RNA–Protein interactions for RNA: ENST00000469334.5

SMARCE1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,128 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-207ENST00000469334 CCDC136Q96JN2 1154 aa12.44□□□□□ -0.42
SMARCE1-207ENST00000469334 WASHC2AQ641Q2 1341 aa12.42□□□□□ -0.42
SMARCE1-207ENST00000469334 SYNJ1O43426 1573 aa12.42□□□□□ -0.42
SMARCE1-207ENST00000469334 IL27Q8NEV9 243 aa12.42□□□□□ -0.42
SMARCE1-207ENST00000469334 ANP32AP39687 249 aaKnown RBP12.41□□□□□ -0.42
SMARCE1-207ENST00000469334 IPO9Q96P70 1041 aaKnown RBP12.41□□□□□ -0.42
SMARCE1-207ENST00000469334 USP35Q9P2H5 1018 aa12.41□□□□□ -0.42
SMARCE1-207ENST00000469334 PAK3O75914 559 aaPredicted RBP12.4□□□□□ -0.42
SMARCE1-207ENST00000469334 CCNB3Q8WWL7 1395 aa12.39□□□□□ -0.43
SMARCE1-207ENST00000469334 ERICH3Q5RHP9 1530 aa12.37□□□□□ -0.43
SMARCE1-207ENST00000469334 WASHC2CQ9Y4E1 1318 aa12.37□□□□□ -0.43
SMARCE1-207ENST00000469334 ZBTB47Q9UFB7 747 aaPredicted RBP12.36□□□□□ -0.43
SMARCE1-207ENST00000469334 SMARCA4P51532 1647 aa12.36□□□□□ -0.43
SMARCE1-207ENST00000469334 RAB3GAP2Q9H2M9 1393 aa12.36□□□□□ -0.43
SMARCE1-207ENST00000469334 ARAP1Q96P48 1450 aa12.35□□□□□ -0.43
SMARCE1-207ENST00000469334 RAPGEF2Q9Y4G8 1499 aa12.35□□□□□ -0.43
SMARCE1-207ENST00000469334 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.35□□□□□ -0.43
SMARCE1-207ENST00000469334 SLC24A1O60721 1099 aa12.35□□□□□ -0.43
SMARCE1-207ENST00000469334 HNRNPUQ00839 825 aaKnown RBP eCLIP12.34□□□□□ -0.43
SMARCE1-207ENST00000469334 PEG3Q9GZU2 1588 aa12.33□□□□□ -0.44
SMARCE1-207ENST00000469334 IRX6P78412 446 aaPredicted RBP12.32□□□□□ -0.44
SMARCE1-207ENST00000469334 NCAPD3P42695 1498 aa12.32□□□□□ -0.44
SMARCE1-207ENST00000469334 SETD5Q9C0A6 1442 aa12.32□□□□□ -0.44
SMARCE1-207ENST00000469334 PKNOX2Q96KN3 472 aa12.31□□□□□ -0.44
SMARCE1-207ENST00000469334 RTN4Q9NQC3 1192 aaKnown RBP12.31□□□□□ -0.44
SMARCE1-207ENST00000469334 EIF5BO60841 1220 aaKnown RBP12.29□□□□□ -0.44
SMARCE1-207ENST00000469334 RSPH6AQ9H0K4 717 aa12.28□□□□□ -0.44
SMARCE1-207ENST00000469334 MAP3K1Q13233 1512 aa12.28□□□□□ -0.44
SMARCE1-207ENST00000469334 B4GALNT3Q6L9W6 998 aa12.27□□□□□ -0.45
SMARCE1-207ENST00000469334 PPM1GO15355 546 aaPredicted RBP12.26□□□□□ -0.45
SMARCE1-207ENST00000469334 KANK4Q5T7N3 995 aaPredicted RBP12.25□□□□□ -0.45
SMARCE1-207ENST00000469334 ZBED9Q6R2W3 1325 aa12.25□□□□□ -0.45
SMARCE1-207ENST00000469334 GLIPR1L2Q4G1C9 344 aa12.24□□□□□ -0.45
SMARCE1-207ENST00000469334 FHAD1B1AJZ9 1412 aa12.23□□□□□ -0.45
SMARCE1-207ENST00000469334 NEFMP07197 916 aa12.21□□□□□ -0.45
SMARCE1-207ENST00000469334 NCOA2Q15596 1464 aa12.21□□□□□ -0.45
SMARCE1-207ENST00000469334 PRXQ9BXM0 1461 aa12.2□□□□□ -0.46
SMARCE1-207ENST00000469334 TIAM1Q13009 1591 aa12.19□□□□□ -0.46
SMARCE1-207ENST00000469334 SMG6Q86US8 1419 aaKnown RBP12.19□□□□□ -0.46
SMARCE1-207ENST00000469334 TOP2BQ02880 1626 aa12.18□□□□□ -0.46
SMARCE1-207ENST00000469334 RNF123Q5XPI4 1314 aa12.18□□□□□ -0.46
SMARCE1-207ENST00000469334 FAM43AQ8N2R8 423 aa12.17□□□□□ -0.46
SMARCE1-207ENST00000469334 SIN3AQ96ST3 1273 aa12.17□□□□□ -0.46
SMARCE1-207ENST00000469334 GSE1Q14687 1217 aa12.17□□□□□ -0.46
SMARCE1-207ENST00000469334 BIVM-ERCC5R4GMW8 1640 aa12.16□□□□□ -0.46
SMARCE1-207ENST00000469334 CNTLNQ9NXG0 1405 aa12.16□□□□□ -0.46
SMARCE1-207ENST00000469334 TONSLQ96HA7 1378 aa12.16□□□□□ -0.46
SMARCE1-207ENST00000469334 CFAP43Q8NDM7 1665 aa12.14□□□□□ -0.47
SMARCE1-207ENST00000469334 POLR1AO95602 1720 aaPredicted RBP12.14□□□□□ -0.47
SMARCE1-207ENST00000469334 BRPF3Q9ULD4 1205 aa12.14□□□□□ -0.47
SMARCE1-207ENST00000469334 TCERG1O14776 1098 aaKnown RBP12.12□□□□□ -0.47
SMARCE1-207ENST00000469334 ABCA5Q8WWZ7 1642 aa12.12□□□□□ -0.47
SMARCE1-207ENST00000469334 DDRGK1Q96HY6 314 aa12.11□□□□□ -0.47
SMARCE1-207ENST00000469334 HIRIP3Q9BW71 556 aaPredicted RBP12.11□□□□□ -0.47
SMARCE1-207ENST00000469334 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.11□□□□□ -0.47
SMARCE1-207ENST00000469334 ARHGAP35Q9NRY4 1499 aa12.11□□□□□ -0.47
SMARCE1-207ENST00000469334 DNAJC5Q9H3Z4 198 aa12.1□□□□□ -0.47
SMARCE1-207ENST00000469334 MS4A1P11836 297 aa12.1□□□□□ -0.47
SMARCE1-207ENST00000469334 LAS1LQ9Y4W2 734 aaKnown RBP12.1□□□□□ -0.47
SMARCE1-207ENST00000469334 KDM5BQ9UGL1 1544 aa12.09□□□□□ -0.47
SMARCE1-207ENST00000469334 LRRC9Q6ZRR7 1453 aa12.08□□□□□ -0.47
SMARCE1-207ENST00000469334 NUDCQ9Y266 331 aa12.07□□□□□ -0.48
SMARCE1-207ENST00000469334 AKNAQ7Z591 1439 aa12.06□□□□□ -0.48
SMARCE1-207ENST00000469334 RANGAP1P46060 587 aaPredicted RBP12.05□□□□□ -0.48
SMARCE1-207ENST00000469334 UACAQ9BZF9 1416 aa12.05□□□□□ -0.48
SMARCE1-207ENST00000469334 PRKRIP1Q9H875 184 aaPredicted RBP12.04□□□□□ -0.48
SMARCE1-207ENST00000469334 MRS2Q9HD23 443 aa12.04□□□□□ -0.48
SMARCE1-207ENST00000469334 BACH2Q9BYV9 841 aa12.03□□□□□ -0.48
SMARCE1-207ENST00000469334 PDE4AP27815 886 aa12.02□□□□□ -0.48
SMARCE1-207ENST00000469334 FRAT1Q92837 279 aaPredicted RBP12.02□□□□□ -0.48
SMARCE1-207ENST00000469334 PHLDB1Q86UU1 1377 aa12.02□□□□□ -0.48
SMARCE1-207ENST00000469334 NFKBIBQ15653 356 aa12.02□□□□□ -0.49
SMARCE1-207ENST00000469334 NCOA1Q15788 1441 aa12.01□□□□□ -0.49
SMARCE1-207ENST00000469334 NPM2Q86SE8 214 aaKnown RBP12.01□□□□□ -0.49
SMARCE1-207ENST00000469334 FAM9BQ8IZU0 186 aa12.01□□□□□ -0.49
SMARCE1-207ENST00000469334 CCDC18Q5T9S5 1454 aa12.01□□□□□ -0.49
SMARCE1-207ENST00000469334 ZMYND15Q9H091 742 aa12.01□□□□□ -0.49
SMARCE1-207ENST00000469334 PTPN23Q9H3S7 1636 aa12□□□□□ -0.49
SMARCE1-207ENST00000469334 CCDC184Q52MB2 194 aa11.99□□□□□ -0.49
SMARCE1-207ENST00000469334 RRP9O43818 475 aaKnown RBP11.99□□□□□ -0.49
SMARCE1-207ENST00000469334 DAXXQ9UER7 740 aaPredicted RBP11.99□□□□□ -0.49
SMARCE1-207ENST00000469334 CCDC7Q96M83 1385 aa11.98□□□□□ -0.49
SMARCE1-207ENST00000469334 HSPA5P11021 654 aaKnown RBP11.98□□□□□ -0.49
SMARCE1-207ENST00000469334 VSIG10Q8N0Z9 540 aa11.98□□□□□ -0.49
SMARCE1-207ENST00000469334 PODXL2Q9NZ53 605 aa11.98□□□□□ -0.49
SMARCE1-207ENST00000469334 HFM1A2PYH4 1435 aa11.97□□□□□ -0.49
SMARCE1-207ENST00000469334 EIF4G2P78344 907 aaKnown RBP eCLIP11.97□□□□□ -0.49
SMARCE1-207ENST00000469334 HECW1Q76N89 1606 aa11.96□□□□□ -0.49
SMARCE1-207ENST00000469334 UNC13AQ9UPW8 1703 aa11.96□□□□□ -0.5
SMARCE1-207ENST00000469334 KIF27Q86VH2 1401 aa11.96□□□□□ -0.5
SMARCE1-207ENST00000469334 FAM50AQ14320 339 aaKnown RBP11.95□□□□□ -0.5
SMARCE1-207ENST00000469334 PCF11O94913 1555 aaKnown RBP11.92□□□□□ -0.5
SMARCE1-207ENST00000469334 HSP90AA2PQ14568 343 aaPredicted RBP11.92□□□□□ -0.5
SMARCE1-207ENST00000469334 L1TD1Q5T7N2 865 aaKnown RBP11.91□□□□□ -0.5
SMARCE1-207ENST00000469334 RRP1P56182 461 aaKnown RBP11.9□□□□□ -0.5
SMARCE1-207ENST00000469334 GCC2Q8IWJ2 1684 aa11.9□□□□□ -0.5
SMARCE1-207ENST00000469334 HSP90AA1P07900 732 aaKnown RBP11.89□□□□□ -0.51
SMARCE1-207ENST00000469334 FMN1Q68DA7 1419 aa11.89□□□□□ -0.51
SMARCE1-207ENST00000469334 FYCO1Q9BQS8 1478 aa11.89□□□□□ -0.51
SMARCE1-207ENST00000469334 DCAF11Q8TEB1 546 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 134.3 ms