RNA–Protein interactions for RNA: ENST00000469093.1

COL5A1-207, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 670 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-207ENST00000469093 KIF27Q86VH2 1401 aa21.5■■□□□ 1.03
COL5A1-207ENST00000469093 RUSC2Q8N2Y8 1516 aa21.5■■□□□ 1.03
COL5A1-207ENST00000469093 NPM1P06748 294 aaKnown RBP eCLIP21.49■■□□□ 1.03
COL5A1-207ENST00000469093 KIAA0586Q9BVV6 1533 aa21.47■■□□□ 1.03
COL5A1-207ENST00000469093 FAM69CQ0P6D2 419 aa21.46■■□□□ 1.03
COL5A1-207ENST00000469093 KIF13AQ9H1H9 1805 aa21.43■■□□□ 1.02
COL5A1-207ENST00000469093 ABCC10Q5T3U5 1492 aa21.41■■□□□ 1.02
COL5A1-207ENST00000469093 CARMIL1Q5VZK9 1371 aa21.4■■□□□ 1.02
COL5A1-207ENST00000469093 MAPKBP1O60336 1514 aa21.36■■□□□ 1.01
COL5A1-207ENST00000469093 CUL7Q14999 1698 aa21.36■■□□□ 1.01
COL5A1-207ENST00000469093 ADCY10Q96PN6 1610 aa21.36■■□□□ 1.01
COL5A1-207ENST00000469093 PTPRGP23470 1445 aa21.33■■□□□ 1.01
COL5A1-207ENST00000469093 TTBK1Q5TCY1 1321 aaPredicted RBP21.3■■□□□ 1
COL5A1-207ENST00000469093 DIP2BQ9P265 1576 aa21.28■■□□□ 1
COL5A1-207ENST00000469093 TNIKQ9UKE5 1360 aa21.26■□□□□ 0.99
COL5A1-207ENST00000469093 CARMIL2Q6F5E8 1435 aa21.25■□□□□ 0.99
COL5A1-207ENST00000469093 ABCC2Q92887 1545 aa21.18■□□□□ 0.98
COL5A1-207ENST00000469093 IQGAP2Q13576 1575 aa21.18■□□□□ 0.98
COL5A1-207ENST00000469093 DISP1Q96F81 1524 aa21.15■□□□□ 0.98
COL5A1-207ENST00000469093 ASXL2Q76L83 1435 aa21.15■□□□□ 0.98
COL5A1-207ENST00000469093 RAPGEF2Q9Y4G8 1499 aa21.14■□□□□ 0.98
COL5A1-207ENST00000469093 UACAQ9BZF9 1416 aa21.14■□□□□ 0.98
COL5A1-207ENST00000469093 UHRF1BP1LA0JNW5 1464 aa21.13■□□□□ 0.97
COL5A1-207ENST00000469093 TSPOAP1O95153 1857 aa21.13■□□□□ 0.97
COL5A1-207ENST00000469093 KDM6BO15054 1643 aa21.12■□□□□ 0.97
COL5A1-207ENST00000469093 KDM4FA0A1W2PPD8 638 aa21.12■□□□□ 0.97
COL5A1-207ENST00000469093 PLB1Q6P1J6 1458 aa21.12■□□□□ 0.97
COL5A1-207ENST00000469093 UGGT2Q9NYU1 1516 aa21.08■□□□□ 0.96
COL5A1-207ENST00000469093 GLI2P10070 1586 aa21.05■□□□□ 0.96
COL5A1-207ENST00000469093 KDM5BQ9UGL1 1544 aa21.04■□□□□ 0.96
COL5A1-207ENST00000469093 EPRSP07814 1512 aaKnown RBP20.99■□□□□ 0.95
COL5A1-207ENST00000469093 KIAA0556O60303 1618 aa20.98■□□□□ 0.95
COL5A1-207ENST00000469093 PPRC1Q5VV67 1664 aaKnown RBP20.98■□□□□ 0.95
COL5A1-207ENST00000469093 COL17A1Q9UMD9 1497 aaPredicted RBP20.97■□□□□ 0.95
COL5A1-207ENST00000469093 ZCCHC11Q5TAX3 1644 aaKnown RBP20.93■□□□□ 0.94
COL5A1-207ENST00000469093 PRXQ9BXM0 1461 aa20.91■□□□□ 0.94
COL5A1-207ENST00000469093 MAP3K4Q9Y6R4 1608 aa20.9■□□□□ 0.94
COL5A1-207ENST00000469093 GOLGA3Q08378 1498 aa20.9■□□□□ 0.94
COL5A1-207ENST00000469093 WDR7Q9Y4E6 1490 aa20.89■□□□□ 0.94
COL5A1-207ENST00000469093 KCNH8Q96L42 1107 aa20.89■□□□□ 0.93
COL5A1-207ENST00000469093 TEX14Q8IWB6 1497 aa20.88■□□□□ 0.93
COL5A1-207ENST00000469093 CTTNBP2Q8WZ74 1663 aa20.84■□□□□ 0.93
COL5A1-207ENST00000469093 ABCA8O94911 1581 aa20.84■□□□□ 0.93
COL5A1-207ENST00000469093 CD109Q6YHK3 1445 aa20.82■□□□□ 0.92
COL5A1-207ENST00000469093 P3H3Q8IVL6 736 aa20.82■□□□□ 0.92
COL5A1-207ENST00000469093 ADGRL1O94910 1474 aa20.81■□□□□ 0.92
COL5A1-207ENST00000469093 CSRNP3Q8WYN3 585 aa20.79■□□□□ 0.92
COL5A1-207ENST00000469093 FAM9AQ8IZU1 332 aaPredicted RBP20.78■□□□□ 0.92
COL5A1-207ENST00000469093 MAGI3Q5TCQ9 1506 aa20.78■□□□□ 0.92
COL5A1-207ENST00000469093 ARID3CA6NKF2 412 aa20.77■□□□□ 0.92
COL5A1-207ENST00000469093 ATP10BO94823 1461 aa20.73■□□□□ 0.91
COL5A1-207ENST00000469093 CFAP43Q8NDM7 1665 aa20.7■□□□□ 0.91
COL5A1-207ENST00000469093 ARAP3Q8WWN8 1544 aa20.63■□□□□ 0.89
COL5A1-207ENST00000469093 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.62■□□□□ 0.89
COL5A1-207ENST00000469093 RANGAP1P46060 587 aaPredicted RBP20.62■□□□□ 0.89
COL5A1-207ENST00000469093 HNRNPUL2Q1KMD3 747 aaKnown RBP20.62■□□□□ 0.89
COL5A1-207ENST00000469093 PHLDB1Q86UU1 1377 aa20.6■□□□□ 0.89
COL5A1-207ENST00000469093 SAMD9Q5K651 1589 aa20.6■□□□□ 0.89
COL5A1-207ENST00000469093 ILDR1Q86SU0 546 aaPredicted RBP20.59■□□□□ 0.89
COL5A1-207ENST00000469093 RAPGEF3O95398 923 aa20.58■□□□□ 0.89
COL5A1-207ENST00000469093 EEA1Q15075 1411 aa20.57■□□□□ 0.88
COL5A1-207ENST00000469093 ABCA9Q8IUA7 1624 aa20.55■□□□□ 0.88
COL5A1-207ENST00000469093 RAPGEF6Q8TEU7 1601 aa20.55■□□□□ 0.88
COL5A1-207ENST00000469093 NUP153P49790 1475 aaKnown RBP20.54■□□□□ 0.88
COL5A1-207ENST00000469093 HECW2Q9P2P5 1572 aa20.54■□□□□ 0.88
COL5A1-207ENST00000469093 PLEKHD1A6NEE1 506 aa20.53■□□□□ 0.88
COL5A1-207ENST00000469093 FHOD3Q2V2M9 1422 aa20.53■□□□□ 0.88
COL5A1-207ENST00000469093 NEO1Q92859 1461 aa20.5■□□□□ 0.87
COL5A1-207ENST00000469093 KIF21BO75037 1637 aa20.5■□□□□ 0.87
COL5A1-207ENST00000469093 ARID4BQ4LE39 1312 aaPredicted RBP20.42■□□□□ 0.86
COL5A1-207ENST00000469093 PTPRMP28827 1452 aa20.4■□□□□ 0.86
COL5A1-207ENST00000469093 AKNAQ7Z591 1439 aa20.39■□□□□ 0.85
COL5A1-207ENST00000469093 FRMPD1Q5SYB0 1578 aa20.38■□□□□ 0.85
COL5A1-207ENST00000469093 DENND4BO75064 1496 aaPredicted RBP20.38■□□□□ 0.85
COL5A1-207ENST00000469093 EHMT2Q96KQ7 1210 aa20.38■□□□□ 0.85
COL5A1-207ENST00000469093 ADAMTSL3P82987 1691 aa20.38■□□□□ 0.85
COL5A1-207ENST00000469093 EFCAB5A4FU69 1503 aa20.37■□□□□ 0.85
COL5A1-207ENST00000469093 UBTFP17480 764 aaKnown RBP20.37■□□□□ 0.85
COL5A1-207ENST00000469093 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.36■□□□□ 0.85
COL5A1-207ENST00000469093 FANCAO15360 1455 aa20.36■□□□□ 0.85
COL5A1-207ENST00000469093 ATP1B4Q9UN42 357 aaPredicted RBP20.32■□□□□ 0.84
COL5A1-207ENST00000469093 CDK13Q14004 1512 aaKnown RBP20.31■□□□□ 0.84
COL5A1-207ENST00000469093 BCORL1Q5H9F3 1711 aa20.3■□□□□ 0.84
COL5A1-207ENST00000469093 CHIC1Q5VXU3 224 aa20.3■□□□□ 0.84
COL5A1-207ENST00000469093 TTC37Q6PGP7 1564 aa20.29■□□□□ 0.84
COL5A1-207ENST00000469093 PLCH2O75038 1416 aa20.28■□□□□ 0.84
COL5A1-207ENST00000469093 RICTORQ6R327 1708 aa20.27■□□□□ 0.84
COL5A1-207ENST00000469093 MADDQ8WXG6 1647 aa20.26■□□□□ 0.83
COL5A1-207ENST00000469093 ARHGEF40Q8TER5 1519 aa20.26■□□□□ 0.83
COL5A1-207ENST00000469093 FMN1Q68DA7 1419 aa20.26■□□□□ 0.83
COL5A1-207ENST00000469093 SCAPERQ9BY12 1400 aa20.26■□□□□ 0.83
COL5A1-207ENST00000469093 YEATS2Q9ULM3 1422 aa20.26■□□□□ 0.83
COL5A1-207ENST00000469093 CDK11AQ9UQ88 783 aaPredicted RBP20.25■□□□□ 0.83
COL5A1-207ENST00000469093 ARHGAP35Q9NRY4 1499 aa20.24■□□□□ 0.83
COL5A1-207ENST00000469093 EFCAB2Q5VUJ9 269 aa20.24■□□□□ 0.83
COL5A1-207ENST00000469093 CFAP74Q9C0B2 1584 aa20.24■□□□□ 0.83
COL5A1-207ENST00000469093 MAGI2Q86UL8 1455 aa20.23■□□□□ 0.83
COL5A1-207ENST00000469093 ZMYM4Q5VZL5 1548 aa20.22■□□□□ 0.83
COL5A1-207ENST00000469093 POGZQ7Z3K3 1410 aa20.22■□□□□ 0.83
COL5A1-207ENST00000469093 MLECQ14165 292 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms