RNA–Protein interactions for RNA: ENST00000471250.5

U2AF1-208, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 2

Gene U2AF1, Length 1,676 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-208ENST00000471250 MAGI1Q96QZ7 1491 aaPredicted RBP40.7■■■■■ 4.11
U2AF1-208ENST00000471250 TRIM26Q12899 539 aaPredicted RBP40.57■■■■■ 4.09
U2AF1-208ENST00000471250 EFCAB5A4FU69 1503 aa40.56■■■■■ 4.08
U2AF1-208ENST00000471250 SYNJ2O15056 1496 aa40.54■■■■■ 4.08
U2AF1-208ENST00000471250 GRIN2AQ12879 1464 aa40.54■■■■■ 4.08
U2AF1-208ENST00000471250 PCGF6Q9BYE7 350 aa40.5■■■■■ 4.07
U2AF1-208ENST00000471250 PPARGC1BQ86YN6 1023 aaKnown RBP40.49■■■■■ 4.07
U2AF1-208ENST00000471250 IQGAP2Q13576 1575 aa40.44■■■■■ 4.06
U2AF1-208ENST00000471250 SAMD9Q5K651 1589 aa40.42■■■■■ 4.06
U2AF1-208ENST00000471250 CHMP7Q8WUX9 453 aaPredicted RBP40.42■■■■■ 4.06
U2AF1-208ENST00000471250 KIAA0586Q9BVV6 1533 aa40.37■■■■■ 4.05
U2AF1-208ENST00000471250 APLP2Q06481 763 aa40.35■■■■■ 4.05
U2AF1-208ENST00000471250 FHOD3Q2V2M9 1422 aa40.34■■■■■ 4.05
U2AF1-208ENST00000471250 P3H3Q8IVL6 736 aa40.34■■■■■ 4.05
U2AF1-208ENST00000471250 CEP170Q5SW79 1584 aa40.29■■■■■ 4.04
U2AF1-208ENST00000471250 FBLN2P98095 1184 aa40.27■■■■■ 4.04
U2AF1-208ENST00000471250 UGGT2Q9NYU1 1516 aa40.27■■■■■ 4.04
U2AF1-208ENST00000471250 NUP160Q12769 1436 aa40.26■■■■■ 4.04
U2AF1-208ENST00000471250 FMN1Q68DA7 1419 aa40.18■■■■■ 4.02
U2AF1-208ENST00000471250 PCF11O94913 1555 aaKnown RBP40.16■■■■■ 4.02
U2AF1-208ENST00000471250 TTBK1Q5TCY1 1321 aaPredicted RBP40.15■■■■■ 4.02
U2AF1-208ENST00000471250 MAP3K1Q13233 1512 aa40.13■■■■■ 4.01
U2AF1-208ENST00000471250 CASKIN1Q8WXD9 1431 aa40.11■■■■■ 4.01
U2AF1-208ENST00000471250 CHD1O14646 1710 aa40.11■■■■■ 4.01
U2AF1-208ENST00000471250 FYCO1Q9BQS8 1478 aa40.1■■■■■ 4.01
U2AF1-208ENST00000471250 DISP1Q96F81 1524 aa40.04■■■■■ 4
U2AF1-208ENST00000471250 TIAM1Q13009 1591 aa40.04■■■■■ 4
U2AF1-208ENST00000471250 KIAA0556O60303 1618 aa40.03■■■■■ 4
U2AF1-208ENST00000471250 KANK4Q5T7N3 995 aaPredicted RBP40■■■■□ 3.99
U2AF1-208ENST00000471250 CFAP43Q8NDM7 1665 aa39.97■■■■□ 3.99
U2AF1-208ENST00000471250 JPH4Q96JJ6 628 aa39.94■■■■□ 3.98
U2AF1-208ENST00000471250 ATP1B4Q9UN42 357 aaPredicted RBP39.89■■■■□ 3.98
U2AF1-208ENST00000471250 CARMIL2Q6F5E8 1435 aa39.85■■■■□ 3.97
U2AF1-208ENST00000471250 LRRC9Q6ZRR7 1453 aa39.85■■■■□ 3.97
U2AF1-208ENST00000471250 LRRIQ1Q96JM4 1722 aa39.81■■■■□ 3.96
U2AF1-208ENST00000471250 HECW1Q76N89 1606 aa39.78■■■■□ 3.96
U2AF1-208ENST00000471250 SHROOM2Q13796 1616 aa39.72■■■■□ 3.95
U2AF1-208ENST00000471250 CCDC18Q5T9S5 1454 aa39.7■■■■□ 3.95
U2AF1-208ENST00000471250 PRG4Q92954 1404 aaPredicted RBP39.67■■■■□ 3.94
U2AF1-208ENST00000471250 CLASP1Q7Z460 1538 aa39.66■■■■□ 3.94
U2AF1-208ENST00000471250 RAPGEF6Q8TEU7 1601 aa39.65■■■■□ 3.94
U2AF1-208ENST00000471250 EPRSP07814 1512 aaKnown RBP39.62■■■■□ 3.93
U2AF1-208ENST00000471250 RRBP1Q9P2E9 1410 aaKnown RBP39.58■■■■□ 3.93
U2AF1-208ENST00000471250 MTUS2Q5JR59 1369 aa39.54■■■■□ 3.92
U2AF1-208ENST00000471250 NUP153P49790 1475 aaKnown RBP39.54■■■■□ 3.92
U2AF1-208ENST00000471250 EHBP1L1Q8N3D4 1523 aa39.51■■■■□ 3.92
U2AF1-208ENST00000471250 PLB1Q6P1J6 1458 aa39.51■■■■□ 3.91
U2AF1-208ENST00000471250 CDK13Q14004 1512 aaKnown RBP39.5■■■■□ 3.91
U2AF1-208ENST00000471250 ABCA8O94911 1581 aa39.47■■■■□ 3.91
U2AF1-208ENST00000471250 PHLDB1Q86UU1 1377 aa39.47■■■■□ 3.91
U2AF1-208ENST00000471250 MAGI3Q5TCQ9 1506 aa39.46■■■■□ 3.91
U2AF1-208ENST00000471250 PTPRGP23470 1445 aa39.44■■■■□ 3.9
U2AF1-208ENST00000471250 CCNB3Q8WWL7 1395 aa39.43■■■■□ 3.9
U2AF1-208ENST00000471250 SUPT6HQ7KZ85 1726 aaKnown RBP39.41■■■■□ 3.9
U2AF1-208ENST00000471250 ERCC6L2Q5T890 1561 aa39.4■■■■□ 3.9
U2AF1-208ENST00000471250 ARID3CA6NKF2 412 aa39.35■■■■□ 3.89
U2AF1-208ENST00000471250 HRCP23327 699 aa39.35■■■■□ 3.89
U2AF1-208ENST00000471250 NCOA2Q15596 1464 aa39.34■■■■□ 3.89
U2AF1-208ENST00000471250 HNRNPUL2Q1KMD3 747 aaKnown RBP39.32■■■■□ 3.89
U2AF1-208ENST00000471250 ARHGEF11O15085 1522 aa39.32■■■■□ 3.88
U2AF1-208ENST00000471250 CDK11AQ9UQ88 783 aaPredicted RBP39.26■■■■□ 3.88
U2AF1-208ENST00000471250 OSCARQ8IYS5 282 aa39.25■■■■□ 3.87
U2AF1-208ENST00000471250 UACAQ9BZF9 1416 aa39.23■■■■□ 3.87
U2AF1-208ENST00000471250 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP39.22■■■■□ 3.87
U2AF1-208ENST00000471250 ATP10BO94823 1461 aa39.2■■■■□ 3.87
U2AF1-208ENST00000471250 MYOM3Q5VTT5 1437 aa39.2■■■■□ 3.87
U2AF1-208ENST00000471250 FGD6Q6ZV73 1430 aa39.2■■■■□ 3.87
U2AF1-208ENST00000471250 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP39.19■■■■□ 3.86
U2AF1-208ENST00000471250 TROQ12816 1431 aaPredicted RBP39.16■■■■□ 3.86
U2AF1-208ENST00000471250 ABCC2Q92887 1545 aa39.11■■■■□ 3.85
U2AF1-208ENST00000471250 FAM50AQ14320 339 aaKnown RBP39.09■■■■□ 3.85
U2AF1-208ENST00000471250 ADCY10Q96PN6 1610 aa39.08■■■■□ 3.85
U2AF1-208ENST00000471250 UHRF1BP1LA0JNW5 1464 aa39.04■■■■□ 3.84
U2AF1-208ENST00000471250 PLEKHD1A6NEE1 506 aa39.03■■■■□ 3.84
U2AF1-208ENST00000471250 PTPN23Q9H3S7 1636 aa39.01■■■■□ 3.84
U2AF1-208ENST00000471250 MIA2Q96PC5 1412 aa39■■■■□ 3.83
U2AF1-208ENST00000471250 ITGAEP38570 1179 aa38.99■■■■□ 3.83
U2AF1-208ENST00000471250 TCOF1Q13428 1488 aaKnown RBP38.98■■■■□ 3.83
U2AF1-208ENST00000471250 KIF14Q15058 1648 aa38.96■■■■□ 3.83
U2AF1-208ENST00000471250 ZEB1P37275 1124 aaPredicted RBP38.94■■■■□ 3.82
U2AF1-208ENST00000471250 CCER1Q8TC90 406 aaPredicted RBP38.93■■■■□ 3.82
U2AF1-208ENST00000471250 KDM5BQ9UGL1 1544 aa38.87■■■■□ 3.81
U2AF1-208ENST00000471250 ITSN2Q9NZM3 1697 aa38.86■■■■□ 3.81
U2AF1-208ENST00000471250 ZCCHC11Q5TAX3 1644 aaKnown RBP38.84■■■■□ 3.81
U2AF1-208ENST00000471250 ABCC10Q5T3U5 1492 aa38.84■■■■□ 3.81
U2AF1-208ENST00000471250 GPATCH8Q9UKJ3 1502 aaKnown RBP38.82■■■■□ 3.81
U2AF1-208ENST00000471250 PTPRKQ15262 1439 aa38.75■■■■□ 3.79
U2AF1-208ENST00000471250 SETD5Q9C0A6 1442 aa38.74■■■■□ 3.79
U2AF1-208ENST00000471250 CDC42BPAQ5VT25 1732 aa38.74■■■■□ 3.79
U2AF1-208ENST00000471250 CFDP1Q9UEE9 299 aaPredicted RBP38.69■■■■□ 3.78
U2AF1-208ENST00000471250 RAB3GAP2Q9H2M9 1393 aa38.68■■■■□ 3.78
U2AF1-208ENST00000471250 CAMSAP2Q08AD1 1489 aa38.64■■■■□ 3.78
U2AF1-208ENST00000471250 ZNF644Q9H582 1327 aaPredicted RBP38.62■■■■□ 3.77
U2AF1-208ENST00000471250 DNMT1P26358 1616 aaKnown RBP38.61■■■■□ 3.77
U2AF1-208ENST00000471250 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP38.6■■■■□ 3.77
U2AF1-208ENST00000471250 HFM1A2PYH4 1435 aa38.59■■■■□ 3.77
U2AF1-208ENST00000471250 DHX57Q6P158 1386 aaKnown RBP38.58■■■■□ 3.77
U2AF1-208ENST00000471250 DAPK1P53355 1430 aa38.58■■■■□ 3.77
U2AF1-208ENST00000471250 PREX2Q70Z35 1606 aa38.57■■■■□ 3.76
U2AF1-208ENST00000471250 TTC37Q6PGP7 1564 aa38.56■■■■□ 3.76
Retrieved 100 of 20,778 RNA–protein pairs in 107.4 ms