RNA–Protein interactions for RNA: ENST00000472947.5

NMD3-206, Transcript of NMD3 ribosome export adaptor, humanhuman

TSL 1 (best) BASIC

Gene NMD3, Length 2,378 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NMD3-206ENST00000472947 CUL7Q14999 1698 aa16.62■□□□□ 0.25
NMD3-206ENST00000472947 MRC2Q9UBG0 1479 aa16.62■□□□□ 0.25
NMD3-206ENST00000472947 ZNF608Q9ULD9 1512 aaPredicted RBP16.57■□□□□ 0.24
NMD3-206ENST00000472947 CTTNBP2Q8WZ74 1663 aa16.56■□□□□ 0.24
NMD3-206ENST00000472947 ITGAEP38570 1179 aa16.55■□□□□ 0.24
NMD3-206ENST00000472947 ERCC6Q03468 1493 aa16.54■□□□□ 0.24
NMD3-206ENST00000472947 PCF11O94913 1555 aaKnown RBP16.53■□□□□ 0.24
NMD3-206ENST00000472947 PBRM1Q86U86 1689 aa16.52■□□□□ 0.23
NMD3-206ENST00000472947 TIAM1Q13009 1591 aa16.5■□□□□ 0.23
NMD3-206ENST00000472947 WDR62O43379 1518 aa16.48■□□□□ 0.23
NMD3-206ENST00000472947 FHAD1B1AJZ9 1412 aa16.47■□□□□ 0.23
NMD3-206ENST00000472947 LRRC9Q6ZRR7 1453 aa16.45■□□□□ 0.22
NMD3-206ENST00000472947 EFCAB5A4FU69 1503 aa16.44■□□□□ 0.22
NMD3-206ENST00000472947 RRBP1Q9P2E9 1410 aaKnown RBP16.44■□□□□ 0.22
NMD3-206ENST00000472947 IFT140Q96RY7 1462 aa16.44■□□□□ 0.22
NMD3-206ENST00000472947 PHLDB1Q86UU1 1377 aa16.43■□□□□ 0.22
NMD3-206ENST00000472947 CCNB3Q8WWL7 1395 aa16.43■□□□□ 0.22
NMD3-206ENST00000472947 GRIN2BQ13224 1484 aa16.43■□□□□ 0.22
NMD3-206ENST00000472947 ADAMTS12P58397 1594 aa16.42■□□□□ 0.22
NMD3-206ENST00000472947 ARID3CA6NKF2 412 aa16.41■□□□□ 0.22
NMD3-206ENST00000472947 CASKIN1Q8WXD9 1431 aa16.4■□□□□ 0.22
NMD3-206ENST00000472947 THOC2Q8NI27 1593 aaKnown RBP16.4■□□□□ 0.22
NMD3-206ENST00000472947 FAM50AQ14320 339 aaKnown RBP16.4■□□□□ 0.22
NMD3-206ENST00000472947 SAMD9Q5K651 1589 aa16.39■□□□□ 0.21
NMD3-206ENST00000472947 CFAP43Q8NDM7 1665 aa16.39■□□□□ 0.21
NMD3-206ENST00000472947 SNAPC4Q5SXM2 1469 aa16.39■□□□□ 0.21
NMD3-206ENST00000472947 EIF4G3O43432 1585 aaKnown RBP16.38■□□□□ 0.21
NMD3-206ENST00000472947 FYCO1Q9BQS8 1478 aa16.38■□□□□ 0.21
NMD3-206ENST00000472947 FBLN2P98095 1184 aa16.38■□□□□ 0.21
NMD3-206ENST00000472947 MAP3K1Q13233 1512 aa16.38■□□□□ 0.21
NMD3-206ENST00000472947 FMN1Q68DA7 1419 aa16.37■□□□□ 0.21
NMD3-206ENST00000472947 LRRIQ1Q96JM4 1722 aa16.37■□□□□ 0.21
NMD3-206ENST00000472947 IQGAP2Q13576 1575 aa16.34■□□□□ 0.21
NMD3-206ENST00000472947 DHX57Q6P158 1386 aaKnown RBP16.31■□□□□ 0.2
NMD3-206ENST00000472947 CHMP7Q8WUX9 453 aaPredicted RBP16.3■□□□□ 0.2
NMD3-206ENST00000472947 MTUS2Q5JR59 1369 aa16.3■□□□□ 0.2
NMD3-206ENST00000472947 GRIN2AQ12879 1464 aa16.28■□□□□ 0.2
NMD3-206ENST00000472947 RAB3GAP2Q9H2M9 1393 aa16.25■□□□□ 0.19
NMD3-206ENST00000472947 MAGI3Q5TCQ9 1506 aa16.24■□□□□ 0.19
NMD3-206ENST00000472947 CDK13Q14004 1512 aaKnown RBP16.23■□□□□ 0.19
NMD3-206ENST00000472947 KIAA0586Q9BVV6 1533 aa16.23■□□□□ 0.19
NMD3-206ENST00000472947 DISP1Q96F81 1524 aa16.22■□□□□ 0.19
NMD3-206ENST00000472947 CEP170Q5SW79 1584 aa16.21■□□□□ 0.19
NMD3-206ENST00000472947 UGGT2Q9NYU1 1516 aa16.21■□□□□ 0.19
NMD3-206ENST00000472947 NCOA2Q15596 1464 aa16.2■□□□□ 0.18
NMD3-206ENST00000472947 MAGI1Q96QZ7 1491 aaPredicted RBP16.2■□□□□ 0.18
NMD3-206ENST00000472947 FGD6Q6ZV73 1430 aa16.19■□□□□ 0.18
NMD3-206ENST00000472947 SYNJ2O15056 1496 aa16.19■□□□□ 0.18
NMD3-206ENST00000472947 EPRSP07814 1512 aaKnown RBP16.18■□□□□ 0.18
NMD3-206ENST00000472947 KIAA0556O60303 1618 aa16.17■□□□□ 0.18
NMD3-206ENST00000472947 DIEXFQ68CQ4 756 aaKnown RBP16.17■□□□□ 0.18
NMD3-206ENST00000472947 SETD5Q9C0A6 1442 aa16.17■□□□□ 0.18
NMD3-206ENST00000472947 ZNF316A6NFI3 1004 aaPredicted RBP16.15■□□□□ 0.18
NMD3-206ENST00000472947 PTPRKQ15262 1439 aa16.15■□□□□ 0.18
NMD3-206ENST00000472947 HECW1Q76N89 1606 aa16.15■□□□□ 0.18
NMD3-206ENST00000472947 JPH4Q96JJ6 628 aa16.14■□□□□ 0.17
NMD3-206ENST00000472947 SUPT6HQ7KZ85 1726 aaKnown RBP16.13■□□□□ 0.17
NMD3-206ENST00000472947 EHBP1L1Q8N3D4 1523 aa16.13■□□□□ 0.17
NMD3-206ENST00000472947 MYOM3Q5VTT5 1437 aa16.12■□□□□ 0.17
NMD3-206ENST00000472947 CCDC18Q5T9S5 1454 aa16.12■□□□□ 0.17
NMD3-206ENST00000472947 CHIC2Q9UKJ5 165 aa16.11■□□□□ 0.17
NMD3-206ENST00000472947 PLB1Q6P1J6 1458 aa16.1■□□□□ 0.17
NMD3-206ENST00000472947 SIN3AQ96ST3 1273 aa16.1■□□□□ 0.17
NMD3-206ENST00000472947 NUP153P49790 1475 aaKnown RBP16.1■□□□□ 0.17
NMD3-206ENST00000472947 MAPKBP1O60336 1514 aa16.09■□□□□ 0.17
NMD3-206ENST00000472947 NUP160Q12769 1436 aa16.09■□□□□ 0.17
NMD3-206ENST00000472947 CLSPNQ9HAW4 1339 aa16.08■□□□□ 0.16
NMD3-206ENST00000472947 NEUROD1Q13562 356 aa16.08■□□□□ 0.16
NMD3-206ENST00000472947 AEBP2Q6ZN18 517 aaPredicted RBP16.08■□□□□ 0.16
NMD3-206ENST00000472947 PTPN23Q9H3S7 1636 aa16.07■□□□□ 0.16
NMD3-206ENST00000472947 ARHGEF11O15085 1522 aa16.06■□□□□ 0.16
NMD3-206ENST00000472947 RRP7BPQ9NSQ0 103 aa16.06■□□□□ 0.16
NMD3-206ENST00000472947 RAPGEF6Q8TEU7 1601 aa16.06■□□□□ 0.16
NMD3-206ENST00000472947 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.05■□□□□ 0.16
NMD3-206ENST00000472947 ZNF644Q9H582 1327 aaPredicted RBP16.04■□□□□ 0.16
NMD3-206ENST00000472947 PRG4Q92954 1404 aaPredicted RBP16.03■□□□□ 0.16
NMD3-206ENST00000472947 CARMIL2Q6F5E8 1435 aa16■□□□□ 0.15
NMD3-206ENST00000472947 CHD1O14646 1710 aa16■□□□□ 0.15
NMD3-206ENST00000472947 NAIPQ13075 1403 aa15.99■□□□□ 0.15
NMD3-206ENST00000472947 HFM1A2PYH4 1435 aa15.97■□□□□ 0.15
NMD3-206ENST00000472947 ZNF777Q9ULD5 760 aaPredicted RBP15.95■□□□□ 0.14
NMD3-206ENST00000472947 CDK11AQ9UQ88 783 aaPredicted RBP15.95■□□□□ 0.14
NMD3-206ENST00000472947 TCOF1Q13428 1488 aaKnown RBP15.94■□□□□ 0.14
NMD3-206ENST00000472947 MIER1Q8N108 512 aa15.94■□□□□ 0.14
NMD3-206ENST00000472947 KDM6BO15054 1643 aa15.94■□□□□ 0.14
NMD3-206ENST00000472947 KIF14Q15058 1648 aa15.94■□□□□ 0.14
NMD3-206ENST00000472947 TROQ12816 1431 aaPredicted RBP15.91■□□□□ 0.14
NMD3-206ENST00000472947 TRIM52Q96A61 297 aa15.91■□□□□ 0.14
NMD3-206ENST00000472947 MIA2Q96PC5 1412 aa15.91■□□□□ 0.14
NMD3-206ENST00000472947 ERCC6L2Q5T890 1561 aa15.91■□□□□ 0.14
NMD3-206ENST00000472947 ATP10BO94823 1461 aa15.9■□□□□ 0.14
NMD3-206ENST00000472947 CFDP1Q9UEE9 299 aaPredicted RBP15.9■□□□□ 0.14
NMD3-206ENST00000472947 PTPRGP23470 1445 aa15.89■□□□□ 0.13
NMD3-206ENST00000472947 ABCA8O94911 1581 aa15.89■□□□□ 0.13
NMD3-206ENST00000472947 FOXD1Q16676 465 aa15.88■□□□□ 0.13
NMD3-206ENST00000472947 UACAQ9BZF9 1416 aa15.88■□□□□ 0.13
NMD3-206ENST00000472947 PLEKHD1A6NEE1 506 aa15.87■□□□□ 0.13
NMD3-206ENST00000472947 HIRIP3Q9BW71 556 aaPredicted RBP15.87■□□□□ 0.13
NMD3-206ENST00000472947 ABCC5O15440 1437 aa15.87■□□□□ 0.13
NMD3-206ENST00000472947 DAPK1P53355 1430 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms