RNA–Protein interactions for RNA: ENST00000471202.5

CHTF18-208, Transcript of chromosome transmission fidelity factor 18, humanhuman

TSL 2

Gene CHTF18, Length 4,494 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTF18-208ENST00000471202 SIN3AQ96ST3 1273 aa19.67■□□□□ 0.74
CHTF18-208ENST00000471202 CHMP7Q8WUX9 453 aaPredicted RBP19.65■□□□□ 0.74
CHTF18-208ENST00000471202 CCNB3Q8WWL7 1395 aa19.61■□□□□ 0.73
CHTF18-208ENST00000471202 CCDC136Q96JN2 1154 aa19.61■□□□□ 0.73
CHTF18-208ENST00000471202 WIZO95785 1651 aa19.61■□□□□ 0.73
CHTF18-208ENST00000471202 CHGAP10645 457 aaKnown RBP19.61■□□□□ 0.73
CHTF18-208ENST00000471202 VPS8Q8N3P4 1428 aa19.6■□□□□ 0.73
CHTF18-208ENST00000471202 BCL11AQ9H165 835 aa19.59■□□□□ 0.73
CHTF18-208ENST00000471202 ZBTB47Q9UFB7 747 aaPredicted RBP19.57■□□□□ 0.72
CHTF18-208ENST00000471202 NEFMP07197 916 aa19.57■□□□□ 0.72
CHTF18-208ENST00000471202 KANK4Q5T7N3 995 aaPredicted RBP19.55■□□□□ 0.72
CHTF18-208ENST00000471202 CARMIL1Q5VZK9 1371 aa19.53■□□□□ 0.72
CHTF18-208ENST00000471202 CUX2O14529 1486 aa19.51■□□□□ 0.71
CHTF18-208ENST00000471202 PLEKHD1A6NEE1 506 aa19.49■□□□□ 0.71
CHTF18-208ENST00000471202 CFDP1Q9UEE9 299 aaPredicted RBP19.48■□□□□ 0.71
CHTF18-208ENST00000471202 FHAD1B1AJZ9 1412 aa19.48■□□□□ 0.71
CHTF18-208ENST00000471202 SUPT16HQ9Y5B9 1047 aaKnown RBP19.46■□□□□ 0.71
CHTF18-208ENST00000471202 SENP3-EIF4A1A0A087X0R7 540 aa19.45■□□□□ 0.7
CHTF18-208ENST00000471202 WDR43Q15061 677 aaKnown RBP eCLIP19.44■□□□□ 0.7
CHTF18-208ENST00000471202 RGL3Q3MIN7 710 aa19.44■□□□□ 0.7
CHTF18-208ENST00000471202 SLC24A1O60721 1099 aa19.43■□□□□ 0.7
CHTF18-208ENST00000471202 NPM1P06748 294 aaKnown RBP eCLIP19.42■□□□□ 0.7
CHTF18-208ENST00000471202 TOP2AP11388 1531 aaKnown RBP19.42■□□□□ 0.7
CHTF18-208ENST00000471202 KCNH8Q96L42 1107 aa19.4■□□□□ 0.7
CHTF18-208ENST00000471202 NBR1Q14596 966 aa19.38■□□□□ 0.69
CHTF18-208ENST00000471202 TIMELESSQ9UNS1 1208 aa19.38■□□□□ 0.69
CHTF18-208ENST00000471202 STAG3Q9UJ98 1225 aa19.37■□□□□ 0.69
CHTF18-208ENST00000471202 SETD5Q9C0A6 1442 aa19.37■□□□□ 0.69
CHTF18-208ENST00000471202 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.37■□□□□ 0.69
CHTF18-208ENST00000471202 CARD11Q9BXL7 1154 aa19.35■□□□□ 0.69
CHTF18-208ENST00000471202 SMARCA2P51531 1590 aa19.32■□□□□ 0.68
CHTF18-208ENST00000471202 RUSC2Q8N2Y8 1516 aa19.32■□□□□ 0.68
CHTF18-208ENST00000471202 RAB3GAP2Q9H2M9 1393 aa19.31■□□□□ 0.68
CHTF18-208ENST00000471202 ESF1Q9H501 851 aaKnown RBP19.31■□□□□ 0.68
CHTF18-208ENST00000471202 UPF2Q9HAU5 1272 aaKnown RBP19.3■□□□□ 0.68
CHTF18-208ENST00000471202 RAPGEF2Q9Y4G8 1499 aa19.29■□□□□ 0.68
CHTF18-208ENST00000471202 SMARCA4P51532 1647 aa19.27■□□□□ 0.68
CHTF18-208ENST00000471202 DNAJC5BQ9UF47 199 aa19.27■□□□□ 0.68
CHTF18-208ENST00000471202 ARHGAP35Q9NRY4 1499 aa19.25■□□□□ 0.67
CHTF18-208ENST00000471202 ATAD2BQ9ULI0 1458 aa19.24■□□□□ 0.67
CHTF18-208ENST00000471202 CCER2I3L3R5 266 aa19.23■□□□□ 0.67
CHTF18-208ENST00000471202 ERCC6Q03468 1493 aa19.23■□□□□ 0.67
CHTF18-208ENST00000471202 EIF4G1Q04637 1599 aaKnown RBP19.22■□□□□ 0.67
CHTF18-208ENST00000471202 HSP90AA1P07900 732 aaKnown RBP19.21■□□□□ 0.67
CHTF18-208ENST00000471202 PPP4R2Q9NY27 417 aa19.21■□□□□ 0.67
CHTF18-208ENST00000471202 HSPA5P11021 654 aaKnown RBP19.2■□□□□ 0.66
CHTF18-208ENST00000471202 ANP32EQ9BTT0 268 aa19.2■□□□□ 0.66
CHTF18-208ENST00000471202 SENP3Q9H4L4 574 aaPredicted RBP19.19■□□□□ 0.66
CHTF18-208ENST00000471202 TDRD9Q8NDG6 1382 aaKnown RBP19.19■□□□□ 0.66
CHTF18-208ENST00000471202 FOXD1Q16676 465 aa19.19■□□□□ 0.66
CHTF18-208ENST00000471202 KNSTRNQ9Y448 316 aa19.19■□□□□ 0.66
CHTF18-208ENST00000471202 PPP1R15AO75807 674 aaPredicted RBP19.17■□□□□ 0.66
CHTF18-208ENST00000471202 B4GALNT3Q6L9W6 998 aa19.15■□□□□ 0.66
CHTF18-208ENST00000471202 DCAF11Q8TEB1 546 aa19.15■□□□□ 0.66
CHTF18-208ENST00000471202 CDCA8Q53HL2 280 aa19.14■□□□□ 0.65
CHTF18-208ENST00000471202 PLPPR3Q6T4P5 718 aa19.14■□□□□ 0.65
CHTF18-208ENST00000471202 FMN1Q68DA7 1419 aa19.13■□□□□ 0.65
CHTF18-208ENST00000471202 DHX57Q6P158 1386 aaKnown RBP19.13■□□□□ 0.65
CHTF18-208ENST00000471202 FHOD3Q2V2M9 1422 aa19.1■□□□□ 0.65
CHTF18-208ENST00000471202 MPHOSPH9Q99550 1183 aa19.1■□□□□ 0.65
CHTF18-208ENST00000471202 CADPSQ9ULU8 1353 aa19.1■□□□□ 0.65
CHTF18-208ENST00000471202 CC2D1BQ5T0F9 858 aaKnown RBP19.09■□□□□ 0.65
CHTF18-208ENST00000471202 PKD2Q13563 968 aa19.09■□□□□ 0.65
CHTF18-208ENST00000471202 EIF5BO60841 1220 aaKnown RBP19.05■□□□□ 0.64
CHTF18-208ENST00000471202 NEUROD2Q15784 382 aa19.04■□□□□ 0.64
CHTF18-208ENST00000471202 ARXQ96QS3 562 aa19.04■□□□□ 0.64
CHTF18-208ENST00000471202 L3MBTL2Q969R5 705 aa19.02■□□□□ 0.63
CHTF18-208ENST00000471202 CFAP53Q96M91 514 aa19.02■□□□□ 0.63
CHTF18-208ENST00000471202 ANP32BQ92688 251 aaKnown RBP19.01■□□□□ 0.63
CHTF18-208ENST00000471202 DDRGK1Q96HY6 314 aa19.01■□□□□ 0.63
CHTF18-208ENST00000471202 RBM19Q9Y4C8 960 aaKnown RBP19.01■□□□□ 0.63
CHTF18-208ENST00000471202 PDS5BQ9NTI5 1447 aa19.01■□□□□ 0.63
CHTF18-208ENST00000471202 TMF1P82094 1093 aa19■□□□□ 0.63
CHTF18-208ENST00000471202 TNNT2P45379 298 aaPredicted RBP18.96■□□□□ 0.63
CHTF18-208ENST00000471202 RGS3P49796 1198 aa18.96■□□□□ 0.63
CHTF18-208ENST00000471202 NUP155O75694 1391 aa18.94■□□□□ 0.62
CHTF18-208ENST00000471202 MYH16Q9H6N6 1097 aa18.94■□□□□ 0.62
CHTF18-208ENST00000471202 PPM1GO15355 546 aaPredicted RBP18.93■□□□□ 0.62
CHTF18-208ENST00000471202 BECN1Q14457 450 aa18.93■□□□□ 0.62
CHTF18-208ENST00000471202 NOP58Q9Y2X3 529 aaKnown RBP18.93■□□□□ 0.62
CHTF18-208ENST00000471202 TSHZ2Q9NRE2 1034 aa18.92■□□□□ 0.62
CHTF18-208ENST00000471202 FRAT1Q92837 279 aaPredicted RBP18.92■□□□□ 0.62
CHTF18-208ENST00000471202 LAS1LQ9Y4W2 734 aaKnown RBP18.9■□□□□ 0.62
CHTF18-208ENST00000471202 CARMIL2Q6F5E8 1435 aa18.9■□□□□ 0.62
CHTF18-208ENST00000471202 FTSJ3Q8IY81 847 aaKnown RBP18.89■□□□□ 0.61
CHTF18-208ENST00000471202 ANKRD30AQ9BXX3 1397 aa18.88■□□□□ 0.61
CHTF18-208ENST00000471202 IGF1RP08069 1367 aa18.88■□□□□ 0.61
CHTF18-208ENST00000471202 ERICH6BQ5W0A0 696 aa18.87■□□□□ 0.61
CHTF18-208ENST00000471202 KTN1Q86UP2 1357 aaKnown RBP18.85■□□□□ 0.61
CHTF18-208ENST00000471202 NUDCQ9Y266 331 aa18.85■□□□□ 0.61
CHTF18-208ENST00000471202 MAPK8IP3Q9UPT6 1336 aa18.85■□□□□ 0.61
CHTF18-208ENST00000471202 ROCK2O75116 1388 aaKnown RBP18.84■□□□□ 0.61
CHTF18-208ENST00000471202 POGKQ9P215 609 aa18.84■□□□□ 0.61
CHTF18-208ENST00000471202 FANCD2Q9BXW9 1451 aa18.82■□□□□ 0.6
CHTF18-208ENST00000471202 KIF21BO75037 1637 aa18.82■□□□□ 0.6
CHTF18-208ENST00000471202 U2SURPO15042 1029 aaKnown RBP18.82■□□□□ 0.6
CHTF18-208ENST00000471202 HNRNPMP52272 730 aaKnown RBP eCLIP18.81■□□□□ 0.61e-7■■■□□ 17.2
CHTF18-208ENST00000471202 RALBP1Q15311 655 aa18.81■□□□□ 0.6
CHTF18-208ENST00000471202 RCAN3Q9UKA8 241 aa18.8■□□□□ 0.6
CHTF18-208ENST00000471202 KANK1Q14678 1352 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms