RNA–Protein interactions for RNA: ENST00000468612.5

NEDD9-207, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 809 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-207ENST00000468612 KDM6BO15054 1643 aa20.68■□□□□ 0.9
NEDD9-207ENST00000468612 JPH4Q96JJ6 628 aa20.63■□□□□ 0.89
NEDD9-207ENST00000468612 WRNQ14191 1432 aaPredicted RBP eCLIP20.61■□□□□ 0.89
NEDD9-207ENST00000468612 NPM1P06748 294 aaKnown RBP eCLIP20.61■□□□□ 0.89
NEDD9-207ENST00000468612 ERICH3Q5RHP9 1530 aa20.58■□□□□ 0.88
NEDD9-207ENST00000468612 ADCY10Q96PN6 1610 aa20.57■□□□□ 0.88
NEDD9-207ENST00000468612 TSPOAP1O95153 1857 aa20.52■□□□□ 0.88
NEDD9-207ENST00000468612 RUSC2Q8N2Y8 1516 aa20.5■□□□□ 0.87
NEDD9-207ENST00000468612 ADGRL1O94910 1474 aa20.48■□□□□ 0.87
NEDD9-207ENST00000468612 BIVM-ERCC5R4GMW8 1640 aa20.46■□□□□ 0.87
NEDD9-207ENST00000468612 TOP2BQ02880 1626 aa20.45■□□□□ 0.87
NEDD9-207ENST00000468612 HECW2Q9P2P5 1572 aa20.44■□□□□ 0.86
NEDD9-207ENST00000468612 PPRC1Q5VV67 1664 aaKnown RBP20.37■□□□□ 0.85
NEDD9-207ENST00000468612 GLI2P10070 1586 aa20.33■□□□□ 0.84
NEDD9-207ENST00000468612 KIAA0586Q9BVV6 1533 aa20.32■□□□□ 0.84
NEDD9-207ENST00000468612 COL17A1Q9UMD9 1497 aaPredicted RBP20.3■□□□□ 0.84
NEDD9-207ENST00000468612 ABCC2Q92887 1545 aa20.28■□□□□ 0.84
NEDD9-207ENST00000468612 PLB1Q6P1J6 1458 aa20.28■□□□□ 0.84
NEDD9-207ENST00000468612 PTPRGP23470 1445 aa20.27■□□□□ 0.84
NEDD9-207ENST00000468612 ASXL2Q76L83 1435 aa20.27■□□□□ 0.84
NEDD9-207ENST00000468612 FBXO41Q8TF61 875 aa20.26■□□□□ 0.83
NEDD9-207ENST00000468612 TNIKQ9UKE5 1360 aa20.19■□□□□ 0.82
NEDD9-207ENST00000468612 UHRF1BP1LA0JNW5 1464 aa20.17■□□□□ 0.82
NEDD9-207ENST00000468612 EPRSP07814 1512 aaKnown RBP20.17■□□□□ 0.82
NEDD9-207ENST00000468612 MAP3K4Q9Y6R4 1608 aa20.16■□□□□ 0.82
NEDD9-207ENST00000468612 IGF1RP08069 1367 aa20.16■□□□□ 0.82
NEDD9-207ENST00000468612 TEX14Q8IWB6 1497 aa20.16■□□□□ 0.82
NEDD9-207ENST00000468612 TTBK1Q5TCY1 1321 aaPredicted RBP20.15■□□□□ 0.82
NEDD9-207ENST00000468612 CUL7Q14999 1698 aa20.15■□□□□ 0.82
NEDD9-207ENST00000468612 CARMIL2Q6F5E8 1435 aa20.12■□□□□ 0.81
NEDD9-207ENST00000468612 UACAQ9BZF9 1416 aa20.1■□□□□ 0.81
NEDD9-207ENST00000468612 KDM5BQ9UGL1 1544 aa20.08■□□□□ 0.81
NEDD9-207ENST00000468612 KIF27Q86VH2 1401 aa20.02■□□□□ 0.8
NEDD9-207ENST00000468612 SUPT5HO00267 1087 aaKnown RBP20.01■□□□□ 0.79
NEDD9-207ENST00000468612 ZCCHC11Q5TAX3 1644 aaKnown RBP20.01■□□□□ 0.79
NEDD9-207ENST00000468612 IQGAP2Q13576 1575 aa20■□□□□ 0.79
NEDD9-207ENST00000468612 DISP1Q96F81 1524 aa20■□□□□ 0.79
NEDD9-207ENST00000468612 CARMIL1Q5VZK9 1371 aa19.98■□□□□ 0.79
NEDD9-207ENST00000468612 WDR7Q9Y4E6 1490 aa19.96■□□□□ 0.79
NEDD9-207ENST00000468612 MAGI3Q5TCQ9 1506 aa19.95■□□□□ 0.78
NEDD9-207ENST00000468612 KIF21BO75037 1637 aa19.93■□□□□ 0.78
NEDD9-207ENST00000468612 LMTK3Q96Q04 1460 aa19.92■□□□□ 0.78
NEDD9-207ENST00000468612 CD109Q6YHK3 1445 aa19.92■□□□□ 0.78
NEDD9-207ENST00000468612 PTPRMP28827 1452 aa19.89■□□□□ 0.77
NEDD9-207ENST00000468612 CFAP43Q8NDM7 1665 aa19.88■□□□□ 0.77
NEDD9-207ENST00000468612 UGGT2Q9NYU1 1516 aa19.88■□□□□ 0.77
NEDD9-207ENST00000468612 ADAMTSL3P82987 1691 aa19.85■□□□□ 0.77
NEDD9-207ENST00000468612 KIAA0556O60303 1618 aa19.84■□□□□ 0.77
NEDD9-207ENST00000468612 PCF11O94913 1555 aaKnown RBP19.83■□□□□ 0.76
NEDD9-207ENST00000468612 ARAP3Q8WWN8 1544 aa19.81■□□□□ 0.76
NEDD9-207ENST00000468612 KCNH8Q96L42 1107 aa19.79■□□□□ 0.76
NEDD9-207ENST00000468612 SOCS7O14512 581 aa19.74■□□□□ 0.75
NEDD9-207ENST00000468612 ILDR2Q71H61 639 aa19.74■□□□□ 0.75
NEDD9-207ENST00000468612 ABCA8O94911 1581 aa19.73■□□□□ 0.75
NEDD9-207ENST00000468612 BCORL1Q5H9F3 1711 aa19.72■□□□□ 0.75
NEDD9-207ENST00000468612 MADDQ8WXG6 1647 aa19.71■□□□□ 0.75
NEDD9-207ENST00000468612 RAPGEF2Q9Y4G8 1499 aa19.71■□□□□ 0.75
NEDD9-207ENST00000468612 CERKQ8TCT0 537 aa19.69■□□□□ 0.74
NEDD9-207ENST00000468612 PHLDB1Q86UU1 1377 aa19.69■□□□□ 0.74
NEDD9-207ENST00000468612 DISP3Q9P2K9 1392 aa19.66■□□□□ 0.74
NEDD9-207ENST00000468612 RAPGEF3O95398 923 aa19.65■□□□□ 0.74
NEDD9-207ENST00000468612 HSPA2P54652 639 aa19.64■□□□□ 0.73
NEDD9-207ENST00000468612 GOLGA3Q08378 1498 aa19.62■□□□□ 0.73
NEDD9-207ENST00000468612 ARID4BQ4LE39 1312 aaPredicted RBP19.61■□□□□ 0.73
NEDD9-207ENST00000468612 ABCA9Q8IUA7 1624 aa19.61■□□□□ 0.73
NEDD9-207ENST00000468612 FRMPD1Q5SYB0 1578 aa19.61■□□□□ 0.73
NEDD9-207ENST00000468612 RIMS1Q86UR5 1692 aaKnown RBP19.59■□□□□ 0.73
NEDD9-207ENST00000468612 NEO1Q92859 1461 aa19.59■□□□□ 0.73
NEDD9-207ENST00000468612 ATP10BO94823 1461 aa19.56■□□□□ 0.72
NEDD9-207ENST00000468612 CTTNBP2Q8WZ74 1663 aa19.55■□□□□ 0.72
NEDD9-207ENST00000468612 ARHGEF40Q8TER5 1519 aa19.54■□□□□ 0.72
NEDD9-207ENST00000468612 ARID3CA6NKF2 412 aa19.5■□□□□ 0.71
NEDD9-207ENST00000468612 SPATA31D1Q6ZQQ2 1576 aa19.47■□□□□ 0.71
NEDD9-207ENST00000468612 PLPPR3Q6T4P5 718 aa19.46■□□□□ 0.71
NEDD9-207ENST00000468612 POGZQ7Z3K3 1410 aa19.45■□□□□ 0.7
NEDD9-207ENST00000468612 FANCAO15360 1455 aa19.44■□□□□ 0.7
NEDD9-207ENST00000468612 RICTORQ6R327 1708 aa19.44■□□□□ 0.7
NEDD9-207ENST00000468612 FHOD3Q2V2M9 1422 aa19.43■□□□□ 0.7
NEDD9-207ENST00000468612 DENND4BO75064 1496 aaPredicted RBP19.43■□□□□ 0.7
NEDD9-207ENST00000468612 AKNAQ7Z591 1439 aa19.42■□□□□ 0.7
NEDD9-207ENST00000468612 SIGLEC1Q9BZZ2 1709 aa19.42■□□□□ 0.7
NEDD9-207ENST00000468612 TTC37Q6PGP7 1564 aa19.4■□□□□ 0.7
NEDD9-207ENST00000468612 YEATS2Q9ULM3 1422 aa19.39■□□□□ 0.69
NEDD9-207ENST00000468612 ZMYM4Q5VZL5 1548 aa19.39■□□□□ 0.69
NEDD9-207ENST00000468612 FAM9AQ8IZU1 332 aaPredicted RBP19.38■□□□□ 0.69
NEDD9-207ENST00000468612 P3H3Q8IVL6 736 aa19.36■□□□□ 0.69
NEDD9-207ENST00000468612 FER1L4A9Z1Z3 1794 aa19.36■□□□□ 0.69
NEDD9-207ENST00000468612 ZFYVE16Q7Z3T8 1539 aa19.35■□□□□ 0.69
NEDD9-207ENST00000468612 STRCQ7RTU9 1775 aa19.35■□□□□ 0.69
NEDD9-207ENST00000468612 DMRT2Q9Y5R5 561 aa19.35■□□□□ 0.69
NEDD9-207ENST00000468612 EFCAB5A4FU69 1503 aa19.35■□□□□ 0.69
NEDD9-207ENST00000468612 PRXQ9BXM0 1461 aa19.35■□□□□ 0.69
NEDD9-207ENST00000468612 PREX1Q8TCU6 1659 aa19.34■□□□□ 0.69
NEDD9-207ENST00000468612 RAPGEF6Q8TEU7 1601 aa19.34■□□□□ 0.69
NEDD9-207ENST00000468612 MLECQ14165 292 aa19.33■□□□□ 0.68
NEDD9-207ENST00000468612 MAGI2Q86UL8 1455 aa19.33■□□□□ 0.68
NEDD9-207ENST00000468612 CFAP74Q9C0B2 1584 aa19.32■□□□□ 0.68
NEDD9-207ENST00000468612 ARHGEF12Q9NZN5 1544 aa19.31■□□□□ 0.68
NEDD9-207ENST00000468612 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.3■□□□□ 0.68
NEDD9-207ENST00000468612 HNRNPUL2Q1KMD3 747 aaKnown RBP19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms