RNA–Protein interactions for RNA: ENST00000470160.1

KDM3A-210, Transcript of lysine demethylase 3A, humanhuman

TSL 2

Gene KDM3A, Length 2,955 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-210ENST00000470160 AQRO60306 1485 aaKnown RBP eCLIP11.06□□□□□ -0.644e-7■■■■□ 24.7
KDM3A-210ENST00000470160 ZNF608Q9ULD9 1512 aaPredicted RBP11.05□□□□□ -0.64
KDM3A-210ENST00000470160 UGGT2Q9NYU1 1516 aa11.01□□□□□ -0.65
KDM3A-210ENST00000470160 CFAP43Q8NDM7 1665 aa11.01□□□□□ -0.65
KDM3A-210ENST00000470160 EHMT2Q96KQ7 1210 aa11□□□□□ -0.65
KDM3A-210ENST00000470160 IQGAP2Q13576 1575 aa11□□□□□ -0.65
KDM3A-210ENST00000470160 SLC24A1O60721 1099 aa11□□□□□ -0.65
KDM3A-210ENST00000470160 SYNJ2O15056 1496 aa10.99□□□□□ -0.65
KDM3A-210ENST00000470160 GRIN2AQ12879 1464 aa10.98□□□□□ -0.65
KDM3A-210ENST00000470160 SNAPC4Q5SXM2 1469 aa10.98□□□□□ -0.65
KDM3A-210ENST00000470160 KIAA0586Q9BVV6 1533 aa10.98□□□□□ -0.65
KDM3A-210ENST00000470160 FYCO1Q9BQS8 1478 aa10.97□□□□□ -0.65
KDM3A-210ENST00000470160 TIAM1Q13009 1591 aa10.96□□□□□ -0.65
KDM3A-210ENST00000470160 NUP160Q12769 1436 aa10.96□□□□□ -0.66
KDM3A-210ENST00000470160 CASKIN1Q8WXD9 1431 aa10.96□□□□□ -0.66
KDM3A-210ENST00000470160 FMN1Q68DA7 1419 aa10.95□□□□□ -0.66
KDM3A-210ENST00000470160 PCF11O94913 1555 aaKnown RBP10.94□□□□□ -0.66
KDM3A-210ENST00000470160 PCGF6Q9BYE7 350 aa10.94□□□□□ -0.66
KDM3A-210ENST00000470160 CEP170Q5SW79 1584 aa10.93□□□□□ -0.66
KDM3A-210ENST00000470160 KIAA0556O60303 1618 aa10.91□□□□□ -0.66
KDM3A-210ENST00000470160 LRRIQ1Q96JM4 1722 aa10.9□□□□□ -0.66
KDM3A-210ENST00000470160 DISP1Q96F81 1524 aa10.89□□□□□ -0.67
KDM3A-210ENST00000470160 RRBP1Q9P2E9 1410 aaKnown RBP10.88□□□□□ -0.67
KDM3A-210ENST00000470160 LRRC9Q6ZRR7 1453 aa10.88□□□□□ -0.67
KDM3A-210ENST00000470160 FHOD3Q2V2M9 1422 aa10.87□□□□□ -0.67
KDM3A-210ENST00000470160 SHROOM2Q13796 1616 aa10.87□□□□□ -0.67
KDM3A-210ENST00000470160 HECW1Q76N89 1606 aa10.86□□□□□ -0.67
KDM3A-210ENST00000470160 CCDC18Q5T9S5 1454 aa10.86□□□□□ -0.67
KDM3A-210ENST00000470160 CHD1O14646 1710 aa10.85□□□□□ -0.67
KDM3A-210ENST00000470160 APLP2Q06481 763 aa10.84□□□□□ -0.67
KDM3A-210ENST00000470160 ARHGEF11O15085 1522 aa10.83□□□□□ -0.68
KDM3A-210ENST00000470160 HRCP23327 699 aa10.83□□□□□ -0.68
KDM3A-210ENST00000470160 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.83□□□□□ -0.68
KDM3A-210ENST00000470160 EHBP1L1Q8N3D4 1523 aa10.81□□□□□ -0.68
KDM3A-210ENST00000470160 RAPGEF6Q8TEU7 1601 aa10.8□□□□□ -0.68
KDM3A-210ENST00000470160 KANK4Q5T7N3 995 aaPredicted RBP10.8□□□□□ -0.68
KDM3A-210ENST00000470160 CLASP1Q7Z460 1538 aa10.79□□□□□ -0.68
KDM3A-210ENST00000470160 SUPT6HQ7KZ85 1726 aaKnown RBP10.78□□□□□ -0.68
KDM3A-210ENST00000470160 CHMP7Q8WUX9 453 aaPredicted RBP10.78□□□□□ -0.68
KDM3A-210ENST00000470160 ABCA8O94911 1581 aa10.78□□□□□ -0.68
KDM3A-210ENST00000470160 EPRSP07814 1512 aaKnown RBP10.77□□□□□ -0.68
KDM3A-210ENST00000470160 CARMIL2Q6F5E8 1435 aa10.77□□□□□ -0.69
KDM3A-210ENST00000470160 ADCY10Q96PN6 1610 aa10.76□□□□□ -0.69
KDM3A-210ENST00000470160 AEBP2Q6ZN18 517 aaPredicted RBP10.76□□□□□ -0.69
KDM3A-210ENST00000470160 ZEB1P37275 1124 aaPredicted RBP10.74□□□□□ -0.69
KDM3A-210ENST00000470160 RANGAP1P46060 587 aaPredicted RBP10.74□□□□□ -0.69
KDM3A-210ENST00000470160 MAGI3Q5TCQ9 1506 aa10.74□□□□□ -0.69
KDM3A-210ENST00000470160 NUP153P49790 1475 aaKnown RBP10.74□□□□□ -0.69
KDM3A-210ENST00000470160 CCNB3Q8WWL7 1395 aa10.74□□□□□ -0.69
KDM3A-210ENST00000470160 PPARGC1BQ86YN6 1023 aaKnown RBP10.74□□□□□ -0.69
KDM3A-210ENST00000470160 PELP1Q8IZL8 1130 aaKnown RBP10.74□□□□□ -0.69
KDM3A-210ENST00000470160 JPH4Q96JJ6 628 aa10.72□□□□□ -0.69
KDM3A-210ENST00000470160 PHLDB1Q86UU1 1377 aa10.71□□□□□ -0.69
KDM3A-210ENST00000470160 TCOF1Q13428 1488 aaKnown RBP10.71□□□□□ -0.69
KDM3A-210ENST00000470160 MYT1Q01538 1121 aa10.71□□□□□ -0.69
KDM3A-210ENST00000470160 P3H3Q8IVL6 736 aa10.71□□□□□ -0.7
KDM3A-210ENST00000470160 NCOA2Q15596 1464 aa10.7□□□□□ -0.7
KDM3A-210ENST00000470160 MIA2Q96PC5 1412 aa10.69□□□□□ -0.7
KDM3A-210ENST00000470160 MYOM3Q5VTT5 1437 aa10.68□□□□□ -0.7
KDM3A-210ENST00000470160 FGD6Q6ZV73 1430 aa10.68□□□□□ -0.7
KDM3A-210ENST00000470160 PRG4Q92954 1404 aaPredicted RBP10.67□□□□□ -0.7
KDM3A-210ENST00000470160 UHRF1BP1LA0JNW5 1464 aa10.67□□□□□ -0.7
KDM3A-210ENST00000470160 CDK13Q14004 1512 aaKnown RBP10.66□□□□□ -0.7
KDM3A-210ENST00000470160 MTUS2Q5JR59 1369 aa10.66□□□□□ -0.7
KDM3A-210ENST00000470160 ITSN2Q9NZM3 1697 aa10.65□□□□□ -0.7
KDM3A-210ENST00000470160 PTPN23Q9H3S7 1636 aa10.65□□□□□ -0.7
KDM3A-210ENST00000470160 TROQ12816 1431 aaPredicted RBP10.64□□□□□ -0.71
KDM3A-210ENST00000470160 CLSPNQ9HAW4 1339 aa10.64□□□□□ -0.71
KDM3A-210ENST00000470160 PLB1Q6P1J6 1458 aa10.64□□□□□ -0.71
KDM3A-210ENST00000470160 AKNAQ7Z591 1439 aa10.63□□□□□ -0.71
KDM3A-210ENST00000470160 ABCC2Q92887 1545 aa10.62□□□□□ -0.71
KDM3A-210ENST00000470160 ATP10BO94823 1461 aa10.62□□□□□ -0.71
KDM3A-210ENST00000470160 PTPRGP23470 1445 aa10.61□□□□□ -0.71
KDM3A-210ENST00000470160 UACAQ9BZF9 1416 aa10.61□□□□□ -0.71
KDM3A-210ENST00000470160 ABCC10Q5T3U5 1492 aa10.6□□□□□ -0.71
KDM3A-210ENST00000470160 PRKCSHP14314 528 aaPredicted RBP10.6□□□□□ -0.71
KDM3A-210ENST00000470160 FBLN2P98095 1184 aa10.6□□□□□ -0.71
KDM3A-210ENST00000470160 GCC2Q8IWJ2 1684 aa10.6□□□□□ -0.71
KDM3A-210ENST00000470160 ERCC6L2Q5T890 1561 aa10.6□□□□□ -0.71
KDM3A-210ENST00000470160 CDK11AQ9UQ88 783 aaPredicted RBP10.59□□□□□ -0.71
KDM3A-210ENST00000470160 DNMT1P26358 1616 aaKnown RBP10.59□□□□□ -0.71
KDM3A-210ENST00000470160 KIF14Q15058 1648 aa10.59□□□□□ -0.71
KDM3A-210ENST00000470160 KDM5BQ9UGL1 1544 aa10.58□□□□□ -0.72
KDM3A-210ENST00000470160 CDC42BPAQ5VT25 1732 aa10.58□□□□□ -0.72
KDM3A-210ENST00000470160 SETD5Q9C0A6 1442 aa10.57□□□□□ -0.72
KDM3A-210ENST00000470160 CROCC2H7BZ55 1655 aa10.57□□□□□ -0.72
KDM3A-210ENST00000470160 TTBK1Q5TCY1 1321 aaPredicted RBP10.57□□□□□ -0.72
KDM3A-210ENST00000470160 HFM1A2PYH4 1435 aa10.56□□□□□ -0.72
KDM3A-210ENST00000470160 ACIN1Q9UKV3 1341 aaKnown RBP10.56□□□□□ -0.72
KDM3A-210ENST00000470160 GPATCH8Q9UKJ3 1502 aaKnown RBP10.56□□□□□ -0.72
KDM3A-210ENST00000470160 DHX57Q6P158 1386 aaKnown RBP10.55□□□□□ -0.72
KDM3A-210ENST00000470160 PREX2Q70Z35 1606 aa10.55□□□□□ -0.72
KDM3A-210ENST00000470160 ZCCHC11Q5TAX3 1644 aaKnown RBP10.54□□□□□ -0.72
KDM3A-210ENST00000470160 ROCK1Q13464 1354 aa10.54□□□□□ -0.72
KDM3A-210ENST00000470160 PTPRKQ15262 1439 aa10.54□□□□□ -0.72
KDM3A-210ENST00000470160 ADGBQ8N7X0 1667 aa10.54□□□□□ -0.72
KDM3A-210ENST00000470160 ARAP3Q8WWN8 1544 aa10.53□□□□□ -0.72
KDM3A-210ENST00000470160 ATP1B4Q9UN42 357 aaPredicted RBP10.53□□□□□ -0.72
KDM3A-210ENST00000470160 ARHGEF5Q12774 1597 aa10.53□□□□□ -0.72
KDM3A-210ENST00000470160 HNRNPUL2Q1KMD3 747 aaKnown RBP10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms