RNA–Protein interactions for RNA: ENST00000471739.1

FYCO1-204, Transcript of FYVE and coiled-coil domain containing 1, humanhuman

TSL 4

Gene FYCO1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FYCO1-204ENST00000471739 IGF1RP08069 1367 aa21.36■■□□□ 1.01
FYCO1-204ENST00000471739 CUL7Q14999 1698 aa21.3■■□□□ 1
FYCO1-204ENST00000471739 KIAA0586Q9BVV6 1533 aa21.29■■□□□ 1
FYCO1-204ENST00000471739 CARMIL1Q5VZK9 1371 aa21.22■□□□□ 0.99
FYCO1-204ENST00000471739 NPM1P06748 294 aaKnown RBP eCLIP21.17■□□□□ 0.98
FYCO1-204ENST00000471739 ADCY10Q96PN6 1610 aa21.13■□□□□ 0.97
FYCO1-204ENST00000471739 MAPKBP1O60336 1514 aa21.13■□□□□ 0.97
FYCO1-204ENST00000471739 KIF13AQ9H1H9 1805 aa21.12■□□□□ 0.97
FYCO1-204ENST00000471739 ABCC10Q5T3U5 1492 aa21.1■□□□□ 0.97
FYCO1-204ENST00000471739 PTPRGP23470 1445 aa21.08■□□□□ 0.97
FYCO1-204ENST00000471739 FAM69CQ0P6D2 419 aa21.08■□□□□ 0.97
FYCO1-204ENST00000471739 CARMIL2Q6F5E8 1435 aa21.08■□□□□ 0.97
FYCO1-204ENST00000471739 IQGAP2Q13576 1575 aa21.06■□□□□ 0.96
FYCO1-204ENST00000471739 TNIKQ9UKE5 1360 aa21.05■□□□□ 0.96
FYCO1-204ENST00000471739 AEBP2Q6ZN18 517 aaPredicted RBP21.03■□□□□ 0.96
FYCO1-204ENST00000471739 DIP2BQ9P265 1576 aa21.02■□□□□ 0.96
FYCO1-204ENST00000471739 RAPGEF2Q9Y4G8 1499 aa21.02■□□□□ 0.96
FYCO1-204ENST00000471739 TTBK1Q5TCY1 1321 aaPredicted RBP21.01■□□□□ 0.95
FYCO1-204ENST00000471739 ABCC2Q92887 1545 aa20.97■□□□□ 0.95
FYCO1-204ENST00000471739 DISP1Q96F81 1524 aa20.96■□□□□ 0.95
FYCO1-204ENST00000471739 UGGT2Q9NYU1 1516 aa20.94■□□□□ 0.94
FYCO1-204ENST00000471739 UHRF1BP1LA0JNW5 1464 aa20.94■□□□□ 0.94
FYCO1-204ENST00000471739 UACAQ9BZF9 1416 aa20.92■□□□□ 0.94
FYCO1-204ENST00000471739 PLB1Q6P1J6 1458 aa20.88■□□□□ 0.93
FYCO1-204ENST00000471739 ASXL2Q76L83 1435 aa20.88■□□□□ 0.93
FYCO1-204ENST00000471739 KIAA0556O60303 1618 aa20.86■□□□□ 0.93
FYCO1-204ENST00000471739 KDM6BO15054 1643 aa20.83■□□□□ 0.93
FYCO1-204ENST00000471739 KDM5BQ9UGL1 1544 aa20.83■□□□□ 0.92
FYCO1-204ENST00000471739 PRXQ9BXM0 1461 aa20.82■□□□□ 0.92
FYCO1-204ENST00000471739 TSPOAP1O95153 1857 aa20.82■□□□□ 0.92
FYCO1-204ENST00000471739 GLI2P10070 1586 aa20.81■□□□□ 0.92
FYCO1-204ENST00000471739 CTTNBP2Q8WZ74 1663 aa20.8■□□□□ 0.92
FYCO1-204ENST00000471739 GOLGA3Q08378 1498 aa20.79■□□□□ 0.92
FYCO1-204ENST00000471739 EPRSP07814 1512 aaKnown RBP20.75■□□□□ 0.91
FYCO1-204ENST00000471739 ZCCHC11Q5TAX3 1644 aaKnown RBP20.75■□□□□ 0.91
FYCO1-204ENST00000471739 PPRC1Q5VV67 1664 aaKnown RBP20.72■□□□□ 0.91
FYCO1-204ENST00000471739 WDR7Q9Y4E6 1490 aa20.69■□□□□ 0.9
FYCO1-204ENST00000471739 MAP3K4Q9Y6R4 1608 aa20.68■□□□□ 0.9
FYCO1-204ENST00000471739 ABCA8O94911 1581 aa20.68■□□□□ 0.9
FYCO1-204ENST00000471739 CSRNP3Q8WYN3 585 aa20.66■□□□□ 0.9
FYCO1-204ENST00000471739 TEX14Q8IWB6 1497 aa20.66■□□□□ 0.9
FYCO1-204ENST00000471739 KDM4FA0A1W2PPD8 638 aa20.62■□□□□ 0.89
FYCO1-204ENST00000471739 FAM9AQ8IZU1 332 aaPredicted RBP20.62■□□□□ 0.89
FYCO1-204ENST00000471739 COL17A1Q9UMD9 1497 aaPredicted RBP20.61■□□□□ 0.89
FYCO1-204ENST00000471739 EEA1Q15075 1411 aa20.6■□□□□ 0.89
FYCO1-204ENST00000471739 P3H3Q8IVL6 736 aa20.57■□□□□ 0.88
FYCO1-204ENST00000471739 KCNH8Q96L42 1107 aa20.57■□□□□ 0.88
FYCO1-204ENST00000471739 CD109Q6YHK3 1445 aa20.56■□□□□ 0.88
FYCO1-204ENST00000471739 MAGI3Q5TCQ9 1506 aa20.54■□□□□ 0.88
FYCO1-204ENST00000471739 SAMD9Q5K651 1589 aa20.54■□□□□ 0.88
FYCO1-204ENST00000471739 CFAP43Q8NDM7 1665 aa20.53■□□□□ 0.88
FYCO1-204ENST00000471739 ATP10BO94823 1461 aa20.51■□□□□ 0.87
FYCO1-204ENST00000471739 ARID3CA6NKF2 412 aa20.5■□□□□ 0.87
FYCO1-204ENST00000471739 ADGRL1O94910 1474 aa20.48■□□□□ 0.87
FYCO1-204ENST00000471739 RAPGEF6Q8TEU7 1601 aa20.45■□□□□ 0.86
FYCO1-204ENST00000471739 RANGAP1P46060 587 aaPredicted RBP20.43■□□□□ 0.86
FYCO1-204ENST00000471739 FHOD3Q2V2M9 1422 aa20.41■□□□□ 0.86
FYCO1-204ENST00000471739 KIF21BO75037 1637 aa20.4■□□□□ 0.86
FYCO1-204ENST00000471739 NUP153P49790 1475 aaKnown RBP20.4■□□□□ 0.86
FYCO1-204ENST00000471739 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.39■□□□□ 0.85
FYCO1-204ENST00000471739 HNRNPUL2Q1KMD3 747 aaKnown RBP20.39■□□□□ 0.85
FYCO1-204ENST00000471739 ABCA9Q8IUA7 1624 aa20.38■□□□□ 0.85
FYCO1-204ENST00000471739 ARAP3Q8WWN8 1544 aa20.38■□□□□ 0.85
FYCO1-204ENST00000471739 PHLDB1Q86UU1 1377 aa20.36■□□□□ 0.85
FYCO1-204ENST00000471739 EFCAB5A4FU69 1503 aa20.36■□□□□ 0.85
FYCO1-204ENST00000471739 NEO1Q92859 1461 aa20.31■□□□□ 0.84
FYCO1-204ENST00000471739 PLEKHD1A6NEE1 506 aa20.3■□□□□ 0.84
FYCO1-204ENST00000471739 CHIC1Q5VXU3 224 aa20.29■□□□□ 0.84
FYCO1-204ENST00000471739 UBTFP17480 764 aaKnown RBP20.27■□□□□ 0.84
FYCO1-204ENST00000471739 RAPGEF3O95398 923 aa20.25■□□□□ 0.83
FYCO1-204ENST00000471739 EHMT2Q96KQ7 1210 aa20.23■□□□□ 0.83
FYCO1-204ENST00000471739 FMN1Q68DA7 1419 aa20.19■□□□□ 0.82
FYCO1-204ENST00000471739 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.19■□□□□ 0.82
FYCO1-204ENST00000471739 CDK13Q14004 1512 aaKnown RBP20.18■□□□□ 0.82
FYCO1-204ENST00000471739 FRMPD1Q5SYB0 1578 aa20.18■□□□□ 0.82
FYCO1-204ENST00000471739 FANCAO15360 1455 aa20.18■□□□□ 0.82
FYCO1-204ENST00000471739 ARHGAP35Q9NRY4 1499 aa20.18■□□□□ 0.82
FYCO1-204ENST00000471739 AKNAQ7Z591 1439 aa20.17■□□□□ 0.82
FYCO1-204ENST00000471739 DENND4BO75064 1496 aaPredicted RBP20.17■□□□□ 0.82
FYCO1-204ENST00000471739 HECW2Q9P2P5 1572 aa20.17■□□□□ 0.82
FYCO1-204ENST00000471739 TTC37Q6PGP7 1564 aa20.16■□□□□ 0.82
FYCO1-204ENST00000471739 CFAP74Q9C0B2 1584 aa20.15■□□□□ 0.82
FYCO1-204ENST00000471739 HECW1Q76N89 1606 aa20.13■□□□□ 0.81
FYCO1-204ENST00000471739 ATP1B4Q9UN42 357 aaPredicted RBP20.13■□□□□ 0.81
FYCO1-204ENST00000471739 CDK11AQ9UQ88 783 aaPredicted RBP20.11■□□□□ 0.81
FYCO1-204ENST00000471739 ADAMTSL3P82987 1691 aa20.1■□□□□ 0.81
FYCO1-204ENST00000471739 ARID4BQ4LE39 1312 aaPredicted RBP20.1■□□□□ 0.81
FYCO1-204ENST00000471739 ARHGEF40Q8TER5 1519 aa20.1■□□□□ 0.81
FYCO1-204ENST00000471739 RICTORQ6R327 1708 aa20.1■□□□□ 0.81
FYCO1-204ENST00000471739 PLCH2O75038 1416 aa20.09■□□□□ 0.81
FYCO1-204ENST00000471739 PTPRMP28827 1452 aa20.08■□□□□ 0.81
FYCO1-204ENST00000471739 ZMYM4Q5VZL5 1548 aa20.07■□□□□ 0.8
FYCO1-204ENST00000471739 BCORL1Q5H9F3 1711 aa20.05■□□□□ 0.8
FYCO1-204ENST00000471739 MAGI2Q86UL8 1455 aa20.04■□□□□ 0.8
FYCO1-204ENST00000471739 SCAPERQ9BY12 1400 aa20.03■□□□□ 0.8
FYCO1-204ENST00000471739 TROQ12816 1431 aaPredicted RBP20.02■□□□□ 0.8
FYCO1-204ENST00000471739 POGZQ7Z3K3 1410 aa20.02■□□□□ 0.8
FYCO1-204ENST00000471739 ZFYVE16Q7Z3T8 1539 aa20.02■□□□□ 0.8
FYCO1-204ENST00000471739 EFCAB2Q5VUJ9 269 aa20.02■□□□□ 0.8
FYCO1-204ENST00000471739 KIF14Q15058 1648 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms