RNA–Protein interactions for RNA: ENST00000468844.1

RPL39-202, Transcript of ribosomal protein L39, humanhuman

TSL 1 (best)

Gene RPL39, Length 1,915 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39-202ENST00000468844 CEP170Q5SW79 1584 aa28.29■■■□□ 2.12
RPL39-202ENST00000468844 NUP160Q12769 1436 aa28.23■■■□□ 2.11
RPL39-202ENST00000468844 CEP162Q5TB80 1403 aa28.21■■■□□ 2.11
RPL39-202ENST00000468844 IQGAP2Q13576 1575 aa28.2■■■□□ 2.11
RPL39-202ENST00000468844 KIAA0586Q9BVV6 1533 aa28.16■■■□□ 2.1
RPL39-202ENST00000468844 CLIP1P30622 1438 aa28.11■■■□□ 2.09
RPL39-202ENST00000468844 RANGAP1P46060 587 aaPredicted RBP28.1■■■□□ 2.09
RPL39-202ENST00000468844 CLASP1Q7Z460 1538 aa28.05■■■□□ 2.08
RPL39-202ENST00000468844 SAMD9Q5K651 1589 aa28.05■■■□□ 2.08
RPL39-202ENST00000468844 ARHGAP35Q9NRY4 1499 aa28.04■■■□□ 2.08
RPL39-202ENST00000468844 UGGT2Q9NYU1 1516 aa28.03■■■□□ 2.08
RPL39-202ENST00000468844 EFCAB5A4FU69 1503 aa28.02■■■□□ 2.08
RPL39-202ENST00000468844 SHROOM2Q13796 1616 aa28■■■□□ 2.07
RPL39-202ENST00000468844 ARAP1Q96P48 1450 aa27.95■■■□□ 2.07
RPL39-202ENST00000468844 KIAA0556O60303 1618 aa27.94■■■□□ 2.06
RPL39-202ENST00000468844 DISP1Q96F81 1524 aa27.93■■■□□ 2.06
RPL39-202ENST00000468844 JPH4Q96JJ6 628 aa27.91■■■□□ 2.06
RPL39-202ENST00000468844 OSCARQ8IYS5 282 aa27.9■■■□□ 2.06
RPL39-202ENST00000468844 FHOD3Q2V2M9 1422 aa27.88■■■□□ 2.05
RPL39-202ENST00000468844 P3H3Q8IVL6 736 aa27.86■■■□□ 2.05
RPL39-202ENST00000468844 PRG4Q92954 1404 aaPredicted RBP27.82■■■□□ 2.04
RPL39-202ENST00000468844 ERCC6L2Q5T890 1561 aa27.81■■■□□ 2.04
RPL39-202ENST00000468844 VPS8Q8N3P4 1428 aa27.81■■■□□ 2.04
RPL39-202ENST00000468844 CARMIL2Q6F5E8 1435 aa27.79■■■□□ 2.04
RPL39-202ENST00000468844 FMN1Q68DA7 1419 aa27.71■■■□□ 2.03
RPL39-202ENST00000468844 PCF11O94913 1555 aaKnown RBP27.71■■■□□ 2.03
RPL39-202ENST00000468844 LRRIQ1Q96JM4 1722 aa27.65■■■□□ 2.02
RPL39-202ENST00000468844 TTBK1Q5TCY1 1321 aaPredicted RBP27.61■■■□□ 2.01
RPL39-202ENST00000468844 FYCO1Q9BQS8 1478 aa27.61■■■□□ 2.01
RPL39-202ENST00000468844 CASKIN1Q8WXD9 1431 aa27.6■■■□□ 2.01
RPL39-202ENST00000468844 RAPGEF6Q8TEU7 1601 aa27.6■■■□□ 2.01
RPL39-202ENST00000468844 PTPRGP23470 1445 aa27.56■■■□□ 2
RPL39-202ENST00000468844 ARHGEF11O15085 1522 aa27.56■■■□□ 2
RPL39-202ENST00000468844 HECW1Q76N89 1606 aa27.56■■■□□ 2
RPL39-202ENST00000468844 PLB1Q6P1J6 1458 aa27.55■■■□□ 2
RPL39-202ENST00000468844 ABCA8O94911 1581 aa27.54■■■□□ 2
RPL39-202ENST00000468844 CFAP43Q8NDM7 1665 aa27.52■■■□□ 2
RPL39-202ENST00000468844 RIMBP3CA6NJZ7 1639 aa27.51■■□□□ 1.99
RPL39-202ENST00000468844 RIMBP3BA6NNM3 1639 aa27.51■■□□□ 1.99
RPL39-202ENST00000468844 RIMBP3Q9UFD9 1639 aa27.51■■□□□ 1.99
RPL39-202ENST00000468844 TIAM1Q13009 1591 aa27.47■■□□□ 1.99
RPL39-202ENST00000468844 NUP153P49790 1475 aaKnown RBP27.47■■□□□ 1.99
RPL39-202ENST00000468844 ATP1B4Q9UN42 357 aaPredicted RBP27.46■■□□□ 1.99
RPL39-202ENST00000468844 EPRSP07814 1512 aaKnown RBP27.43■■□□□ 1.98
RPL39-202ENST00000468844 MAP3K1Q13233 1512 aa27.43■■□□□ 1.98
RPL39-202ENST00000468844 UACAQ9BZF9 1416 aa27.43■■□□□ 1.98
RPL39-202ENST00000468844 ABCC2Q92887 1545 aa27.42■■□□□ 1.98
RPL39-202ENST00000468844 CCDC18Q5T9S5 1454 aa27.4■■□□□ 1.98
RPL39-202ENST00000468844 CDK13Q14004 1512 aaKnown RBP27.4■■□□□ 1.98
RPL39-202ENST00000468844 APLP2Q06481 763 aa27.39■■□□□ 1.98
RPL39-202ENST00000468844 ADCY10Q96PN6 1610 aa27.38■■□□□ 1.97
RPL39-202ENST00000468844 UHRF1BP1LA0JNW5 1464 aa27.35■■□□□ 1.97
RPL39-202ENST00000468844 PPARGC1BQ86YN6 1023 aaKnown RBP27.34■■□□□ 1.97
RPL39-202ENST00000468844 ARID3CA6NKF2 412 aa27.33■■□□□ 1.97
RPL39-202ENST00000468844 LRRC9Q6ZRR7 1453 aa27.3■■□□□ 1.96
RPL39-202ENST00000468844 KANK4Q5T7N3 995 aaPredicted RBP27.29■■□□□ 1.96
RPL39-202ENST00000468844 ZCCHC11Q5TAX3 1644 aaKnown RBP27.29■■□□□ 1.96
RPL39-202ENST00000468844 ATP10BO94823 1461 aa27.29■■□□□ 1.96
RPL39-202ENST00000468844 MAGI3Q5TCQ9 1506 aa27.29■■□□□ 1.96
RPL39-202ENST00000468844 KDM5BQ9UGL1 1544 aa27.26■■□□□ 1.95
RPL39-202ENST00000468844 EHBP1L1Q8N3D4 1523 aa27.22■■□□□ 1.95
RPL39-202ENST00000468844 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.2■■□□□ 1.95
RPL39-202ENST00000468844 HNRNPUL2Q1KMD3 747 aaKnown RBP27.2■■□□□ 1.95
RPL39-202ENST00000468844 CYB5RLQ6IPT4 315 aa27.2■■□□□ 1.94
RPL39-202ENST00000468844 MTUS2Q5JR59 1369 aa27.18■■□□□ 1.94
RPL39-202ENST00000468844 SUPT6HQ7KZ85 1726 aaKnown RBP27.18■■□□□ 1.94
RPL39-202ENST00000468844 CDK11AQ9UQ88 783 aaPredicted RBP27.12■■□□□ 1.93
RPL39-202ENST00000468844 TROQ12816 1431 aaPredicted RBP27.11■■□□□ 1.93
RPL39-202ENST00000468844 KIF14Q15058 1648 aa27.11■■□□□ 1.93
RPL39-202ENST00000468844 NCOA2Q15596 1464 aa27.06■■□□□ 1.92
RPL39-202ENST00000468844 PLEKHD1A6NEE1 506 aa27.06■■□□□ 1.92
RPL39-202ENST00000468844 DNAJC5Q9H3Z4 198 aa27.04■■□□□ 1.92
RPL39-202ENST00000468844 PHLDB1Q86UU1 1377 aa27.01■■□□□ 1.91
RPL39-202ENST00000468844 NPM1P06748 294 aaKnown RBP eCLIP27■■□□□ 1.91
RPL39-202ENST00000468844 WDR7Q9Y4E6 1490 aa27■■□□□ 1.91
RPL39-202ENST00000468844 ASXL2Q76L83 1435 aa26.99■■□□□ 1.91
RPL39-202ENST00000468844 CDC42BPAQ5VT25 1732 aa26.97■■□□□ 1.91
RPL39-202ENST00000468844 MAPKBP1O60336 1514 aa26.97■■□□□ 1.91
RPL39-202ENST00000468844 TTC37Q6PGP7 1564 aa26.95■■□□□ 1.9
RPL39-202ENST00000468844 ABCC10Q5T3U5 1492 aa26.94■■□□□ 1.9
RPL39-202ENST00000468844 ITSN2Q9NZM3 1697 aa26.94■■□□□ 1.9
RPL39-202ENST00000468844 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.93■■□□□ 1.9
RPL39-202ENST00000468844 MYOM3Q5VTT5 1437 aa26.91■■□□□ 1.9
RPL39-202ENST00000468844 MYO5CQ9NQX4 1742 aa26.9■■□□□ 1.9
RPL39-202ENST00000468844 RRBP1Q9P2E9 1410 aaKnown RBP26.89■■□□□ 1.89
RPL39-202ENST00000468844 CDC42BPBQ9Y5S2 1711 aa26.89■■□□□ 1.89
RPL39-202ENST00000468844 TRIM26Q12899 539 aaPredicted RBP26.88■■□□□ 1.89
RPL39-202ENST00000468844 KCNH8Q96L42 1107 aa26.88■■□□□ 1.89
RPL39-202ENST00000468844 PREX2Q70Z35 1606 aa26.87■■□□□ 1.89
RPL39-202ENST00000468844 ABCA9Q8IUA7 1624 aa26.87■■□□□ 1.89
RPL39-202ENST00000468844 CCNB3Q8WWL7 1395 aa26.86■■□□□ 1.89
RPL39-202ENST00000468844 GPATCH8Q9UKJ3 1502 aaKnown RBP26.86■■□□□ 1.89
RPL39-202ENST00000468844 FGD6Q6ZV73 1430 aa26.85■■□□□ 1.89
RPL39-202ENST00000468844 PTPN23Q9H3S7 1636 aa26.83■■□□□ 1.88
RPL39-202ENST00000468844 MIA2Q96PC5 1412 aa26.79■■□□□ 1.88
RPL39-202ENST00000468844 DIP2BQ9P265 1576 aa26.78■■□□□ 1.88
RPL39-202ENST00000468844 KIF13AQ9H1H9 1805 aa26.77■■□□□ 1.88
RPL39-202ENST00000468844 PCGF6Q9BYE7 350 aa26.74■■□□□ 1.87
RPL39-202ENST00000468844 TCOF1Q13428 1488 aaKnown RBP26.74■■□□□ 1.87
RPL39-202ENST00000468844 GLI2P10070 1586 aa26.73■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms