RNA–Protein interactions for RNA: ENST00000469187.5

TRIM6-206, Transcript of tripartite motif containing 6, humanhuman

TSL 2

Gene TRIM6, Length 1,050 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-206ENST00000469187 JPH4Q96JJ6 628 aa17.12■□□□□ 0.33
TRIM6-206ENST00000469187 KIAA0586Q9BVV6 1533 aa17.08■□□□□ 0.32
TRIM6-206ENST00000469187 NUP160Q12769 1436 aa17.07■□□□□ 0.32
TRIM6-206ENST00000469187 CHD1O14646 1710 aa17.06■□□□□ 0.32
TRIM6-206ENST00000469187 P3H3Q8IVL6 736 aa17.04■□□□□ 0.32
TRIM6-206ENST00000469187 CEP170Q5SW79 1584 aa17.02■□□□□ 0.31
TRIM6-206ENST00000469187 CLIP1P30622 1438 aa16.99■□□□□ 0.31
TRIM6-206ENST00000469187 CEP162Q5TB80 1403 aa16.99■□□□□ 0.31
TRIM6-206ENST00000469187 IQGAP2Q13576 1575 aa16.98■□□□□ 0.31
TRIM6-206ENST00000469187 TTBK1Q5TCY1 1321 aaPredicted RBP16.96■□□□□ 0.31
TRIM6-206ENST00000469187 CARMIL2Q6F5E8 1435 aa16.96■□□□□ 0.31
TRIM6-206ENST00000469187 CTTNBP2Q8WZ74 1663 aa16.95■□□□□ 0.3
TRIM6-206ENST00000469187 PRG4Q92954 1404 aaPredicted RBP16.94■□□□□ 0.3
TRIM6-206ENST00000469187 UGGT2Q9NYU1 1516 aa16.91■□□□□ 0.3
TRIM6-206ENST00000469187 ATP1B4Q9UN42 357 aaPredicted RBP16.9■□□□□ 0.3
TRIM6-206ENST00000469187 CLASP1Q7Z460 1538 aa16.89■□□□□ 0.29
TRIM6-206ENST00000469187 ARHGAP35Q9NRY4 1499 aa16.87■□□□□ 0.29
TRIM6-206ENST00000469187 EFCAB5A4FU69 1503 aa16.86■□□□□ 0.29
TRIM6-206ENST00000469187 APLP2Q06481 763 aa16.85■□□□□ 0.29
TRIM6-206ENST00000469187 PTPRGP23470 1445 aa16.85■□□□□ 0.29
TRIM6-206ENST00000469187 FHOD3Q2V2M9 1422 aa16.84■□□□□ 0.29
TRIM6-206ENST00000469187 DISP1Q96F81 1524 aa16.83■□□□□ 0.28
TRIM6-206ENST00000469187 FMN1Q68DA7 1419 aa16.8■□□□□ 0.28
TRIM6-206ENST00000469187 SHROOM2Q13796 1616 aa16.8■□□□□ 0.28
TRIM6-206ENST00000469187 ARAP1Q96P48 1450 aa16.8■□□□□ 0.28
TRIM6-206ENST00000469187 KIAA0556O60303 1618 aa16.78■□□□□ 0.28
TRIM6-206ENST00000469187 SAMD9Q5K651 1589 aa16.77■□□□□ 0.28
TRIM6-206ENST00000469187 CYB5RLQ6IPT4 315 aa16.77■□□□□ 0.28
TRIM6-206ENST00000469187 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.76■□□□□ 0.27
TRIM6-206ENST00000469187 HNRNPUL2Q1KMD3 747 aaKnown RBP16.76■□□□□ 0.27
TRIM6-206ENST00000469187 DNAJC5Q9H3Z4 198 aa16.75■□□□□ 0.27
TRIM6-206ENST00000469187 VPS8Q8N3P4 1428 aa16.75■□□□□ 0.27
TRIM6-206ENST00000469187 ERCC6L2Q5T890 1561 aa16.73■□□□□ 0.27
TRIM6-206ENST00000469187 NPM1P06748 294 aaKnown RBP eCLIP16.73■□□□□ 0.27
TRIM6-206ENST00000469187 ARID3CA6NKF2 412 aa16.71■□□□□ 0.27
TRIM6-206ENST00000469187 ARHGEF11O15085 1522 aa16.7■□□□□ 0.26
TRIM6-206ENST00000469187 UACAQ9BZF9 1416 aa16.69■□□□□ 0.26
TRIM6-206ENST00000469187 CDK11AQ9UQ88 783 aaPredicted RBP16.68■□□□□ 0.26
TRIM6-206ENST00000469187 CASKIN1Q8WXD9 1431 aa16.68■□□□□ 0.26
TRIM6-206ENST00000469187 PLB1Q6P1J6 1458 aa16.66■□□□□ 0.26
TRIM6-206ENST00000469187 PLEKHD1A6NEE1 506 aa16.64■□□□□ 0.25
TRIM6-206ENST00000469187 PPARGC1BQ86YN6 1023 aaKnown RBP16.63■□□□□ 0.25
TRIM6-206ENST00000469187 RIMBP3CA6NJZ7 1639 aa16.62■□□□□ 0.25
TRIM6-206ENST00000469187 RIMBP3BA6NNM3 1639 aa16.62■□□□□ 0.25
TRIM6-206ENST00000469187 RIMBP3Q9UFD9 1639 aa16.62■□□□□ 0.25
TRIM6-206ENST00000469187 FYCO1Q9BQS8 1478 aa16.61■□□□□ 0.25
TRIM6-206ENST00000469187 RAPGEF6Q8TEU7 1601 aa16.59■□□□□ 0.25
TRIM6-206ENST00000469187 ABCA8O94911 1581 aa16.59■□□□□ 0.25
TRIM6-206ENST00000469187 UHRF1BP1LA0JNW5 1464 aa16.57■□□□□ 0.24
TRIM6-206ENST00000469187 KANK4Q5T7N3 995 aaPredicted RBP16.56■□□□□ 0.24
TRIM6-206ENST00000469187 HECW1Q76N89 1606 aa16.56■□□□□ 0.24
TRIM6-206ENST00000469187 PCF11O94913 1555 aaKnown RBP16.55■□□□□ 0.24
TRIM6-206ENST00000469187 EPRSP07814 1512 aaKnown RBP16.55■□□□□ 0.24
TRIM6-206ENST00000469187 ABCC2Q92887 1545 aa16.55■□□□□ 0.24
TRIM6-206ENST00000469187 ATP10BO94823 1461 aa16.55■□□□□ 0.24
TRIM6-206ENST00000469187 NUP153P49790 1475 aaKnown RBP16.55■□□□□ 0.24
TRIM6-206ENST00000469187 CCDC18Q5T9S5 1454 aa16.54■□□□□ 0.24
TRIM6-206ENST00000469187 MTUS2Q5JR59 1369 aa16.54■□□□□ 0.24
TRIM6-206ENST00000469187 KCNH8Q96L42 1107 aa16.54■□□□□ 0.24
TRIM6-206ENST00000469187 MAP3K1Q13233 1512 aa16.51■□□□□ 0.23
TRIM6-206ENST00000469187 CDK13Q14004 1512 aaKnown RBP16.49■□□□□ 0.23
TRIM6-206ENST00000469187 KDM5BQ9UGL1 1544 aa16.49■□□□□ 0.23
TRIM6-206ENST00000469187 ADCY10Q96PN6 1610 aa16.46■□□□□ 0.23
TRIM6-206ENST00000469187 TIAM1Q13009 1591 aa16.46■□□□□ 0.23
TRIM6-206ENST00000469187 LRRC9Q6ZRR7 1453 aa16.45■□□□□ 0.22
TRIM6-206ENST00000469187 TROQ12816 1431 aaPredicted RBP16.43■□□□□ 0.22
TRIM6-206ENST00000469187 ASXL2Q76L83 1435 aa16.41■□□□□ 0.22
TRIM6-206ENST00000469187 ZCCHC11Q5TAX3 1644 aaKnown RBP16.4■□□□□ 0.22
TRIM6-206ENST00000469187 LRRIQ1Q96JM4 1722 aa16.39■□□□□ 0.21
TRIM6-206ENST00000469187 FAM69CQ0P6D2 419 aa16.37■□□□□ 0.21
TRIM6-206ENST00000469187 CCNB3Q8WWL7 1395 aa16.37■□□□□ 0.21
TRIM6-206ENST00000469187 CFAP43Q8NDM7 1665 aa16.36■□□□□ 0.21
TRIM6-206ENST00000469187 WDR7Q9Y4E6 1490 aa16.35■□□□□ 0.21
TRIM6-206ENST00000469187 EHBP1L1Q8N3D4 1523 aa16.35■□□□□ 0.21
TRIM6-206ENST00000469187 CFDP1Q9UEE9 299 aaPredicted RBP16.35■□□□□ 0.21
TRIM6-206ENST00000469187 MAGI3Q5TCQ9 1506 aa16.34■□□□□ 0.21
TRIM6-206ENST00000469187 TRHP20396 242 aaPredicted RBP16.33■□□□□ 0.2
TRIM6-206ENST00000469187 ZNF777Q9ULD5 760 aaPredicted RBP16.33■□□□□ 0.2
TRIM6-206ENST00000469187 NCOA2Q15596 1464 aa16.33■□□□□ 0.2
TRIM6-206ENST00000469187 TRIM26Q12899 539 aaPredicted RBP16.32■□□□□ 0.2
TRIM6-206ENST00000469187 FAM50AQ14320 339 aaKnown RBP16.31■□□□□ 0.2
TRIM6-206ENST00000469187 EFCAB2Q5VUJ9 269 aa16.3■□□□□ 0.2
TRIM6-206ENST00000469187 SUPT6HQ7KZ85 1726 aaKnown RBP16.3■□□□□ 0.2
TRIM6-206ENST00000469187 MAPKBP1O60336 1514 aa16.29■□□□□ 0.2
TRIM6-206ENST00000469187 PHLDB1Q86UU1 1377 aa16.28■□□□□ 0.2
TRIM6-206ENST00000469187 KIF14Q15058 1648 aa16.27■□□□□ 0.2
TRIM6-206ENST00000469187 MYOM3Q5VTT5 1437 aa16.26■□□□□ 0.19
TRIM6-206ENST00000469187 CD109Q6YHK3 1445 aa16.26■□□□□ 0.19
TRIM6-206ENST00000469187 ABCC10Q5T3U5 1492 aa16.24■□□□□ 0.19
TRIM6-206ENST00000469187 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.24■□□□□ 0.19
TRIM6-206ENST00000469187 GPATCH8Q9UKJ3 1502 aaKnown RBP16.24■□□□□ 0.19
TRIM6-206ENST00000469187 PLCH2O75038 1416 aa16.23■□□□□ 0.19
TRIM6-206ENST00000469187 MIA2Q96PC5 1412 aa16.22■□□□□ 0.19
TRIM6-206ENST00000469187 ITGAEP38570 1179 aa16.22■□□□□ 0.19
TRIM6-206ENST00000469187 ZNF644Q9H582 1327 aaPredicted RBP16.2■□□□□ 0.18
TRIM6-206ENST00000469187 RSPH4AQ5TD94 716 aa16.2■□□□□ 0.18
TRIM6-206ENST00000469187 PCGF6Q9BYE7 350 aa16.2■□□□□ 0.18
TRIM6-206ENST00000469187 FGD6Q6ZV73 1430 aa16.19■□□□□ 0.18
TRIM6-206ENST00000469187 HNRNPMP52272 730 aaKnown RBP eCLIP16.19■□□□□ 0.18
TRIM6-206ENST00000469187 TSPY4P0CV99 314 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms