RNA–Protein interactions for RNA: ENST00000469976.2

LDHA-208, Transcript of lactate dehydrogenase A, humanhuman

TSL 2

Gene LDHA, Length 656 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-208ENST00000469976 TIAM1Q13009 1591 aa17■□□□□ 0.31
LDHA-208ENST00000469976 PBRM1Q86U86 1689 aa17■□□□□ 0.31
LDHA-208ENST00000469976 FHAD1B1AJZ9 1412 aa16.96■□□□□ 0.31
LDHA-208ENST00000469976 GAPVD1Q14C86 1478 aa16.96■□□□□ 0.31
LDHA-208ENST00000469976 RRBP1Q9P2E9 1410 aaKnown RBP16.95■□□□□ 0.3
LDHA-208ENST00000469976 PCF11O94913 1555 aaKnown RBP16.94■□□□□ 0.3
LDHA-208ENST00000469976 MRC2Q9UBG0 1479 aa16.94■□□□□ 0.3
LDHA-208ENST00000469976 AQRO60306 1485 aaKnown RBP eCLIP16.93■□□□□ 0.38e-13■■■■□ 25.2
LDHA-208ENST00000469976 SAMD9Q5K651 1589 aa16.92■□□□□ 0.3
LDHA-208ENST00000469976 DNAJC5BQ9UF47 199 aa16.91■□□□□ 0.3
LDHA-208ENST00000469976 FYCO1Q9BQS8 1478 aa16.89■□□□□ 0.29
LDHA-208ENST00000469976 KANK4Q5T7N3 995 aaPredicted RBP16.89■□□□□ 0.29
LDHA-208ENST00000469976 WDR62O43379 1518 aa16.86■□□□□ 0.29
LDHA-208ENST00000469976 HNRNPUL2Q1KMD3 747 aaKnown RBP16.86■□□□□ 0.29
LDHA-208ENST00000469976 TDRD9Q8NDG6 1382 aaKnown RBP16.86■□□□□ 0.29
LDHA-208ENST00000469976 LRRC9Q6ZRR7 1453 aa16.86■□□□□ 0.29
LDHA-208ENST00000469976 ADAMTS12P58397 1594 aa16.85■□□□□ 0.29
LDHA-208ENST00000469976 CASKIN1Q8WXD9 1431 aa16.85■□□□□ 0.29
LDHA-208ENST00000469976 THOC2Q8NI27 1593 aaKnown RBP16.82■□□□□ 0.28
LDHA-208ENST00000469976 FHOD3Q2V2M9 1422 aa16.82■□□□□ 0.28
LDHA-208ENST00000469976 FMN1Q68DA7 1419 aa16.82■□□□□ 0.28
LDHA-208ENST00000469976 CCNB3Q8WWL7 1395 aa16.81■□□□□ 0.28
LDHA-208ENST00000469976 IFT140Q96RY7 1462 aa16.8■□□□□ 0.28
LDHA-208ENST00000469976 LRRIQ1Q96JM4 1722 aa16.79■□□□□ 0.28
LDHA-208ENST00000469976 SNAPC4Q5SXM2 1469 aa16.78■□□□□ 0.28
LDHA-208ENST00000469976 CLSPNQ9HAW4 1339 aa16.77■□□□□ 0.28
LDHA-208ENST00000469976 GRIN2BQ13224 1484 aa16.77■□□□□ 0.28
LDHA-208ENST00000469976 IQGAP2Q13576 1575 aa16.75■□□□□ 0.27
LDHA-208ENST00000469976 EIF4G3O43432 1585 aaKnown RBP16.7■□□□□ 0.26
LDHA-208ENST00000469976 P3H3Q8IVL6 736 aa16.7■□□□□ 0.26
LDHA-208ENST00000469976 DHX57Q6P158 1386 aaKnown RBP16.69■□□□□ 0.26
LDHA-208ENST00000469976 PHLDB1Q86UU1 1377 aa16.68■□□□□ 0.26
LDHA-208ENST00000469976 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.68■□□□□ 0.26
LDHA-208ENST00000469976 HECW1Q76N89 1606 aa16.68■□□□□ 0.26
LDHA-208ENST00000469976 SUPT6HQ7KZ85 1726 aaKnown RBP16.67■□□□□ 0.26
LDHA-208ENST00000469976 UGGT2Q9NYU1 1516 aa16.67■□□□□ 0.26
LDHA-208ENST00000469976 PLPPR3Q6T4P5 718 aa16.67■□□□□ 0.26
LDHA-208ENST00000469976 EHBP1L1Q8N3D4 1523 aa16.66■□□□□ 0.26
LDHA-208ENST00000469976 CCDC18Q5T9S5 1454 aa16.65■□□□□ 0.26
LDHA-208ENST00000469976 ZNF608Q9ULD9 1512 aaPredicted RBP16.65■□□□□ 0.26
LDHA-208ENST00000469976 ERCC6Q03468 1493 aa16.64■□□□□ 0.25
LDHA-208ENST00000469976 MSH5O43196 834 aa16.63■□□□□ 0.25
LDHA-208ENST00000469976 ZNF316A6NFI3 1004 aaPredicted RBP16.6■□□□□ 0.25
LDHA-208ENST00000469976 MAGI1Q96QZ7 1491 aaPredicted RBP16.6■□□□□ 0.25
LDHA-208ENST00000469976 SETD5Q9C0A6 1442 aa16.59■□□□□ 0.25
LDHA-208ENST00000469976 KIAA0586Q9BVV6 1533 aa16.59■□□□□ 0.25
LDHA-208ENST00000469976 KIAA0556O60303 1618 aa16.59■□□□□ 0.25
LDHA-208ENST00000469976 ATP1B4Q9UN42 357 aaPredicted RBP16.58■□□□□ 0.24
LDHA-208ENST00000469976 GRIN2AQ12879 1464 aa16.58■□□□□ 0.24
LDHA-208ENST00000469976 ARHGEF11O15085 1522 aa16.58■□□□□ 0.24
LDHA-208ENST00000469976 FGD6Q6ZV73 1430 aa16.57■□□□□ 0.24
LDHA-208ENST00000469976 MTUS2Q5JR59 1369 aa16.57■□□□□ 0.24
LDHA-208ENST00000469976 RAB3GAP2Q9H2M9 1393 aa16.56■□□□□ 0.24
LDHA-208ENST00000469976 NCOA2Q15596 1464 aa16.54■□□□□ 0.24
LDHA-208ENST00000469976 DIEXFQ68CQ4 756 aaKnown RBP16.54■□□□□ 0.24
LDHA-208ENST00000469976 MYOM3Q5VTT5 1437 aa16.53■□□□□ 0.24
LDHA-208ENST00000469976 EPRSP07814 1512 aaKnown RBP16.52■□□□□ 0.24
LDHA-208ENST00000469976 MAGI3Q5TCQ9 1506 aa16.52■□□□□ 0.24
LDHA-208ENST00000469976 PTPN23Q9H3S7 1636 aa16.52■□□□□ 0.23
LDHA-208ENST00000469976 MAPKBP1O60336 1514 aa16.51■□□□□ 0.23
LDHA-208ENST00000469976 SYNJ2O15056 1496 aa16.51■□□□□ 0.23
LDHA-208ENST00000469976 DISP1Q96F81 1524 aa16.5■□□□□ 0.23
LDHA-208ENST00000469976 RAPGEF6Q8TEU7 1601 aa16.5■□□□□ 0.23
LDHA-208ENST00000469976 ITGAEP38570 1179 aa16.5■□□□□ 0.23
LDHA-208ENST00000469976 FAM50AQ14320 339 aaKnown RBP16.5■□□□□ 0.23
LDHA-208ENST00000469976 PIAS4Q8N2W9 510 aaPredicted RBP16.5■□□□□ 0.23
LDHA-208ENST00000469976 CEP170Q5SW79 1584 aa16.49■□□□□ 0.23
LDHA-208ENST00000469976 PPP6R1Q9UPN7 881 aa16.48■□□□□ 0.23
LDHA-208ENST00000469976 TCOF1Q13428 1488 aaKnown RBP16.48■□□□□ 0.23
LDHA-208ENST00000469976 GCC2Q8IWJ2 1684 aa16.46■□□□□ 0.23
LDHA-208ENST00000469976 CDK13Q14004 1512 aaKnown RBP16.44■□□□□ 0.22
LDHA-208ENST00000469976 NUP160Q12769 1436 aa16.44■□□□□ 0.22
LDHA-208ENST00000469976 ADRA2BP18089 450 aa16.43■□□□□ 0.22
LDHA-208ENST00000469976 HFM1A2PYH4 1435 aa16.41■□□□□ 0.22
LDHA-208ENST00000469976 MIA2Q96PC5 1412 aa16.41■□□□□ 0.22
LDHA-208ENST00000469976 ADCY10Q96PN6 1610 aa16.39■□□□□ 0.21
LDHA-208ENST00000469976 POTEDQ86YR6 584 aa16.39■□□□□ 0.21
LDHA-208ENST00000469976 AKNAQ7Z591 1439 aa16.38■□□□□ 0.21
LDHA-208ENST00000469976 NUP153P49790 1475 aaKnown RBP16.38■□□□□ 0.21
LDHA-208ENST00000469976 ITSN2Q9NZM3 1697 aa16.37■□□□□ 0.21
LDHA-208ENST00000469976 PTPRKQ15262 1439 aa16.36■□□□□ 0.21
LDHA-208ENST00000469976 CHMP7Q8WUX9 453 aaPredicted RBP16.35■□□□□ 0.21
LDHA-208ENST00000469976 CARMIL2Q6F5E8 1435 aa16.35■□□□□ 0.21
LDHA-208ENST00000469976 TIMELESSQ9UNS1 1208 aa16.34■□□□□ 0.21
LDHA-208ENST00000469976 NAIPQ13075 1403 aa16.34■□□□□ 0.21
LDHA-208ENST00000469976 UACAQ9BZF9 1416 aa16.34■□□□□ 0.21
LDHA-208ENST00000469976 DNMT1P26358 1616 aaKnown RBP16.33■□□□□ 0.2
LDHA-208ENST00000469976 CHD1O14646 1710 aa16.32■□□□□ 0.2
LDHA-208ENST00000469976 ABCA8O94911 1581 aa16.3■□□□□ 0.2
LDHA-208ENST00000469976 ADGBQ8N7X0 1667 aa16.29■□□□□ 0.2
LDHA-208ENST00000469976 TROQ12816 1431 aaPredicted RBP16.28■□□□□ 0.2
LDHA-208ENST00000469976 CDK11AQ9UQ88 783 aaPredicted RBP16.27■□□□□ 0.2
LDHA-208ENST00000469976 CROCC2H7BZ55 1655 aa16.26■□□□□ 0.19
LDHA-208ENST00000469976 ACIN1Q9UKV3 1341 aaKnown RBP16.25■□□□□ 0.19
LDHA-208ENST00000469976 PLB1Q6P1J6 1458 aa16.24■□□□□ 0.19
LDHA-208ENST00000469976 SHROOM2Q13796 1616 aa16.24■□□□□ 0.19
LDHA-208ENST00000469976 JPH4Q96JJ6 628 aa16.24■□□□□ 0.19
LDHA-208ENST00000469976 CENPBP07199 599 aaPredicted RBP16.23■□□□□ 0.19
LDHA-208ENST00000469976 ROCK1Q13464 1354 aa16.23■□□□□ 0.19
LDHA-208ENST00000469976 KIF14Q15058 1648 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms