RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 RUSC2Q8N2Y8 1516 aa24.75■■□□□ 1.55
COL27A1-203ENST00000468565 ERCC6L2Q5T890 1561 aa24.72■■□□□ 1.55
COL27A1-203ENST00000468565 CARMIL1Q5VZK9 1371 aa24.68■■□□□ 1.54
COL27A1-203ENST00000468565 KIAA0586Q9BVV6 1533 aa24.63■■□□□ 1.53
COL27A1-203ENST00000468565 JPH4Q96JJ6 628 aa24.62■■□□□ 1.53
COL27A1-203ENST00000468565 PRG4Q92954 1404 aaPredicted RBP24.62■■□□□ 1.53
COL27A1-203ENST00000468565 RAPGEF2Q9Y4G8 1499 aa24.53■■□□□ 1.52
COL27A1-203ENST00000468565 IQGAP2Q13576 1575 aa24.48■■□□□ 1.51
COL27A1-203ENST00000468565 TRHP20396 242 aaPredicted RBP24.42■■□□□ 1.5
COL27A1-203ENST00000468565 CTTNBP2Q8WZ74 1663 aa24.41■■□□□ 1.5
COL27A1-203ENST00000468565 PRXQ9BXM0 1461 aa24.4■■□□□ 1.5
COL27A1-203ENST00000468565 CARMIL2Q6F5E8 1435 aa24.37■■□□□ 1.49
COL27A1-203ENST00000468565 UGGT2Q9NYU1 1516 aa24.35■■□□□ 1.49
COL27A1-203ENST00000468565 ADCY10Q96PN6 1610 aa24.33■■□□□ 1.48
COL27A1-203ENST00000468565 EEA1Q15075 1411 aa24.32■■□□□ 1.48
COL27A1-203ENST00000468565 DISP1Q96F81 1524 aa24.3■■□□□ 1.48
COL27A1-203ENST00000468565 TNIKQ9UKE5 1360 aa24.3■■□□□ 1.48
COL27A1-203ENST00000468565 PTPRGP23470 1445 aa24.29■■□□□ 1.48
COL27A1-203ENST00000468565 KIAA0556O60303 1618 aa24.26■■□□□ 1.47
COL27A1-203ENST00000468565 CSRNP3Q8WYN3 585 aa24.26■■□□□ 1.47
COL27A1-203ENST00000468565 MAPKBP1O60336 1514 aa24.23■■□□□ 1.47
COL27A1-203ENST00000468565 KIF13AQ9H1H9 1805 aa24.22■■□□□ 1.47
COL27A1-203ENST00000468565 NPM1P06748 294 aaKnown RBP eCLIP24.2■■□□□ 1.46
COL27A1-203ENST00000468565 GOLGA3Q08378 1498 aa24.18■■□□□ 1.46
COL27A1-203ENST00000468565 UHRF1BP1LA0JNW5 1464 aa24.17■■□□□ 1.46
COL27A1-203ENST00000468565 TTBK1Q5TCY1 1321 aaPredicted RBP24.14■■□□□ 1.46
COL27A1-203ENST00000468565 ABCC2Q92887 1545 aa24.14■■□□□ 1.45
COL27A1-203ENST00000468565 UACAQ9BZF9 1416 aa24.14■■□□□ 1.45
COL27A1-203ENST00000468565 ABCC10Q5T3U5 1492 aa24.12■■□□□ 1.45
COL27A1-203ENST00000468565 KIF21BO75037 1637 aa24.12■■□□□ 1.45
COL27A1-203ENST00000468565 DIP2BQ9P265 1576 aa24.1■■□□□ 1.45
COL27A1-203ENST00000468565 FAM9AQ8IZU1 332 aaPredicted RBP24.06■■□□□ 1.44
COL27A1-203ENST00000468565 KDM5BQ9UGL1 1544 aa24.04■■□□□ 1.44
COL27A1-203ENST00000468565 SAMD9Q5K651 1589 aa24.04■■□□□ 1.44
COL27A1-203ENST00000468565 ZCCHC11Q5TAX3 1644 aaKnown RBP24.01■■□□□ 1.43
COL27A1-203ENST00000468565 ABCA8O94911 1581 aa24.01■■□□□ 1.43
COL27A1-203ENST00000468565 FAM69CQ0P6D2 419 aa24.01■■□□□ 1.43
COL27A1-203ENST00000468565 PLB1Q6P1J6 1458 aa23.99■■□□□ 1.43
COL27A1-203ENST00000468565 ASXL2Q76L83 1435 aa23.98■■□□□ 1.43
COL27A1-203ENST00000468565 GLI2P10070 1586 aa23.94■■□□□ 1.42
COL27A1-203ENST00000468565 TSPOAP1O95153 1857 aa23.92■■□□□ 1.42
COL27A1-203ENST00000468565 P3H3Q8IVL6 736 aa23.88■■□□□ 1.41
COL27A1-203ENST00000468565 EFCAB5A4FU69 1503 aa23.88■■□□□ 1.41
COL27A1-203ENST00000468565 EPRSP07814 1512 aaKnown RBP23.86■■□□□ 1.41
COL27A1-203ENST00000468565 RAPGEF6Q8TEU7 1601 aa23.85■■□□□ 1.41
COL27A1-203ENST00000468565 WDR7Q9Y4E6 1490 aa23.85■■□□□ 1.41
COL27A1-203ENST00000468565 PPRC1Q5VV67 1664 aaKnown RBP23.83■■□□□ 1.41
COL27A1-203ENST00000468565 MAP3K4Q9Y6R4 1608 aa23.83■■□□□ 1.4
COL27A1-203ENST00000468565 FHOD3Q2V2M9 1422 aa23.81■■□□□ 1.4
COL27A1-203ENST00000468565 UBTFP17480 764 aaKnown RBP23.79■■□□□ 1.4
COL27A1-203ENST00000468565 RANGAP1P46060 587 aaPredicted RBP23.79■■□□□ 1.4
COL27A1-203ENST00000468565 ATP10BO94823 1461 aa23.77■■□□□ 1.4
COL27A1-203ENST00000468565 KDM6BO15054 1643 aa23.77■■□□□ 1.39
COL27A1-203ENST00000468565 CFAP43Q8NDM7 1665 aa23.74■■□□□ 1.39
COL27A1-203ENST00000468565 EHMT2Q96KQ7 1210 aa23.73■■□□□ 1.39
COL27A1-203ENST00000468565 NUP153P49790 1475 aaKnown RBP23.72■■□□□ 1.39
COL27A1-203ENST00000468565 TEX14Q8IWB6 1497 aa23.7■■□□□ 1.38
COL27A1-203ENST00000468565 ARHGAP35Q9NRY4 1499 aa23.68■■□□□ 1.38
COL27A1-203ENST00000468565 ARID3CA6NKF2 412 aa23.67■■□□□ 1.38
COL27A1-203ENST00000468565 SENP3Q9H4L4 574 aaPredicted RBP23.66■■□□□ 1.38
COL27A1-203ENST00000468565 KCNH8Q96L42 1107 aa23.65■■□□□ 1.38
COL27A1-203ENST00000468565 MAGI3Q5TCQ9 1506 aa23.63■■□□□ 1.37
COL27A1-203ENST00000468565 FMN1Q68DA7 1419 aa23.63■■□□□ 1.37
COL27A1-203ENST00000468565 CD109Q6YHK3 1445 aa23.63■■□□□ 1.37
COL27A1-203ENST00000468565 ABCA9Q8IUA7 1624 aa23.61■■□□□ 1.37
COL27A1-203ENST00000468565 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.59■■□□□ 1.37
COL27A1-203ENST00000468565 HNRNPUL2Q1KMD3 747 aaKnown RBP23.59■■□□□ 1.37
COL27A1-203ENST00000468565 HECW1Q76N89 1606 aa23.58■■□□□ 1.36
COL27A1-203ENST00000468565 COL17A1Q9UMD9 1497 aaPredicted RBP23.54■■□□□ 1.36
COL27A1-203ENST00000468565 CDK13Q14004 1512 aaKnown RBP23.52■■□□□ 1.36
COL27A1-203ENST00000468565 PLEKHD1A6NEE1 506 aa23.51■■□□□ 1.35
COL27A1-203ENST00000468565 LRRIQ1Q96JM4 1722 aa23.47■■□□□ 1.35
COL27A1-203ENST00000468565 CLIP1P30622 1438 aa23.44■■□□□ 1.34
COL27A1-203ENST00000468565 PHLDB1Q86UU1 1377 aa23.44■■□□□ 1.34
COL27A1-203ENST00000468565 ARAP3Q8WWN8 1544 aa23.44■■□□□ 1.34
COL27A1-203ENST00000468565 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.44■■□□□ 1.34
COL27A1-203ENST00000468565 PCF11O94913 1555 aaKnown RBP23.43■■□□□ 1.34
COL27A1-203ENST00000468565 NEO1Q92859 1461 aa23.42■■□□□ 1.34
COL27A1-203ENST00000468565 CASKIN1Q8WXD9 1431 aa23.42■■□□□ 1.34
COL27A1-203ENST00000468565 ATP1B4Q9UN42 357 aaPredicted RBP23.41■■□□□ 1.34
COL27A1-203ENST00000468565 TTC37Q6PGP7 1564 aa23.41■■□□□ 1.34
COL27A1-203ENST00000468565 CFAP74Q9C0B2 1584 aa23.38■■□□□ 1.33
COL27A1-203ENST00000468565 CCDC18Q5T9S5 1454 aa23.38■■□□□ 1.33
COL27A1-203ENST00000468565 CDK11AQ9UQ88 783 aaPredicted RBP23.37■■□□□ 1.33
COL27A1-203ENST00000468565 FYCO1Q9BQS8 1478 aa23.37■■□□□ 1.33
COL27A1-203ENST00000468565 KIF14Q15058 1648 aa23.34■■□□□ 1.33
COL27A1-203ENST00000468565 TROQ12816 1431 aaPredicted RBP23.33■■□□□ 1.33
COL27A1-203ENST00000468565 MYO5CQ9NQX4 1742 aa23.33■■□□□ 1.32
COL27A1-203ENST00000468565 FANCAO15360 1455 aa23.31■■□□□ 1.32
COL27A1-203ENST00000468565 CEP162Q5TB80 1403 aa23.29■■□□□ 1.32
COL27A1-203ENST00000468565 FRMPD1Q5SYB0 1578 aa23.28■■□□□ 1.32
COL27A1-203ENST00000468565 PLCH2O75038 1416 aa23.28■■□□□ 1.32
COL27A1-203ENST00000468565 AKNAQ7Z591 1439 aa23.27■■□□□ 1.32
COL27A1-203ENST00000468565 RICTORQ6R327 1708 aa23.27■■□□□ 1.32
COL27A1-203ENST00000468565 KDM4FA0A1W2PPD8 638 aa23.25■■□□□ 1.31
COL27A1-203ENST00000468565 DENND4BO75064 1496 aaPredicted RBP23.23■■□□□ 1.31
COL27A1-203ENST00000468565 ADGRL1O94910 1474 aa23.22■■□□□ 1.31
COL27A1-203ENST00000468565 RAPGEF3O95398 923 aa23.21■■□□□ 1.31
COL27A1-203ENST00000468565 PLPPR3Q6T4P5 718 aa23.2■■□□□ 1.3
COL27A1-203ENST00000468565 CDC42BPBQ9Y5S2 1711 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms