RNA–Protein interactions for RNA: ENST00000472608.5

ABCF3-209, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 657 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-209ENST00000472608 TOP2BQ02880 1626 aa25.18■■□□□ 1.62
ABCF3-209ENST00000472608 MAPKBP1O60336 1514 aa25.17■■□□□ 1.62
ABCF3-209ENST00000472608 BIVM-ERCC5R4GMW8 1640 aa25.17■■□□□ 1.62
ABCF3-209ENST00000472608 KDM4FA0A1W2PPD8 638 aa25.16■■□□□ 1.62
ABCF3-209ENST00000472608 NPM1P06748 294 aaKnown RBP eCLIP25.12■■□□□ 1.61
ABCF3-209ENST00000472608 DIP2BQ9P265 1576 aa25.12■■□□□ 1.61
ABCF3-209ENST00000472608 RUSC2Q8N2Y8 1516 aa25.06■■□□□ 1.6
ABCF3-209ENST00000472608 ADCY10Q96PN6 1610 aa25.04■■□□□ 1.6
ABCF3-209ENST00000472608 KDM6BO15054 1643 aa25.03■■□□□ 1.6
ABCF3-209ENST00000472608 ILDR1Q86SU0 546 aaPredicted RBP25■■□□□ 1.59
ABCF3-209ENST00000472608 KIAA0586Q9BVV6 1533 aa24.92■■□□□ 1.58
ABCF3-209ENST00000472608 TSPOAP1O95153 1857 aa24.85■■□□□ 1.57
ABCF3-209ENST00000472608 IGF1RP08069 1367 aa24.81■■□□□ 1.56
ABCF3-209ENST00000472608 PTPRGP23470 1445 aa24.79■■□□□ 1.56
ABCF3-209ENST00000472608 GLI2P10070 1586 aa24.76■■□□□ 1.55
ABCF3-209ENST00000472608 ABCC2Q92887 1545 aa24.76■■□□□ 1.55
ABCF3-209ENST00000472608 ADGRL1O94910 1474 aa24.74■■□□□ 1.55
ABCF3-209ENST00000472608 PLB1Q6P1J6 1458 aa24.74■■□□□ 1.55
ABCF3-209ENST00000472608 PPRC1Q5VV67 1664 aaKnown RBP24.73■■□□□ 1.55
ABCF3-209ENST00000472608 ASXL2Q76L83 1435 aa24.72■■□□□ 1.55
ABCF3-209ENST00000472608 TNIKQ9UKE5 1360 aa24.71■■□□□ 1.55
ABCF3-209ENST00000472608 CUL7Q14999 1698 aa24.7■■□□□ 1.54
ABCF3-209ENST00000472608 KIF27Q86VH2 1401 aa24.68■■□□□ 1.54
ABCF3-209ENST00000472608 UHRF1BP1LA0JNW5 1464 aa24.67■■□□□ 1.54
ABCF3-209ENST00000472608 COL17A1Q9UMD9 1497 aaPredicted RBP24.67■■□□□ 1.54
ABCF3-209ENST00000472608 CARMIL2Q6F5E8 1435 aa24.66■■□□□ 1.54
ABCF3-209ENST00000472608 UACAQ9BZF9 1416 aa24.59■■□□□ 1.53
ABCF3-209ENST00000472608 HECW2Q9P2P5 1572 aa24.59■■□□□ 1.53
ABCF3-209ENST00000472608 CARMIL1Q5VZK9 1371 aa24.58■■□□□ 1.53
ABCF3-209ENST00000472608 EPRSP07814 1512 aaKnown RBP24.58■■□□□ 1.53
ABCF3-209ENST00000472608 TTBK1Q5TCY1 1321 aaPredicted RBP24.58■■□□□ 1.52
ABCF3-209ENST00000472608 KDM5BQ9UGL1 1544 aa24.56■■□□□ 1.52
ABCF3-209ENST00000472608 MAP3K4Q9Y6R4 1608 aa24.55■■□□□ 1.52
ABCF3-209ENST00000472608 TEX14Q8IWB6 1497 aa24.54■■□□□ 1.52
ABCF3-209ENST00000472608 DISP1Q96F81 1524 aa24.51■■□□□ 1.51
ABCF3-209ENST00000472608 IQGAP2Q13576 1575 aa24.51■■□□□ 1.51
ABCF3-209ENST00000472608 UGGT2Q9NYU1 1516 aa24.41■■□□□ 1.5
ABCF3-209ENST00000472608 ZCCHC11Q5TAX3 1644 aaKnown RBP24.41■■□□□ 1.5
ABCF3-209ENST00000472608 WDR7Q9Y4E6 1490 aa24.37■■□□□ 1.49
ABCF3-209ENST00000472608 MAGI3Q5TCQ9 1506 aa24.35■■□□□ 1.49
ABCF3-209ENST00000472608 FBXO41Q8TF61 875 aa24.33■■□□□ 1.49
ABCF3-209ENST00000472608 KIAA0556O60303 1618 aa24.32■■□□□ 1.48
ABCF3-209ENST00000472608 CD109Q6YHK3 1445 aa24.29■■□□□ 1.48
ABCF3-209ENST00000472608 RAPGEF2Q9Y4G8 1499 aa24.27■■□□□ 1.48
ABCF3-209ENST00000472608 CFAP43Q8NDM7 1665 aa24.25■■□□□ 1.47
ABCF3-209ENST00000472608 ARAP3Q8WWN8 1544 aa24.18■■□□□ 1.46
ABCF3-209ENST00000472608 ABCA8O94911 1581 aa24.17■■□□□ 1.46
ABCF3-209ENST00000472608 KCNH8Q96L42 1107 aa24.17■■□□□ 1.46
ABCF3-209ENST00000472608 KIF21BO75037 1637 aa24.16■■□□□ 1.46
ABCF3-209ENST00000472608 GOLGA3Q08378 1498 aa24.12■■□□□ 1.45
ABCF3-209ENST00000472608 PTPRMP28827 1452 aa24.11■■□□□ 1.45
ABCF3-209ENST00000472608 ADAMTSL3P82987 1691 aa24.09■■□□□ 1.45
ABCF3-209ENST00000472608 PHLDB1Q86UU1 1377 aa24.09■■□□□ 1.45
ABCF3-209ENST00000472608 CTTNBP2Q8WZ74 1663 aa24.02■■□□□ 1.44
ABCF3-209ENST00000472608 ATP10BO94823 1461 aa23.99■■□□□ 1.43
ABCF3-209ENST00000472608 PCF11O94913 1555 aaKnown RBP23.97■■□□□ 1.43
ABCF3-209ENST00000472608 ABCA9Q8IUA7 1624 aa23.97■■□□□ 1.43
ABCF3-209ENST00000472608 LMTK3Q96Q04 1460 aa23.96■■□□□ 1.43
ABCF3-209ENST00000472608 RAPGEF3O95398 923 aa23.96■■□□□ 1.43
ABCF3-209ENST00000472608 CHIC1Q5VXU3 224 aa23.96■■□□□ 1.43
ABCF3-209ENST00000472608 NEO1Q92859 1461 aa23.94■■□□□ 1.42
ABCF3-209ENST00000472608 BCORL1Q5H9F3 1711 aa23.94■■□□□ 1.42
ABCF3-209ENST00000472608 PRXQ9BXM0 1461 aa23.91■■□□□ 1.42
ABCF3-209ENST00000472608 MADDQ8WXG6 1647 aa23.89■■□□□ 1.42
ABCF3-209ENST00000472608 FRMPD1Q5SYB0 1578 aa23.88■■□□□ 1.41
ABCF3-209ENST00000472608 FAM9AQ8IZU1 332 aaPredicted RBP23.87■■□□□ 1.41
ABCF3-209ENST00000472608 ARID3CA6NKF2 412 aa23.85■■□□□ 1.41
ABCF3-209ENST00000472608 ARID4BQ4LE39 1312 aaPredicted RBP23.84■■□□□ 1.41
ABCF3-209ENST00000472608 EEA1Q15075 1411 aa23.8■■□□□ 1.4
ABCF3-209ENST00000472608 P3H3Q8IVL6 736 aa23.78■■□□□ 1.4
ABCF3-209ENST00000472608 ARHGEF40Q8TER5 1519 aa23.78■■□□□ 1.4
ABCF3-209ENST00000472608 CERKQ8TCT0 537 aa23.77■■□□□ 1.4
ABCF3-209ENST00000472608 FHOD3Q2V2M9 1422 aa23.76■■□□□ 1.39
ABCF3-209ENST00000472608 HSPA2P54652 639 aa23.76■■□□□ 1.39
ABCF3-209ENST00000472608 RIMS1Q86UR5 1692 aaKnown RBP23.76■■□□□ 1.39
ABCF3-209ENST00000472608 DENND4BO75064 1496 aaPredicted RBP23.75■■□□□ 1.39
ABCF3-209ENST00000472608 RAPGEF6Q8TEU7 1601 aa23.73■■□□□ 1.39
ABCF3-209ENST00000472608 CSRNP3Q8WYN3 585 aa23.73■■□□□ 1.39
ABCF3-209ENST00000472608 SAMD9Q5K651 1589 aa23.73■■□□□ 1.39
ABCF3-209ENST00000472608 RICTORQ6R327 1708 aa23.72■■□□□ 1.39
ABCF3-209ENST00000472608 POGZQ7Z3K3 1410 aa23.7■■□□□ 1.38
ABCF3-209ENST00000472608 AKNAQ7Z591 1439 aa23.7■■□□□ 1.38
ABCF3-209ENST00000472608 NUP153P49790 1475 aaKnown RBP23.69■■□□□ 1.38
ABCF3-209ENST00000472608 FANCAO15360 1455 aa23.68■■□□□ 1.38
ABCF3-209ENST00000472608 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.67■■□□□ 1.38
ABCF3-209ENST00000472608 HNRNPUL2Q1KMD3 747 aaKnown RBP23.67■■□□□ 1.38
ABCF3-209ENST00000472608 ZMYM4Q5VZL5 1548 aa23.67■■□□□ 1.38
ABCF3-209ENST00000472608 MAGI2Q86UL8 1455 aa23.64■■□□□ 1.38
ABCF3-209ENST00000472608 PLEKHD1A6NEE1 506 aa23.63■■□□□ 1.37
ABCF3-209ENST00000472608 YEATS2Q9ULM3 1422 aa23.62■■□□□ 1.37
ABCF3-209ENST00000472608 SIGLEC1Q9BZZ2 1709 aa23.62■■□□□ 1.37
ABCF3-209ENST00000472608 CFAP74Q9C0B2 1584 aa23.61■■□□□ 1.37
ABCF3-209ENST00000472608 EFCAB5A4FU69 1503 aa23.61■■□□□ 1.37
ABCF3-209ENST00000472608 ZFYVE16Q7Z3T8 1539 aa23.6■■□□□ 1.37
ABCF3-209ENST00000472608 SOCS7O14512 581 aa23.59■■□□□ 1.37
ABCF3-209ENST00000472608 ILDR2Q71H61 639 aa23.59■■□□□ 1.37
ABCF3-209ENST00000472608 TTC37Q6PGP7 1564 aa23.59■■□□□ 1.37
ABCF3-209ENST00000472608 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.59■■□□□ 1.37
ABCF3-209ENST00000472608 PLPPR3Q6T4P5 718 aa23.57■■□□□ 1.36
ABCF3-209ENST00000472608 DISP3Q9P2K9 1392 aa23.54■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms