RNA–Protein interactions for RNA: ENST00000471030.1

LSMEM1-204, Transcript of leucine rich single-pass membrane protein 1, humanhuman

TSL 3

Gene LSMEM1, Length 483 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1-204ENST00000471030 CREBZFQ9NS37 354 aa10.03□□□□□ -0.8
LSMEM1-204ENST00000471030 FARP1Q9Y4F1 1045 aaPredicted RBP10.02□□□□□ -0.81
LSMEM1-204ENST00000471030 WIZO95785 1651 aa10.02□□□□□ -0.81
LSMEM1-204ENST00000471030 VASPP50552 380 aaPredicted RBP10□□□□□ -0.81
LSMEM1-204ENST00000471030 LOC105371045A0A1W2PR82 267 aa9.99□□□□□ -0.81
LSMEM1-204ENST00000471030 PEG3Q9GZU2 1588 aa9.98□□□□□ -0.81
LSMEM1-204ENST00000471030 HRCP23327 699 aa9.98□□□□□ -0.81
LSMEM1-204ENST00000471030 TRIM26Q12899 539 aaPredicted RBP9.98□□□□□ -0.81
LSMEM1-204ENST00000471030 HAX1O00165 279 aa9.96□□□□□ -0.82
LSMEM1-204ENST00000471030 EEA1Q15075 1411 aa9.96□□□□□ -0.82
LSMEM1-204ENST00000471030 PAK3O75914 559 aaPredicted RBP9.95□□□□□ -0.82
LSMEM1-204ENST00000471030 CCDC88BA6NC98 1476 aa9.94□□□□□ -0.82
LSMEM1-204ENST00000471030 PCGF6Q9BYE7 350 aa9.94□□□□□ -0.82
LSMEM1-204ENST00000471030 KLHL34Q8N239 644 aa9.93□□□□□ -0.82
LSMEM1-204ENST00000471030 UNC13AQ9UPW8 1703 aa9.93□□□□□ -0.82
LSMEM1-204ENST00000471030 BICRAQ9NZM4 1560 aa9.92□□□□□ -0.82
LSMEM1-204ENST00000471030 SMARCA2P51531 1590 aa9.91□□□□□ -0.82
LSMEM1-204ENST00000471030 EIF4G1Q04637 1599 aaKnown RBP9.91□□□□□ -0.82
LSMEM1-204ENST00000471030 ZEB1P37275 1124 aaPredicted RBP9.89□□□□□ -0.83
LSMEM1-204ENST00000471030 MNX1P50219 401 aaPredicted RBP9.88□□□□□ -0.83
LSMEM1-204ENST00000471030 C19orf67A6NJJ6 358 aa9.87□□□□□ -0.83
LSMEM1-204ENST00000471030 CD44P16070 742 aaKnown RBP9.87□□□□□ -0.83
LSMEM1-204ENST00000471030 ATAD2BQ9ULI0 1458 aa9.85□□□□□ -0.83
LSMEM1-204ENST00000471030 CLCN6P51797 869 aa9.84□□□□□ -0.83
LSMEM1-204ENST00000471030 FAM9AQ8IZU1 332 aaPredicted RBP9.84□□□□□ -0.83
LSMEM1-204ENST00000471030 BAZ1BQ9UIG0 1483 aaKnown RBP9.84□□□□□ -0.83
LSMEM1-204ENST00000471030 SPOCK2Q92563 424 aa9.81□□□□□ -0.84
LSMEM1-204ENST00000471030 FAM212AQ96EL1 285 aa9.81□□□□□ -0.84
LSMEM1-204ENST00000471030 WRNQ14191 1432 aaPredicted RBP eCLIP9.8□□□□□ -0.84
LSMEM1-204ENST00000471030 ZRANB1Q9UGI0 708 aa9.79□□□□□ -0.84
LSMEM1-204ENST00000471030 TNIKQ9UKE5 1360 aa9.78□□□□□ -0.84
LSMEM1-204ENST00000471030 IFNLR1Q8IU57 520 aaPredicted RBP9.78□□□□□ -0.84
LSMEM1-204ENST00000471030 GSE1Q14687 1217 aa9.77□□□□□ -0.85
LSMEM1-204ENST00000471030 NCAPD3P42695 1498 aa9.77□□□□□ -0.85
LSMEM1-204ENST00000471030 SP7Q8TDD2 431 aaPredicted RBP9.76□□□□□ -0.85
LSMEM1-204ENST00000471030 HMGXB3Q12766 1538 aa9.76□□□□□ -0.85
LSMEM1-204ENST00000471030 NUBP1P53384 320 aa9.74□□□□□ -0.85
LSMEM1-204ENST00000471030 TSPYL2Q9H2G4 693 aaPredicted RBP9.74□□□□□ -0.85
LSMEM1-204ENST00000471030 ABCC8Q09428 1581 aa9.73□□□□□ -0.85
LSMEM1-204ENST00000471030 ZNF579Q8NAF0 562 aaKnown RBP9.73□□□□□ -0.85
LSMEM1-204ENST00000471030 GOLGA3Q08378 1498 aa9.72□□□□□ -0.85
LSMEM1-204ENST00000471030 DCAF8Q5TAQ9 597 aa9.72□□□□□ -0.85
LSMEM1-204ENST00000471030 CEP164Q9UPV0 1460 aa9.72□□□□□ -0.85
LSMEM1-204ENST00000471030 RASEFQ8IZ41 740 aa9.71□□□□□ -0.86
LSMEM1-204ENST00000471030 CEP162Q5TB80 1403 aa9.69□□□□□ -0.86
LSMEM1-204ENST00000471030 SOGA1O94964 1423 aa9.68□□□□□ -0.86
LSMEM1-204ENST00000471030 UBTFP17480 764 aaKnown RBP9.67□□□□□ -0.86
LSMEM1-204ENST00000471030 EVX2Q03828 476 aa9.66□□□□□ -0.86
LSMEM1-204ENST00000471030 CIZ1Q9ULV3 898 aaPredicted RBP9.66□□□□□ -0.86
LSMEM1-204ENST00000471030 CCDC61Q9Y6R9 512 aa9.66□□□□□ -0.86
LSMEM1-204ENST00000471030 KIF21BO75037 1637 aa9.65□□□□□ -0.86
LSMEM1-204ENST00000471030 SGIP1Q9BQI5 828 aa9.63□□□□□ -0.87
LSMEM1-204ENST00000471030 TOP2BQ02880 1626 aa9.63□□□□□ -0.87
LSMEM1-204ENST00000471030 CFTRP13569 1480 aa9.61□□□□□ -0.87
LSMEM1-204ENST00000471030 GABBR2O75899 941 aa9.61□□□□□ -0.87
LSMEM1-204ENST00000471030 PHF12Q96QT6 1004 aa9.61□□□□□ -0.87
LSMEM1-204ENST00000471030 SYNJ1O43426 1573 aa9.61□□□□□ -0.87
LSMEM1-204ENST00000471030 ERICH3Q5RHP9 1530 aa9.58□□□□□ -0.88
LSMEM1-204ENST00000471030 BIVM-ERCC5R4GMW8 1640 aa9.58□□□□□ -0.88
LSMEM1-204ENST00000471030 KIF12Q96FN5 646 aa9.58□□□□□ -0.88
LSMEM1-204ENST00000471030 KIF27Q86VH2 1401 aa9.57□□□□□ -0.88
LSMEM1-204ENST00000471030 CHRM1P11229 460 aaPredicted RBP9.57□□□□□ -0.88
LSMEM1-204ENST00000471030 CLIP1P30622 1438 aa9.56□□□□□ -0.88
LSMEM1-204ENST00000471030 CADPSQ9ULU8 1353 aa9.55□□□□□ -0.88
LSMEM1-204ENST00000471030 PYGBP11216 843 aa9.55□□□□□ -0.88
LSMEM1-204ENST00000471030 ZNF467Q7Z7K2 595 aaPredicted RBP9.55□□□□□ -0.88
LSMEM1-204ENST00000471030 DCBLD2Q96PD2 775 aa9.55□□□□□ -0.88
LSMEM1-204ENST00000471030 PCDHB13Q9Y5F0 798 aa9.55□□□□□ -0.88
LSMEM1-204ENST00000471030 RUSC2Q8N2Y8 1516 aa9.55□□□□□ -0.88
LSMEM1-204ENST00000471030 VPS8Q8N3P4 1428 aa9.54□□□□□ -0.88
LSMEM1-204ENST00000471030 PRXQ9BXM0 1461 aa9.53□□□□□ -0.88
LSMEM1-204ENST00000471030 MAP3K13O43283 966 aa9.53□□□□□ -0.88
LSMEM1-204ENST00000471030 TAOK2Q9UL54 1235 aa9.53□□□□□ -0.88
LSMEM1-204ENST00000471030 CCER1Q8TC90 406 aaPredicted RBP9.51□□□□□ -0.89
LSMEM1-204ENST00000471030 MS4A3Q96HJ5 214 aa9.51□□□□□ -0.89
LSMEM1-204ENST00000471030 PPARGC1BQ86YN6 1023 aaKnown RBP9.5□□□□□ -0.89
LSMEM1-204ENST00000471030 GALR2O43603 387 aaPredicted RBP9.49□□□□□ -0.89
LSMEM1-204ENST00000471030 RAPGEF2Q9Y4G8 1499 aa9.48□□□□□ -0.89
LSMEM1-204ENST00000471030 CUX1P39880 1505 aa9.48□□□□□ -0.89
LSMEM1-204ENST00000471030 ECM2O94769 699 aaPredicted RBP9.46□□□□□ -0.9
LSMEM1-204ENST00000471030 TIE1P35590 1138 aa9.46□□□□□ -0.9
LSMEM1-204ENST00000471030 IFNL1Q8IU54 200 aa9.45□□□□□ -0.9
LSMEM1-204ENST00000471030 PRDM2Q13029 1718 aa9.45□□□□□ -0.9
LSMEM1-204ENST00000471030 AMER1Q5JTC6 1135 aaPredicted RBP9.43□□□□□ -0.9
LSMEM1-204ENST00000471030 CLSPNQ9HAW4 1339 aa9.42□□□□□ -0.9
LSMEM1-204ENST00000471030 PDAP1Q13442 181 aaKnown RBP9.42□□□□□ -0.9
LSMEM1-204ENST00000471030 RIOK3O14730 519 aaKnown RBP9.41□□□□□ -0.9
LSMEM1-204ENST00000471030 IGF1RP08069 1367 aa9.4□□□□□ -0.9
LSMEM1-204ENST00000471030 ASTLQ6HA08 431 aaPredicted RBP9.4□□□□□ -0.9
LSMEM1-204ENST00000471030 PCDHB8Q9UN66 801 aa9.4□□□□□ -0.9
LSMEM1-204ENST00000471030 CC2D2AQ9P2K1 1620 aa9.4□□□□□ -0.9
LSMEM1-204ENST00000471030 VGFO15240 615 aaPredicted RBP9.39□□□□□ -0.91
LSMEM1-204ENST00000471030 GOLGA2Q08379 1002 aa9.39□□□□□ -0.91
LSMEM1-204ENST00000471030 PKD2Q13563 968 aa9.39□□□□□ -0.91
LSMEM1-204ENST00000471030 TMEM106CQ9BVX2 250 aa9.39□□□□□ -0.91
LSMEM1-204ENST00000471030 CUX2O14529 1486 aa9.39□□□□□ -0.91
LSMEM1-204ENST00000471030 FANCD2Q9BXW9 1451 aa9.39□□□□□ -0.91
LSMEM1-204ENST00000471030 MAP3K1Q13233 1512 aa9.38□□□□□ -0.91
LSMEM1-204ENST00000471030 PLSCR2Q9NRY7 297 aa9.38□□□□□ -0.91
LSMEM1-204ENST00000471030 CARMIL1Q5VZK9 1371 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms