RNA–Protein interactions for RNA: ENST00000473064.1

CNOT10-213, Transcript of CCR4-NOT transcription complex subunit 10, humanhuman

TSL 3

Gene CNOT10, Length 530 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT10-213ENST00000473064 PKD2Q13563 968 aa9.74□□□□□ -0.85
CNOT10-213ENST00000473064 CHADLQ6NUI6 762 aa9.73□□□□□ -0.85
CNOT10-213ENST00000473064 ZBTB47Q9UFB7 747 aaPredicted RBP9.73□□□□□ -0.85
CNOT10-213ENST00000473064 CHRDL2Q6WN34 429 aa9.72□□□□□ -0.85
CNOT10-213ENST00000473064 BAZ1AQ9NRL2 1556 aaPredicted RBP9.71□□□□□ -0.85
CNOT10-213ENST00000473064 SMARCA2P51531 1590 aa9.7□□□□□ -0.86
CNOT10-213ENST00000473064 FXR2P51116 673 aaKnown RBP eCLIP9.69□□□□□ -0.86
CNOT10-213ENST00000473064 NUBP1P53384 320 aa9.69□□□□□ -0.86
CNOT10-213ENST00000473064 KIF21AQ7Z4S6 1674 aa9.68□□□□□ -0.86
CNOT10-213ENST00000473064 PRKAR2AP13861 404 aaKnown RBP9.66□□□□□ -0.86
CNOT10-213ENST00000473064 PIP4P2Q8N4L2 257 aa9.66□□□□□ -0.86
CNOT10-213ENST00000473064 DCAF1Q9Y4B6 1507 aa9.66□□□□□ -0.86
CNOT10-213ENST00000473064 RIMBP3CA6NJZ7 1639 aa9.65□□□□□ -0.86
CNOT10-213ENST00000473064 RIMBP3BA6NNM3 1639 aa9.65□□□□□ -0.86
CNOT10-213ENST00000473064 NESP48681 1621 aa9.65□□□□□ -0.86
CNOT10-213ENST00000473064 RIMBP3Q9UFD9 1639 aa9.65□□□□□ -0.86
CNOT10-213ENST00000473064 CIZ1Q9ULV3 898 aaPredicted RBP9.63□□□□□ -0.87
CNOT10-213ENST00000473064 RASEFQ8IZ41 740 aa9.62□□□□□ -0.87
CNOT10-213ENST00000473064 FARP1Q9Y4F1 1045 aaPredicted RBP9.62□□□□□ -0.87
CNOT10-213ENST00000473064 ZCCHC6Q5VYS8 1495 aaKnown RBP9.6□□□□□ -0.87
CNOT10-213ENST00000473064 ECM2O94769 699 aaPredicted RBP9.59□□□□□ -0.87
CNOT10-213ENST00000473064 NPM1P06748 294 aaKnown RBP eCLIP9.57□□□□□ -0.88
CNOT10-213ENST00000473064 DCAF8Q5TAQ9 597 aa9.56□□□□□ -0.88
CNOT10-213ENST00000473064 RGL2O15211 777 aa9.55□□□□□ -0.88
CNOT10-213ENST00000473064 GSE1Q14687 1217 aa9.54□□□□□ -0.88
CNOT10-213ENST00000473064 FAM212AQ96EL1 285 aa9.54□□□□□ -0.88
CNOT10-213ENST00000473064 ILDR1Q86SU0 546 aaPredicted RBP9.5□□□□□ -0.89
CNOT10-213ENST00000473064 LAMC3Q9Y6N6 1575 aa9.5□□□□□ -0.89
CNOT10-213ENST00000473064 RNF25Q96BH1 459 aaPredicted RBP9.49□□□□□ -0.89
CNOT10-213ENST00000473064 TSPYL2Q9H2G4 693 aaPredicted RBP9.49□□□□□ -0.89
CNOT10-213ENST00000473064 ARHGEF11O15085 1522 aa9.46□□□□□ -0.89
CNOT10-213ENST00000473064 PYGBP11216 843 aa9.45□□□□□ -0.9
CNOT10-213ENST00000473064 NCAPD3P42695 1498 aa9.45□□□□□ -0.9
CNOT10-213ENST00000473064 HMGXB3Q12766 1538 aa9.43□□□□□ -0.9
CNOT10-213ENST00000473064 CHRM1P11229 460 aaPredicted RBP9.43□□□□□ -0.9
CNOT10-213ENST00000473064 CCDC61Q9Y6R9 512 aa9.43□□□□□ -0.9
CNOT10-213ENST00000473064 WDR62O43379 1518 aa9.41□□□□□ -0.9
CNOT10-213ENST00000473064 MRC2Q9UBG0 1479 aa9.4□□□□□ -0.91
CNOT10-213ENST00000473064 RIOK3O14730 519 aaKnown RBP9.38□□□□□ -0.91
CNOT10-213ENST00000473064 CD44P16070 742 aaKnown RBP9.38□□□□□ -0.91
CNOT10-213ENST00000473064 PDS5BQ9NTI5 1447 aa9.38□□□□□ -0.91
CNOT10-213ENST00000473064 C19orf67A6NJJ6 358 aa9.36□□□□□ -0.91
CNOT10-213ENST00000473064 CYB5RLQ6IPT4 315 aa9.36□□□□□ -0.91
CNOT10-213ENST00000473064 ZRANB1Q9UGI0 708 aa9.36□□□□□ -0.91
CNOT10-213ENST00000473064 ATAD2BQ9ULI0 1458 aa9.35□□□□□ -0.91
CNOT10-213ENST00000473064 PAK3O75914 559 aaPredicted RBP9.35□□□□□ -0.91
CNOT10-213ENST00000473064 CHGAP10645 457 aaKnown RBP9.34□□□□□ -0.91
CNOT10-213ENST00000473064 PHF12Q96QT6 1004 aa9.33□□□□□ -0.92
CNOT10-213ENST00000473064 KIF12Q96FN5 646 aa9.32□□□□□ -0.92
CNOT10-213ENST00000473064 PCDHB8Q9UN66 801 aa9.32□□□□□ -0.92
CNOT10-213ENST00000473064 PCDHB13Q9Y5F0 798 aa9.32□□□□□ -0.92
CNOT10-213ENST00000473064 CHD1O14646 1710 aa9.31□□□□□ -0.92
CNOT10-213ENST00000473064 MAP3K13O43283 966 aa9.31□□□□□ -0.92
CNOT10-213ENST00000473064 BAZ1BQ9UIG0 1483 aaKnown RBP9.31□□□□□ -0.92
CNOT10-213ENST00000473064 ARAP1Q96P48 1450 aa9.3□□□□□ -0.92
CNOT10-213ENST00000473064 VGFO15240 615 aaPredicted RBP9.3□□□□□ -0.92
CNOT10-213ENST00000473064 HS6ST3Q8IZP7 471 aa9.3□□□□□ -0.92
CNOT10-213ENST00000473064 SMARCA4P51532 1647 aa9.3□□□□□ -0.92
CNOT10-213ENST00000473064 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.29□□□□□ -0.92
CNOT10-213ENST00000473064 EVX2Q03828 476 aa9.29□□□□□ -0.92
CNOT10-213ENST00000473064 ZFP91Q96JP5 570 aaPredicted RBP9.29□□□□□ -0.92
CNOT10-213ENST00000473064 IFNL1Q8IU54 200 aa9.28□□□□□ -0.92
CNOT10-213ENST00000473064 BBXQ8WY36 941 aaPredicted RBP9.28□□□□□ -0.92
CNOT10-213ENST00000473064 SLC24A1O60721 1099 aa9.27□□□□□ -0.93
CNOT10-213ENST00000473064 PLCB2Q00722 1185 aa9.27□□□□□ -0.93
CNOT10-213ENST00000473064 ZNF467Q7Z7K2 595 aaPredicted RBP9.27□□□□□ -0.93
CNOT10-213ENST00000473064 ZNF579Q8NAF0 562 aaKnown RBP9.27□□□□□ -0.93
CNOT10-213ENST00000473064 HAX1O00165 279 aa9.26□□□□□ -0.93
CNOT10-213ENST00000473064 STK25O00506 426 aa9.26□□□□□ -0.93
CNOT10-213ENST00000473064 SGIP1Q9BQI5 828 aa9.26□□□□□ -0.93
CNOT10-213ENST00000473064 CEP164Q9UPV0 1460 aa9.24□□□□□ -0.93
CNOT10-213ENST00000473064 BCL11BQ9C0K0 894 aaPredicted RBP9.24□□□□□ -0.93
CNOT10-213ENST00000473064 TAOK2Q9UL54 1235 aa9.24□□□□□ -0.93
CNOT10-213ENST00000473064 NKX1-1Q15270 411 aaPredicted RBP9.23□□□□□ -0.93
CNOT10-213ENST00000473064 POTEHQ6S545 545 aa9.23□□□□□ -0.93
CNOT10-213ENST00000473064 PDAP1Q13442 181 aaKnown RBP9.22□□□□□ -0.93
CNOT10-213ENST00000473064 STK24Q9Y6E0 443 aa9.22□□□□□ -0.93
CNOT10-213ENST00000473064 PSEN1P49768 467 aa9.21□□□□□ -0.94
CNOT10-213ENST00000473064 MS4A3Q96HJ5 214 aa9.21□□□□□ -0.94
CNOT10-213ENST00000473064 PAXIP1Q6ZW49 1069 aaPredicted RBP9.2□□□□□ -0.94
CNOT10-213ENST00000473064 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.2□□□□□ -0.94
CNOT10-213ENST00000473064 TRPC6Q9Y210 931 aa9.2□□□□□ -0.94
CNOT10-213ENST00000473064 CFAP44Q96MT7 982 aa9.17□□□□□ -0.94
CNOT10-213ENST00000473064 GALR2O43603 387 aaPredicted RBP9.16□□□□□ -0.94
CNOT10-213ENST00000473064 PEG3Q9GZU2 1588 aa9.15□□□□□ -0.95
CNOT10-213ENST00000473064 SPRYD3Q8NCJ5 442 aa9.14□□□□□ -0.95
CNOT10-213ENST00000473064 EIF4G3O43432 1585 aaKnown RBP9.14□□□□□ -0.95
CNOT10-213ENST00000473064 CADPSQ9ULU8 1353 aa9.12□□□□□ -0.95
CNOT10-213ENST00000473064 GTPBP6O43824 516 aaPredicted RBP9.12□□□□□ -0.95
CNOT10-213ENST00000473064 HAP1P54257 671 aaPredicted RBP9.12□□□□□ -0.95
CNOT10-213ENST00000473064 FANCD2Q9BXW9 1451 aa9.12□□□□□ -0.95
CNOT10-213ENST00000473064 RSF1Q96T23 1441 aaPredicted RBP9.12□□□□□ -0.95
CNOT10-213ENST00000473064 KIF13AQ9H1H9 1805 aa9.12□□□□□ -0.95
CNOT10-213ENST00000473064 TMEM106CQ9BVX2 250 aa9.11□□□□□ -0.95
CNOT10-213ENST00000473064 ERCC6L2Q5T890 1561 aa9.11□□□□□ -0.95
CNOT10-213ENST00000473064 PRDM2Q13029 1718 aa9.11□□□□□ -0.95
CNOT10-213ENST00000473064 CABP2Q9NPB3 220 aa9.1□□□□□ -0.95
CNOT10-213ENST00000473064 URB2Q14146 1524 aaKnown RBP9.09□□□□□ -0.95
CNOT10-213ENST00000473064 ZNF608Q9ULD9 1512 aaPredicted RBP9.09□□□□□ -0.95
CNOT10-213ENST00000473064 EFCAB3Q8N7B9 438 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms