RNA–Protein interactions for RNA: ENST00000472776.1

CLASP1-210, Transcript of cytoplasmic linker associated protein 1, humanhuman

TSL 2

Gene CLASP1, Length 1,982 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLASP1-210ENST00000472776 CEP162Q5TB80 1403 aa25.03■■□□□ 1.6
CLASP1-210ENST00000472776 CEP170Q5SW79 1584 aa24.99■■□□□ 1.59
CLASP1-210ENST00000472776 RANGAP1P46060 587 aaPredicted RBP24.99■■□□□ 1.59
CLASP1-210ENST00000472776 NUP160Q12769 1436 aa24.95■■□□□ 1.58
CLASP1-210ENST00000472776 CLIP1P30622 1438 aa24.92■■□□□ 1.58
CLASP1-210ENST00000472776 IQGAP2Q13576 1575 aa24.89■■□□□ 1.58
CLASP1-210ENST00000472776 KIAA0586Q9BVV6 1533 aa24.88■■□□□ 1.57
CLASP1-210ENST00000472776 ARHGAP35Q9NRY4 1499 aa24.84■■□□□ 1.57
CLASP1-210ENST00000472776 ARAP1Q96P48 1450 aa24.78■■□□□ 1.56
CLASP1-210ENST00000472776 SAMD9Q5K651 1589 aa24.77■■□□□ 1.56
CLASP1-210ENST00000472776 UGGT2Q9NYU1 1516 aa24.76■■□□□ 1.55
CLASP1-210ENST00000472776 EFCAB5A4FU69 1503 aa24.74■■□□□ 1.55
CLASP1-210ENST00000472776 CLASP1Q7Z460 1538 aa24.74■■□□□ 1.55
CLASP1-210ENST00000472776 P3H3Q8IVL6 736 aa24.74■■□□□ 1.55
CLASP1-210ENST00000472776 JPH4Q96JJ6 628 aa24.71■■□□□ 1.55
CLASP1-210ENST00000472776 FHOD3Q2V2M9 1422 aa24.7■■□□□ 1.55
CLASP1-210ENST00000472776 DISP1Q96F81 1524 aa24.7■■□□□ 1.54
CLASP1-210ENST00000472776 SHROOM2Q13796 1616 aa24.67■■□□□ 1.54
CLASP1-210ENST00000472776 KIAA0556O60303 1618 aa24.66■■□□□ 1.54
CLASP1-210ENST00000472776 VPS8Q8N3P4 1428 aa24.64■■□□□ 1.54
CLASP1-210ENST00000472776 OSCARQ8IYS5 282 aa24.63■■□□□ 1.53
CLASP1-210ENST00000472776 PRG4Q92954 1404 aaPredicted RBP24.6■■□□□ 1.53
CLASP1-210ENST00000472776 ERCC6L2Q5T890 1561 aa24.58■■□□□ 1.53
CLASP1-210ENST00000472776 CARMIL2Q6F5E8 1435 aa24.54■■□□□ 1.52
CLASP1-210ENST00000472776 PCF11O94913 1555 aaKnown RBP24.51■■□□□ 1.51
CLASP1-210ENST00000472776 TTBK1Q5TCY1 1321 aaPredicted RBP24.5■■□□□ 1.51
CLASP1-210ENST00000472776 FMN1Q68DA7 1419 aa24.5■■□□□ 1.51
CLASP1-210ENST00000472776 CASKIN1Q8WXD9 1431 aa24.43■■□□□ 1.5
CLASP1-210ENST00000472776 FYCO1Q9BQS8 1478 aa24.41■■□□□ 1.5
CLASP1-210ENST00000472776 PLB1Q6P1J6 1458 aa24.39■■□□□ 1.5
CLASP1-210ENST00000472776 LRRIQ1Q96JM4 1722 aa24.39■■□□□ 1.49
CLASP1-210ENST00000472776 PPARGC1BQ86YN6 1023 aaKnown RBP24.38■■□□□ 1.49
CLASP1-210ENST00000472776 PTPRGP23470 1445 aa24.38■■□□□ 1.49
CLASP1-210ENST00000472776 ATP1B4Q9UN42 357 aaPredicted RBP24.37■■□□□ 1.49
CLASP1-210ENST00000472776 RAPGEF6Q8TEU7 1601 aa24.35■■□□□ 1.49
CLASP1-210ENST00000472776 ABCA8O94911 1581 aa24.33■■□□□ 1.49
CLASP1-210ENST00000472776 HECW1Q76N89 1606 aa24.32■■□□□ 1.48
CLASP1-210ENST00000472776 NUP153P49790 1475 aaKnown RBP24.31■■□□□ 1.48
CLASP1-210ENST00000472776 TIAM1Q13009 1591 aa24.3■■□□□ 1.48
CLASP1-210ENST00000472776 ARHGEF11O15085 1522 aa24.29■■□□□ 1.48
CLASP1-210ENST00000472776 CFAP43Q8NDM7 1665 aa24.29■■□□□ 1.48
CLASP1-210ENST00000472776 ARID3CA6NKF2 412 aa24.28■■□□□ 1.48
CLASP1-210ENST00000472776 APLP2Q06481 763 aa24.28■■□□□ 1.48
CLASP1-210ENST00000472776 KANK4Q5T7N3 995 aaPredicted RBP24.27■■□□□ 1.48
CLASP1-210ENST00000472776 EPRSP07814 1512 aaKnown RBP24.26■■□□□ 1.47
CLASP1-210ENST00000472776 CDK13Q14004 1512 aaKnown RBP24.26■■□□□ 1.47
CLASP1-210ENST00000472776 MAP3K1Q13233 1512 aa24.25■■□□□ 1.47
CLASP1-210ENST00000472776 UACAQ9BZF9 1416 aa24.24■■□□□ 1.47
CLASP1-210ENST00000472776 RIMBP3CA6NJZ7 1639 aa24.22■■□□□ 1.47
CLASP1-210ENST00000472776 RIMBP3BA6NNM3 1639 aa24.22■■□□□ 1.47
CLASP1-210ENST00000472776 RIMBP3Q9UFD9 1639 aa24.22■■□□□ 1.47
CLASP1-210ENST00000472776 CCDC18Q5T9S5 1454 aa24.21■■□□□ 1.47
CLASP1-210ENST00000472776 ABCC2Q92887 1545 aa24.2■■□□□ 1.46
CLASP1-210ENST00000472776 LRRC9Q6ZRR7 1453 aa24.18■■□□□ 1.46
CLASP1-210ENST00000472776 MAGI3Q5TCQ9 1506 aa24.17■■□□□ 1.46
CLASP1-210ENST00000472776 ADCY10Q96PN6 1610 aa24.16■■□□□ 1.46
CLASP1-210ENST00000472776 ATP10BO94823 1461 aa24.15■■□□□ 1.46
CLASP1-210ENST00000472776 UHRF1BP1LA0JNW5 1464 aa24.14■■□□□ 1.46
CLASP1-210ENST00000472776 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.1■■□□□ 1.45
CLASP1-210ENST00000472776 HNRNPUL2Q1KMD3 747 aaKnown RBP24.1■■□□□ 1.45
CLASP1-210ENST00000472776 MTUS2Q5JR59 1369 aa24.08■■□□□ 1.44
CLASP1-210ENST00000472776 ZCCHC11Q5TAX3 1644 aaKnown RBP24.06■■□□□ 1.44
CLASP1-210ENST00000472776 KDM5BQ9UGL1 1544 aa24.06■■□□□ 1.44
CLASP1-210ENST00000472776 EHBP1L1Q8N3D4 1523 aa24.06■■□□□ 1.44
CLASP1-210ENST00000472776 CYB5RLQ6IPT4 315 aa24.05■■□□□ 1.44
CLASP1-210ENST00000472776 TROQ12816 1431 aaPredicted RBP23.99■■□□□ 1.43
CLASP1-210ENST00000472776 CDK11AQ9UQ88 783 aaPredicted RBP23.98■■□□□ 1.43
CLASP1-210ENST00000472776 SUPT6HQ7KZ85 1726 aaKnown RBP23.98■■□□□ 1.43
CLASP1-210ENST00000472776 PHLDB1Q86UU1 1377 aa23.97■■□□□ 1.43
CLASP1-210ENST00000472776 NCOA2Q15596 1464 aa23.97■■□□□ 1.43
CLASP1-210ENST00000472776 KIF14Q15058 1648 aa23.96■■□□□ 1.43
CLASP1-210ENST00000472776 PLEKHD1A6NEE1 506 aa23.95■■□□□ 1.42
CLASP1-210ENST00000472776 PELP1Q8IZL8 1130 aaKnown RBP23.94■■□□□ 1.42
CLASP1-210ENST00000472776 TRIM26Q12899 539 aaPredicted RBP23.92■■□□□ 1.42
CLASP1-210ENST00000472776 ASXL2Q76L83 1435 aa23.86■■□□□ 1.41
CLASP1-210ENST00000472776 PCGF6Q9BYE7 350 aa23.85■■□□□ 1.41
CLASP1-210ENST00000472776 WDR7Q9Y4E6 1490 aa23.84■■□□□ 1.41
CLASP1-210ENST00000472776 NPM1P06748 294 aaKnown RBP eCLIP23.84■■□□□ 1.41
CLASP1-210ENST00000472776 ABCC10Q5T3U5 1492 aa23.84■■□□□ 1.41
CLASP1-210ENST00000472776 RRBP1Q9P2E9 1410 aaKnown RBP23.84■■□□□ 1.41
CLASP1-210ENST00000472776 DNAJC5Q9H3Z4 198 aa23.83■■□□□ 1.41
CLASP1-210ENST00000472776 MYOM3Q5VTT5 1437 aa23.83■■□□□ 1.4
CLASP1-210ENST00000472776 KCNH8Q96L42 1107 aa23.82■■□□□ 1.4
CLASP1-210ENST00000472776 TTC37Q6PGP7 1564 aa23.8■■□□□ 1.4
CLASP1-210ENST00000472776 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.8■■□□□ 1.4
CLASP1-210ENST00000472776 FGD6Q6ZV73 1430 aa23.79■■□□□ 1.4
CLASP1-210ENST00000472776 CCNB3Q8WWL7 1395 aa23.78■■□□□ 1.4
CLASP1-210ENST00000472776 CDC42BPAQ5VT25 1732 aa23.78■■□□□ 1.4
CLASP1-210ENST00000472776 GPATCH8Q9UKJ3 1502 aaKnown RBP23.78■■□□□ 1.4
CLASP1-210ENST00000472776 MAPKBP1O60336 1514 aa23.76■■□□□ 1.39
CLASP1-210ENST00000472776 ITSN2Q9NZM3 1697 aa23.73■■□□□ 1.39
CLASP1-210ENST00000472776 PTPN23Q9H3S7 1636 aa23.72■■□□□ 1.39
CLASP1-210ENST00000472776 CDC42BPBQ9Y5S2 1711 aa23.7■■□□□ 1.38
CLASP1-210ENST00000472776 PREX2Q70Z35 1606 aa23.7■■□□□ 1.38
CLASP1-210ENST00000472776 MIA2Q96PC5 1412 aa23.69■■□□□ 1.38
CLASP1-210ENST00000472776 FAM50AQ14320 339 aaKnown RBP23.69■■□□□ 1.38
CLASP1-210ENST00000472776 ABCA9Q8IUA7 1624 aa23.69■■□□□ 1.38
CLASP1-210ENST00000472776 MYO5CQ9NQX4 1742 aa23.68■■□□□ 1.38
CLASP1-210ENST00000472776 ZNF644Q9H582 1327 aaPredicted RBP23.67■■□□□ 1.38
CLASP1-210ENST00000472776 TCOF1Q13428 1488 aaKnown RBP23.67■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms