RNA–Protein interactions for RNA: ENST00000473373.1

CPNE1-222, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-222ENST00000473373 RUSC2Q8N2Y8 1516 aa19.55■□□□□ 0.72
CPNE1-222ENST00000473373 IGF1RP08069 1367 aa19.55■□□□□ 0.72
CPNE1-222ENST00000473373 CARMIL1Q5VZK9 1371 aa19.52■□□□□ 0.72
CPNE1-222ENST00000473373 PRG4Q92954 1404 aaPredicted RBP19.49■□□□□ 0.71
CPNE1-222ENST00000473373 JPH4Q96JJ6 628 aa19.48■□□□□ 0.71
CPNE1-222ENST00000473373 KIAA0586Q9BVV6 1533 aa19.43■□□□□ 0.7
CPNE1-222ENST00000473373 RAPGEF2Q9Y4G8 1499 aa19.4■□□□□ 0.7
CPNE1-222ENST00000473373 IQGAP2Q13576 1575 aa19.39■□□□□ 0.69
CPNE1-222ENST00000473373 FAM69CQ0P6D2 419 aa19.38■□□□□ 0.69
CPNE1-222ENST00000473373 CTTNBP2Q8WZ74 1663 aa19.38■□□□□ 0.69
CPNE1-222ENST00000473373 KIF13AQ9H1H9 1805 aa19.38■□□□□ 0.69
CPNE1-222ENST00000473373 TTBK1Q5TCY1 1321 aaPredicted RBP19.37■□□□□ 0.69
CPNE1-222ENST00000473373 NPM1P06748 294 aaKnown RBP eCLIP19.37■□□□□ 0.69
CPNE1-222ENST00000473373 CARMIL2Q6F5E8 1435 aa19.33■□□□□ 0.68
CPNE1-222ENST00000473373 ABCC10Q5T3U5 1492 aa19.29■□□□□ 0.68
CPNE1-222ENST00000473373 ADCY10Q96PN6 1610 aa19.23■□□□□ 0.67
CPNE1-222ENST00000473373 FAM9AQ8IZU1 332 aaPredicted RBP19.23■□□□□ 0.67
CPNE1-222ENST00000473373 PTPRGP23470 1445 aa19.23■□□□□ 0.67
CPNE1-222ENST00000473373 MAPKBP1O60336 1514 aa19.22■□□□□ 0.67
CPNE1-222ENST00000473373 TNIKQ9UKE5 1360 aa19.21■□□□□ 0.67
CPNE1-222ENST00000473373 DIP2BQ9P265 1576 aa19.21■□□□□ 0.67
CPNE1-222ENST00000473373 EEA1Q15075 1411 aa19.2■□□□□ 0.66
CPNE1-222ENST00000473373 CSRNP3Q8WYN3 585 aa19.2■□□□□ 0.66
CPNE1-222ENST00000473373 PRXQ9BXM0 1461 aa19.19■□□□□ 0.66
CPNE1-222ENST00000473373 UGGT2Q9NYU1 1516 aa19.19■□□□□ 0.66
CPNE1-222ENST00000473373 KIAA0556O60303 1618 aa19.18■□□□□ 0.66
CPNE1-222ENST00000473373 KDM4FA0A1W2PPD8 638 aa19.16■□□□□ 0.66
CPNE1-222ENST00000473373 DISP1Q96F81 1524 aa19.15■□□□□ 0.66
CPNE1-222ENST00000473373 GOLGA3Q08378 1498 aa19.15■□□□□ 0.66
CPNE1-222ENST00000473373 KDM6BO15054 1643 aa19.14■□□□□ 0.65
CPNE1-222ENST00000473373 TSPOAP1O95153 1857 aa19.13■□□□□ 0.65
CPNE1-222ENST00000473373 RANGAP1P46060 587 aaPredicted RBP19.09■□□□□ 0.65
CPNE1-222ENST00000473373 EHMT2Q96KQ7 1210 aa19.08■□□□□ 0.64
CPNE1-222ENST00000473373 UACAQ9BZF9 1416 aa19.08■□□□□ 0.64
CPNE1-222ENST00000473373 ABCC2Q92887 1545 aa19.06■□□□□ 0.64
CPNE1-222ENST00000473373 KIF21BO75037 1637 aa19.06■□□□□ 0.64
CPNE1-222ENST00000473373 P3H3Q8IVL6 736 aa19.04■□□□□ 0.64
CPNE1-222ENST00000473373 ZCCHC11Q5TAX3 1644 aaKnown RBP19.03■□□□□ 0.64
CPNE1-222ENST00000473373 UHRF1BP1LA0JNW5 1464 aa19.02■□□□□ 0.63
CPNE1-222ENST00000473373 ASXL2Q76L83 1435 aa19.01■□□□□ 0.63
CPNE1-222ENST00000473373 UBTFP17480 764 aaKnown RBP18.98■□□□□ 0.63
CPNE1-222ENST00000473373 PLB1Q6P1J6 1458 aa18.97■□□□□ 0.63
CPNE1-222ENST00000473373 SAMD9Q5K651 1589 aa18.96■□□□□ 0.63
CPNE1-222ENST00000473373 KDM5BQ9UGL1 1544 aa18.94■□□□□ 0.62
CPNE1-222ENST00000473373 ABCA8O94911 1581 aa18.93■□□□□ 0.62
CPNE1-222ENST00000473373 GLI2P10070 1586 aa18.93■□□□□ 0.62
CPNE1-222ENST00000473373 PPRC1Q5VV67 1664 aaKnown RBP18.92■□□□□ 0.62
CPNE1-222ENST00000473373 ARID3CA6NKF2 412 aa18.91■□□□□ 0.62
CPNE1-222ENST00000473373 RAPGEF6Q8TEU7 1601 aa18.9■□□□□ 0.62
CPNE1-222ENST00000473373 ILDR1Q86SU0 546 aaPredicted RBP18.9■□□□□ 0.62
CPNE1-222ENST00000473373 COL17A1Q9UMD9 1497 aaPredicted RBP18.9■□□□□ 0.62
CPNE1-222ENST00000473373 ADGRL1O94910 1474 aa18.89■□□□□ 0.61
CPNE1-222ENST00000473373 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.88■□□□□ 0.61
CPNE1-222ENST00000473373 HNRNPUL2Q1KMD3 747 aaKnown RBP18.88■□□□□ 0.61
CPNE1-222ENST00000473373 EFCAB5A4FU69 1503 aa18.88■□□□□ 0.61
CPNE1-222ENST00000473373 EPRSP07814 1512 aaKnown RBP18.88■□□□□ 0.61
CPNE1-222ENST00000473373 FHOD3Q2V2M9 1422 aa18.87■□□□□ 0.61
CPNE1-222ENST00000473373 WDR7Q9Y4E6 1490 aa18.85■□□□□ 0.61
CPNE1-222ENST00000473373 KCNH8Q96L42 1107 aa18.84■□□□□ 0.61
CPNE1-222ENST00000473373 MAP3K4Q9Y6R4 1608 aa18.82■□□□□ 0.6
CPNE1-222ENST00000473373 TEX14Q8IWB6 1497 aa18.8■□□□□ 0.6
CPNE1-222ENST00000473373 CFAP43Q8NDM7 1665 aa18.79■□□□□ 0.6
CPNE1-222ENST00000473373 ATP1B4Q9UN42 357 aaPredicted RBP18.78■□□□□ 0.6
CPNE1-222ENST00000473373 ATP10BO94823 1461 aa18.76■□□□□ 0.59
CPNE1-222ENST00000473373 CD109Q6YHK3 1445 aa18.72■□□□□ 0.59
CPNE1-222ENST00000473373 NUP153P49790 1475 aaKnown RBP18.71■□□□□ 0.59
CPNE1-222ENST00000473373 HECW1Q76N89 1606 aa18.71■□□□□ 0.58
CPNE1-222ENST00000473373 FMN1Q68DA7 1419 aa18.7■□□□□ 0.58
CPNE1-222ENST00000473373 HECW2Q9P2P5 1572 aa18.7■□□□□ 0.58
CPNE1-222ENST00000473373 ARHGAP35Q9NRY4 1499 aa18.7■□□□□ 0.58
CPNE1-222ENST00000473373 PLEKHD1A6NEE1 506 aa18.67■□□□□ 0.58
CPNE1-222ENST00000473373 MAGI3Q5TCQ9 1506 aa18.65■□□□□ 0.58
CPNE1-222ENST00000473373 ABCA9Q8IUA7 1624 aa18.65■□□□□ 0.58
CPNE1-222ENST00000473373 CDK13Q14004 1512 aaKnown RBP18.64■□□□□ 0.57
CPNE1-222ENST00000473373 CLIP1P30622 1438 aa18.58■□□□□ 0.57
CPNE1-222ENST00000473373 CDK11AQ9UQ88 783 aaPredicted RBP18.58■□□□□ 0.56
CPNE1-222ENST00000473373 LRRIQ1Q96JM4 1722 aa18.57■□□□□ 0.56
CPNE1-222ENST00000473373 PCF11O94913 1555 aaKnown RBP18.57■□□□□ 0.56
CPNE1-222ENST00000473373 CFAP74Q9C0B2 1584 aa18.55■□□□□ 0.56
CPNE1-222ENST00000473373 TTC37Q6PGP7 1564 aa18.53■□□□□ 0.56
CPNE1-222ENST00000473373 MYO5CQ9NQX4 1742 aa18.53■□□□□ 0.56
CPNE1-222ENST00000473373 KIF14Q15058 1648 aa18.52■□□□□ 0.56
CPNE1-222ENST00000473373 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.52■□□□□ 0.56
CPNE1-222ENST00000473373 ARAP3Q8WWN8 1544 aa18.52■□□□□ 0.56
CPNE1-222ENST00000473373 RAPGEF3O95398 923 aa18.51■□□□□ 0.55
CPNE1-222ENST00000473373 CCDC18Q5T9S5 1454 aa18.51■□□□□ 0.55
CPNE1-222ENST00000473373 NEO1Q92859 1461 aa18.49■□□□□ 0.55
CPNE1-222ENST00000473373 CASKIN1Q8WXD9 1431 aa18.49■□□□□ 0.55
CPNE1-222ENST00000473373 PHLDB1Q86UU1 1377 aa18.48■□□□□ 0.55
CPNE1-222ENST00000473373 FYCO1Q9BQS8 1478 aa18.47■□□□□ 0.55
CPNE1-222ENST00000473373 FANCAO15360 1455 aa18.46■□□□□ 0.55
CPNE1-222ENST00000473373 CEP162Q5TB80 1403 aa18.45■□□□□ 0.54
CPNE1-222ENST00000473373 ARID4BQ4LE39 1312 aaPredicted RBP18.45■□□□□ 0.54
CPNE1-222ENST00000473373 TROQ12816 1431 aaPredicted RBP18.44■□□□□ 0.54
CPNE1-222ENST00000473373 PTPRMP28827 1452 aa18.44■□□□□ 0.54
CPNE1-222ENST00000473373 FBXO41Q8TF61 875 aa18.42■□□□□ 0.54
CPNE1-222ENST00000473373 AKNAQ7Z591 1439 aa18.41■□□□□ 0.54
CPNE1-222ENST00000473373 ARHGAP5Q13017 1502 aa18.41■□□□□ 0.54
CPNE1-222ENST00000473373 RICTORQ6R327 1708 aa18.4■□□□□ 0.54
CPNE1-222ENST00000473373 LOC105371045A0A1W2PR82 267 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms