RNA–Protein interactions for RNA: ENST00000469896.1

COMMD2-202, Transcript of COMM domain containing 2, humanhuman

TSL 1 (best)

Gene COMMD2, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD2-202ENST00000469896 PBRM1Q86U86 1689 aa21.21■□□□□ 0.99
COMMD2-202ENST00000469896 PPP4R3CPQ6ZMV5 832 aa21.2■□□□□ 0.98
COMMD2-202ENST00000469896 ABCC10Q5T3U5 1492 aa21.2■□□□□ 0.98
COMMD2-202ENST00000469896 GRIN2AQ12879 1464 aa21.18■□□□□ 0.98
COMMD2-202ENST00000469896 NPM1P06748 294 aaKnown RBP eCLIP21.17■□□□□ 0.98
COMMD2-202ENST00000469896 KDM6BO15054 1643 aa21.17■□□□□ 0.98
COMMD2-202ENST00000469896 CUX1P39880 1505 aa21.14■□□□□ 0.98
COMMD2-202ENST00000469896 NUP160Q12769 1436 aa21.14■□□□□ 0.98
COMMD2-202ENST00000469896 SHROOM2Q13796 1616 aa21.1■□□□□ 0.97
COMMD2-202ENST00000469896 MAPKBP1O60336 1514 aa21.08■□□□□ 0.96
COMMD2-202ENST00000469896 ABCA5Q8WWZ7 1642 aa21.07■□□□□ 0.96
COMMD2-202ENST00000469896 ABCA10Q8WWZ4 1543 aa21.07■□□□□ 0.96
COMMD2-202ENST00000469896 DIP2BQ9P265 1576 aa21.06■□□□□ 0.96
COMMD2-202ENST00000469896 PRG4Q92954 1404 aaPredicted RBP21.04■□□□□ 0.96
COMMD2-202ENST00000469896 ADAMTS12P58397 1594 aa21.01■□□□□ 0.95
COMMD2-202ENST00000469896 HECW2Q9P2P5 1572 aa21■□□□□ 0.95
COMMD2-202ENST00000469896 ADGRL1O94910 1474 aa21■□□□□ 0.95
COMMD2-202ENST00000469896 FBXO41Q8TF61 875 aa20.98■□□□□ 0.95
COMMD2-202ENST00000469896 FHAD1B1AJZ9 1412 aa20.97■□□□□ 0.95
COMMD2-202ENST00000469896 JPH4Q96JJ6 628 aa20.95■□□□□ 0.94
COMMD2-202ENST00000469896 TSPOAP1O95153 1857 aa20.9■□□□□ 0.94
COMMD2-202ENST00000469896 WRNQ14191 1432 aaPredicted RBP eCLIP20.86■□□□□ 0.93
COMMD2-202ENST00000469896 ADCY10Q96PN6 1610 aa20.86■□□□□ 0.93
COMMD2-202ENST00000469896 ERICH3Q5RHP9 1530 aa20.79■□□□□ 0.92
COMMD2-202ENST00000469896 CNKSR2Q8WXI2 1034 aa20.75■□□□□ 0.91
COMMD2-202ENST00000469896 RUSC2Q8N2Y8 1516 aa20.73■□□□□ 0.91
COMMD2-202ENST00000469896 LMTK3Q96Q04 1460 aa20.73■□□□□ 0.91
COMMD2-202ENST00000469896 HOXD11P31277 338 aaPredicted RBP20.69■□□□□ 0.9
COMMD2-202ENST00000469896 PLB1Q6P1J6 1458 aa20.66■□□□□ 0.9
COMMD2-202ENST00000469896 GLI2P10070 1586 aa20.66■□□□□ 0.9
COMMD2-202ENST00000469896 TOP2BQ02880 1626 aa20.65■□□□□ 0.9
COMMD2-202ENST00000469896 ASXL2Q76L83 1435 aa20.63■□□□□ 0.89
COMMD2-202ENST00000469896 COL17A1Q9UMD9 1497 aaPredicted RBP20.62■□□□□ 0.89
COMMD2-202ENST00000469896 PPRC1Q5VV67 1664 aaKnown RBP20.62■□□□□ 0.89
COMMD2-202ENST00000469896 TEX14Q8IWB6 1497 aa20.62■□□□□ 0.89
COMMD2-202ENST00000469896 PTPRGP23470 1445 aa20.61■□□□□ 0.89
COMMD2-202ENST00000469896 ABCC2Q92887 1545 aa20.61■□□□□ 0.89
COMMD2-202ENST00000469896 KIAA0586Q9BVV6 1533 aa20.58■□□□□ 0.89
COMMD2-202ENST00000469896 SOCS7O14512 581 aa20.54■□□□□ 0.88
COMMD2-202ENST00000469896 RNF216Q9NWF9 866 aaPredicted RBP20.54■□□□□ 0.88
COMMD2-202ENST00000469896 TTBK1Q5TCY1 1321 aaPredicted RBP20.53■□□□□ 0.88
COMMD2-202ENST00000469896 BIVM-ERCC5R4GMW8 1640 aa20.53■□□□□ 0.88
COMMD2-202ENST00000469896 TNIKQ9UKE5 1360 aa20.48■□□□□ 0.87
COMMD2-202ENST00000469896 EPRSP07814 1512 aaKnown RBP20.48■□□□□ 0.87
COMMD2-202ENST00000469896 CARMIL2Q6F5E8 1435 aa20.47■□□□□ 0.87
COMMD2-202ENST00000469896 MAP3K4Q9Y6R4 1608 aa20.47■□□□□ 0.87
COMMD2-202ENST00000469896 UHRF1BP1LA0JNW5 1464 aa20.44■□□□□ 0.86
COMMD2-202ENST00000469896 DISP3Q9P2K9 1392 aa20.43■□□□□ 0.86
COMMD2-202ENST00000469896 CUL7Q14999 1698 aa20.41■□□□□ 0.86
COMMD2-202ENST00000469896 UACAQ9BZF9 1416 aa20.4■□□□□ 0.86
COMMD2-202ENST00000469896 DCAF8L1A6NGE4 600 aa20.39■□□□□ 0.85
COMMD2-202ENST00000469896 ILDR2Q71H61 639 aa20.39■□□□□ 0.85
COMMD2-202ENST00000469896 KDM5BQ9UGL1 1544 aa20.35■□□□□ 0.85
COMMD2-202ENST00000469896 NCBP3Q53F19 620 aaKnown RBP20.34■□□□□ 0.85
COMMD2-202ENST00000469896 PTPRMP28827 1452 aa20.34■□□□□ 0.85
COMMD2-202ENST00000469896 KIF21BO75037 1637 aa20.31■□□□□ 0.84
COMMD2-202ENST00000469896 PCF11O94913 1555 aaKnown RBP20.3■□□□□ 0.84
COMMD2-202ENST00000469896 IGF1RP08069 1367 aa20.29■□□□□ 0.84
COMMD2-202ENST00000469896 CERKQ8TCT0 537 aa20.28■□□□□ 0.84
COMMD2-202ENST00000469896 WDR7Q9Y4E6 1490 aa20.28■□□□□ 0.84
COMMD2-202ENST00000469896 CD109Q6YHK3 1445 aa20.27■□□□□ 0.84
COMMD2-202ENST00000469896 MAGI3Q5TCQ9 1506 aa20.27■□□□□ 0.84
COMMD2-202ENST00000469896 ZCCHC11Q5TAX3 1644 aaKnown RBP20.25■□□□□ 0.83
COMMD2-202ENST00000469896 KIF27Q86VH2 1401 aa20.23■□□□□ 0.83
COMMD2-202ENST00000469896 IQGAP2Q13576 1575 aa20.21■□□□□ 0.83
COMMD2-202ENST00000469896 ADAMTSL3P82987 1691 aa20.2■□□□□ 0.82
COMMD2-202ENST00000469896 CFAP43Q8NDM7 1665 aa20.18■□□□□ 0.82
COMMD2-202ENST00000469896 DISP1Q96F81 1524 aa20.17■□□□□ 0.82
COMMD2-202ENST00000469896 KCNH8Q96L42 1107 aa20.16■□□□□ 0.82
COMMD2-202ENST00000469896 CARMIL1Q5VZK9 1371 aa20.16■□□□□ 0.82
COMMD2-202ENST00000469896 NPM3O75607 178 aaKnown RBP20.15■□□□□ 0.82
COMMD2-202ENST00000469896 ARAP3Q8WWN8 1544 aa20.15■□□□□ 0.82
COMMD2-202ENST00000469896 ARID4BQ4LE39 1312 aaPredicted RBP20.14■□□□□ 0.81
COMMD2-202ENST00000469896 SPATA31D1Q6ZQQ2 1576 aa20.12■□□□□ 0.81
COMMD2-202ENST00000469896 HSPA2P54652 639 aa20.12■□□□□ 0.81
COMMD2-202ENST00000469896 MADDQ8WXG6 1647 aa20.08■□□□□ 0.8
COMMD2-202ENST00000469896 PHLDB1Q86UU1 1377 aa20.08■□□□□ 0.8
COMMD2-202ENST00000469896 BCORL1Q5H9F3 1711 aa20.06■□□□□ 0.8
COMMD2-202ENST00000469896 UGGT2Q9NYU1 1516 aa20.05■□□□□ 0.8
COMMD2-202ENST00000469896 SUPT5HO00267 1087 aaKnown RBP20.03■□□□□ 0.8
COMMD2-202ENST00000469896 RNF39Q9H2S5 420 aa20.03■□□□□ 0.8
COMMD2-202ENST00000469896 KIAA0556O60303 1618 aa20.02■□□□□ 0.8
COMMD2-202ENST00000469896 RAPGEF3O95398 923 aa20■□□□□ 0.79
COMMD2-202ENST00000469896 RIMS1Q86UR5 1692 aaKnown RBP19.97■□□□□ 0.79
COMMD2-202ENST00000469896 CACNB1Q02641 598 aaPredicted RBP19.95■□□□□ 0.78
COMMD2-202ENST00000469896 POGZQ7Z3K3 1410 aa19.93■□□□□ 0.78
COMMD2-202ENST00000469896 NEO1Q92859 1461 aa19.92■□□□□ 0.78
COMMD2-202ENST00000469896 ABCA8O94911 1581 aa19.89■□□□□ 0.77
COMMD2-202ENST00000469896 KCNA4P22459 653 aa19.89■□□□□ 0.77
COMMD2-202ENST00000469896 FAM9AQ8IZU1 332 aaPredicted RBP19.89■□□□□ 0.77
COMMD2-202ENST00000469896 GOLGA3Q08378 1498 aa19.88■□□□□ 0.77
COMMD2-202ENST00000469896 ARHGEF40Q8TER5 1519 aa19.86■□□□□ 0.77
COMMD2-202ENST00000469896 RAPGEF2Q9Y4G8 1499 aa19.86■□□□□ 0.77
COMMD2-202ENST00000469896 YEATS2Q9ULM3 1422 aa19.86■□□□□ 0.77
COMMD2-202ENST00000469896 FANCAO15360 1455 aa19.86■□□□□ 0.77
COMMD2-202ENST00000469896 ABCA9Q8IUA7 1624 aa19.84■□□□□ 0.77
COMMD2-202ENST00000469896 FRMPD1Q5SYB0 1578 aa19.83■□□□□ 0.77
COMMD2-202ENST00000469896 AKNAQ7Z591 1439 aa19.81■□□□□ 0.76
COMMD2-202ENST00000469896 ARID3CA6NKF2 412 aa19.79■□□□□ 0.76
COMMD2-202ENST00000469896 DENND4BO75064 1496 aaPredicted RBP19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms