RNA–Protein interactions for RNA: ENST00000470904.5

KPNA1-205, Transcript of karyopherin subunit alpha 1, humanhuman

TSL 2

Gene KPNA1, Length 3,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-205ENST00000470904 ARID3CA6NKF2 412 aa9.41□□□□□ -0.9
KPNA1-205ENST00000470904 CYB5RLQ6IPT4 315 aa9.41□□□□□ -0.9
KPNA1-205ENST00000470904 CEP170Q5SW79 1584 aa9.4□□□□□ -0.9
KPNA1-205ENST00000470904 JPH4Q96JJ6 628 aa9.38□□□□□ -0.91
KPNA1-205ENST00000470904 ERCC6L2Q5T890 1561 aa9.37□□□□□ -0.91
KPNA1-205ENST00000470904 CUL7Q14999 1698 aa9.36□□□□□ -0.91
KPNA1-205ENST00000470904 PRXQ9BXM0 1461 aa9.36□□□□□ -0.91
KPNA1-205ENST00000470904 ATP1B4Q9UN42 357 aaPredicted RBP9.34□□□□□ -0.91
KPNA1-205ENST00000470904 NUP160Q12769 1436 aa9.33□□□□□ -0.92
KPNA1-205ENST00000470904 PRG4Q92954 1404 aaPredicted RBP9.33□□□□□ -0.92
KPNA1-205ENST00000470904 EEA1Q15075 1411 aa9.32□□□□□ -0.92
KPNA1-205ENST00000470904 ARHGEF11O15085 1522 aa9.32□□□□□ -0.92
KPNA1-205ENST00000470904 RIMBP3CA6NJZ7 1639 aa9.3□□□□□ -0.92
KPNA1-205ENST00000470904 RIMBP3BA6NNM3 1639 aa9.3□□□□□ -0.92
KPNA1-205ENST00000470904 RIMBP3Q9UFD9 1639 aa9.3□□□□□ -0.92
KPNA1-205ENST00000470904 GOLGA3Q08378 1498 aa9.3□□□□□ -0.92
KPNA1-205ENST00000470904 CLASP1Q7Z460 1538 aa9.29□□□□□ -0.92
KPNA1-205ENST00000470904 IQGAP2Q13576 1575 aa9.29□□□□□ -0.92
KPNA1-205ENST00000470904 KIAA0586Q9BVV6 1533 aa9.29□□□□□ -0.92
KPNA1-205ENST00000470904 CTTNBP2Q8WZ74 1663 aa9.27□□□□□ -0.93
KPNA1-205ENST00000470904 FHOD3Q2V2M9 1422 aa9.27□□□□□ -0.93
KPNA1-205ENST00000470904 KIF21BO75037 1637 aa9.26□□□□□ -0.93
KPNA1-205ENST00000470904 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.26□□□□□ -0.93
KPNA1-205ENST00000470904 HNRNPUL2Q1KMD3 747 aaKnown RBP9.26□□□□□ -0.93
KPNA1-205ENST00000470904 ARAP1Q96P48 1450 aa9.26□□□□□ -0.93
KPNA1-205ENST00000470904 CEP162Q5TB80 1403 aa9.23□□□□□ -0.93
KPNA1-205ENST00000470904 DISP1Q96F81 1524 aa9.23□□□□□ -0.93
KPNA1-205ENST00000470904 PTPRGP23470 1445 aa9.22□□□□□ -0.93
KPNA1-205ENST00000470904 TRHP20396 242 aaPredicted RBP9.21□□□□□ -0.93
KPNA1-205ENST00000470904 CARMIL2Q6F5E8 1435 aa9.21□□□□□ -0.93
KPNA1-205ENST00000470904 PLB1Q6P1J6 1458 aa9.21□□□□□ -0.93
KPNA1-205ENST00000470904 CLIP1P30622 1438 aa9.2□□□□□ -0.94
KPNA1-205ENST00000470904 SHROOM2Q13796 1616 aa9.19□□□□□ -0.94
KPNA1-205ENST00000470904 KIAA0556O60303 1618 aa9.19□□□□□ -0.94
KPNA1-205ENST00000470904 ARHGAP35Q9NRY4 1499 aa9.19□□□□□ -0.94
KPNA1-205ENST00000470904 KCNH8Q96L42 1107 aa9.18□□□□□ -0.94
KPNA1-205ENST00000470904 TNIKQ9UKE5 1360 aa9.18□□□□□ -0.94
KPNA1-205ENST00000470904 TRIM26Q12899 539 aaPredicted RBP9.17□□□□□ -0.94
KPNA1-205ENST00000470904 UGGT2Q9NYU1 1516 aa9.17□□□□□ -0.94
KPNA1-205ENST00000470904 APLP2Q06481 763 aa9.16□□□□□ -0.94
KPNA1-205ENST00000470904 NPM1P06748 294 aaKnown RBP eCLIP9.16□□□□□ -0.94
KPNA1-205ENST00000470904 ADCY10Q96PN6 1610 aa9.12□□□□□ -0.95
KPNA1-205ENST00000470904 SAMD9Q5K651 1589 aa9.12□□□□□ -0.95
KPNA1-205ENST00000470904 UACAQ9BZF9 1416 aa9.12□□□□□ -0.95
KPNA1-205ENST00000470904 CDK13Q14004 1512 aaKnown RBP9.11□□□□□ -0.95
KPNA1-205ENST00000470904 ITGAEP38570 1179 aa9.1□□□□□ -0.95
KPNA1-205ENST00000470904 FAM69CQ0P6D2 419 aa9.09□□□□□ -0.95
KPNA1-205ENST00000470904 PCF11O94913 1555 aaKnown RBP9.08□□□□□ -0.96
KPNA1-205ENST00000470904 TSPOAP1O95153 1857 aa9.07□□□□□ -0.96
KPNA1-205ENST00000470904 EFCAB5A4FU69 1503 aa9.07□□□□□ -0.96
KPNA1-205ENST00000470904 NUP153P49790 1475 aaKnown RBP9.07□□□□□ -0.96
KPNA1-205ENST00000470904 KANK4Q5T7N3 995 aaPredicted RBP9.07□□□□□ -0.96
KPNA1-205ENST00000470904 RAPGEF6Q8TEU7 1601 aa9.06□□□□□ -0.96
KPNA1-205ENST00000470904 ABCC2Q92887 1545 aa9.06□□□□□ -0.96
KPNA1-205ENST00000470904 FMN1Q68DA7 1419 aa9.06□□□□□ -0.96
KPNA1-205ENST00000470904 ATP10BO94823 1461 aa9.05□□□□□ -0.96
KPNA1-205ENST00000470904 ASXL2Q76L83 1435 aa9.05□□□□□ -0.96
KPNA1-205ENST00000470904 ABCA8O94911 1581 aa9.05□□□□□ -0.96
KPNA1-205ENST00000470904 ZCCHC11Q5TAX3 1644 aaKnown RBP9.04□□□□□ -0.96
KPNA1-205ENST00000470904 LRRIQ1Q96JM4 1722 aa9.04□□□□□ -0.96
KPNA1-205ENST00000470904 PLEKHD1A6NEE1 506 aa9.03□□□□□ -0.96
KPNA1-205ENST00000470904 ZNF777Q9ULD5 760 aaPredicted RBP9.02□□□□□ -0.97
KPNA1-205ENST00000470904 EPRSP07814 1512 aaKnown RBP9.02□□□□□ -0.97
KPNA1-205ENST00000470904 VPS8Q8N3P4 1428 aa9.02□□□□□ -0.97
KPNA1-205ENST00000470904 MTUS2Q5JR59 1369 aa9□□□□□ -0.97
KPNA1-205ENST00000470904 KDM5BQ9UGL1 1544 aa9□□□□□ -0.97
KPNA1-205ENST00000470904 CASKIN1Q8WXD9 1431 aa8.99□□□□□ -0.97
KPNA1-205ENST00000470904 HECW1Q76N89 1606 aa8.99□□□□□ -0.97
KPNA1-205ENST00000470904 MAGI3Q5TCQ9 1506 aa8.99□□□□□ -0.97
KPNA1-205ENST00000470904 HRCP23327 699 aa8.98□□□□□ -0.97
KPNA1-205ENST00000470904 CCER1Q8TC90 406 aaPredicted RBP8.98□□□□□ -0.97
KPNA1-205ENST00000470904 CDK11AQ9UQ88 783 aaPredicted RBP8.97□□□□□ -0.97
KPNA1-205ENST00000470904 UHRF1BP1LA0JNW5 1464 aa8.97□□□□□ -0.97
KPNA1-205ENST00000470904 WDR7Q9Y4E6 1490 aa8.97□□□□□ -0.97
KPNA1-205ENST00000470904 KIF14Q15058 1648 aa8.97□□□□□ -0.97
KPNA1-205ENST00000470904 KIF13AQ9H1H9 1805 aa8.97□□□□□ -0.97
KPNA1-205ENST00000470904 FYCO1Q9BQS8 1478 aa8.96□□□□□ -0.97
KPNA1-205ENST00000470904 FAM50AQ14320 339 aaKnown RBP8.96□□□□□ -0.98
KPNA1-205ENST00000470904 ZNF644Q9H582 1327 aaPredicted RBP8.95□□□□□ -0.98
KPNA1-205ENST00000470904 MYT1LQ9UL68 1186 aa8.94□□□□□ -0.98
KPNA1-205ENST00000470904 DIP2BQ9P265 1576 aa8.94□□□□□ -0.98
KPNA1-205ENST00000470904 ABCC10Q5T3U5 1492 aa8.94□□□□□ -0.98
KPNA1-205ENST00000470904 RAPGEF3O95398 923 aa8.94□□□□□ -0.98
KPNA1-205ENST00000470904 MAPKBP1O60336 1514 aa8.93□□□□□ -0.98
KPNA1-205ENST00000470904 CD109Q6YHK3 1445 aa8.93□□□□□ -0.98
KPNA1-205ENST00000470904 TTC37Q6PGP7 1564 aa8.93□□□□□ -0.98
KPNA1-205ENST00000470904 TROQ12816 1431 aaPredicted RBP8.92□□□□□ -0.98
KPNA1-205ENST00000470904 TIAM1Q13009 1591 aa8.92□□□□□ -0.98
KPNA1-205ENST00000470904 CFDP1Q9UEE9 299 aaPredicted RBP8.91□□□□□ -0.98
KPNA1-205ENST00000470904 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.91□□□□□ -0.98
KPNA1-205ENST00000470904 CCDC18Q5T9S5 1454 aa8.9□□□□□ -0.98
KPNA1-205ENST00000470904 HNRNPMP52272 730 aaKnown RBP eCLIP8.9□□□□□ -0.99
KPNA1-205ENST00000470904 LRRC9Q6ZRR7 1453 aa8.9□□□□□ -0.99
KPNA1-205ENST00000470904 AFAP1Q8N556 730 aa8.89□□□□□ -0.99
KPNA1-205ENST00000470904 CCNB3Q8WWL7 1395 aa8.89□□□□□ -0.99
KPNA1-205ENST00000470904 ARHGAP5Q13017 1502 aa8.88□□□□□ -0.99
KPNA1-205ENST00000470904 NCOA2Q15596 1464 aa8.88□□□□□ -0.99
KPNA1-205ENST00000470904 PHLDB1Q86UU1 1377 aa8.88□□□□□ -0.99
KPNA1-205ENST00000470904 PLPPR3Q6T4P5 718 aa8.88□□□□□ -0.99
KPNA1-205ENST00000470904 CHIC2Q9UKJ5 165 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms