.99■□□□□ 0.15
SGSM1-204ENST00000473458 DDRGK1Q96HY6 314 aa15.98■□□□□ 0.15
SGSM1-204ENST00000473458 PPP4R2Q9NY27 417 aa15.98■□□□□ 0.15
SGSM1-204ENST00000473458 FYCO1Q9BQS8 1478 aa15.98■□□□□ 0.15
SGSM1-204ENST00000473458 EIF3AQ14152 1382 aaKnown RBP15.97■□□□□ 0.15
SGSM1-204ENST00000473458 PNNQ9H307 717 aaKnown RBP15.97■□□□□ 0.15
SGSM1-204ENST00000473458 TMC1Q8TDI8 760 aa15.97■□□□□ 0.15
SGSM1-204ENST00000473458 CASKIN1Q8WXD9 1431 aa15.96■□□□□ 0.15
SGSM1-204ENST00000473458 ABCA10Q8WWZ4 1543 aa15.96■□□□□ 0.15
SGSM1-204ENST00000473458 PLEKHH2Q8IVE3 1493 aa15.96■□□□□ 0.15
SGSM1-204ENST00000473458 ANP32BQ92688 251 aaKnown RBP15.95■□□□□ 0.14
SGSM1-204ENST00000473458 RAD54L2Q9Y4B4 1467 aa15.95■□□□□ 0.14
SGSM1-204ENST00000473458 KDM2AQ9Y2K7 1162 aa15.94■□□□□ 0.14
SGSM1-204ENST00000473458 SYNJ2O15056 1496 aa15.93■□□□□ 0.14
SGSM1-204ENST00000473458 SPAG9O60271 1321 aaKnown RBP15.93■□□□□ 0.14
SGSM1-204ENST00000473458 FANCIQ9NVI1 1328 aa15.93■□□□□ 0.14
SGSM1-204ENST00000473458 STAC3Q96MF2 364 aa15.93■□□□□ 0.14
SGSM1-204ENST00000473458 MYOM3Q5VTT5 1437 aa15.92■□□□□ 0.14
SGSM1-204ENST00000473458 CARD11Q9BXL7 1154 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms