RNA–Protein interactions for RNA: ENST00000468459.5

COL16A1-208, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 620 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-208ENST00000468459 RUSC2Q8N2Y8 1516 aa25.23■■□□□ 1.63
COL16A1-208ENST00000468459 KIAA0586Q9BVV6 1533 aa25.19■■□□□ 1.62
COL16A1-208ENST00000468459 CARMIL1Q5VZK9 1371 aa25.15■■□□□ 1.62
COL16A1-208ENST00000468459 CUL7Q14999 1698 aa25.13■■□□□ 1.61
COL16A1-208ENST00000468459 NPM1P06748 294 aaKnown RBP eCLIP24.96■■□□□ 1.59
COL16A1-208ENST00000468459 ADCY10Q96PN6 1610 aa24.94■■□□□ 1.58
COL16A1-208ENST00000468459 CHIC1Q5VXU3 224 aa24.94■■□□□ 1.58
COL16A1-208ENST00000468459 PTPRGP23470 1445 aa24.94■■□□□ 1.58
COL16A1-208ENST00000468459 MAPKBP1O60336 1514 aa24.93■■□□□ 1.58
COL16A1-208ENST00000468459 ABCC10Q5T3U5 1492 aa24.93■■□□□ 1.58
COL16A1-208ENST00000468459 RAPGEF2Q9Y4G8 1499 aa24.9■■□□□ 1.58
COL16A1-208ENST00000468459 FAM69CQ0P6D2 419 aa24.9■■□□□ 1.58
COL16A1-208ENST00000468459 TNIKQ9UKE5 1360 aa24.9■■□□□ 1.58
COL16A1-208ENST00000468459 CARMIL2Q6F5E8 1435 aa24.89■■□□□ 1.58
COL16A1-208ENST00000468459 IQGAP2Q13576 1575 aa24.87■■□□□ 1.57
COL16A1-208ENST00000468459 KIF13AQ9H1H9 1805 aa24.86■■□□□ 1.57
COL16A1-208ENST00000468459 DISP1Q96F81 1524 aa24.84■■□□□ 1.57
COL16A1-208ENST00000468459 DIP2BQ9P265 1576 aa24.8■■□□□ 1.56
COL16A1-208ENST00000468459 UGGT2Q9NYU1 1516 aa24.8■■□□□ 1.56
COL16A1-208ENST00000468459 TTBK1Q5TCY1 1321 aaPredicted RBP24.8■■□□□ 1.56
COL16A1-208ENST00000468459 ABCC2Q92887 1545 aa24.77■■□□□ 1.56
COL16A1-208ENST00000468459 UHRF1BP1LA0JNW5 1464 aa24.77■■□□□ 1.56
COL16A1-208ENST00000468459 UACAQ9BZF9 1416 aa24.75■■□□□ 1.55
COL16A1-208ENST00000468459 PRXQ9BXM0 1461 aa24.74■■□□□ 1.55
COL16A1-208ENST00000468459 ASXL2Q76L83 1435 aa24.68■■□□□ 1.54
COL16A1-208ENST00000468459 PLB1Q6P1J6 1458 aa24.66■■□□□ 1.54
COL16A1-208ENST00000468459 KIAA0556O60303 1618 aa24.66■■□□□ 1.54
COL16A1-208ENST00000468459 KDM5BQ9UGL1 1544 aa24.66■■□□□ 1.54
COL16A1-208ENST00000468459 AEBP2Q6ZN18 517 aaPredicted RBP24.64■■□□□ 1.54
COL16A1-208ENST00000468459 GLI2P10070 1586 aa24.59■■□□□ 1.53
COL16A1-208ENST00000468459 FAM9AQ8IZU1 332 aaPredicted RBP24.58■■□□□ 1.53
COL16A1-208ENST00000468459 CSRNP3Q8WYN3 585 aa24.56■■□□□ 1.52
COL16A1-208ENST00000468459 GOLGA3Q08378 1498 aa24.56■■□□□ 1.52
COL16A1-208ENST00000468459 EEA1Q15075 1411 aa24.54■■□□□ 1.52
COL16A1-208ENST00000468459 EPRSP07814 1512 aaKnown RBP24.54■■□□□ 1.52
COL16A1-208ENST00000468459 CTTNBP2Q8WZ74 1663 aa24.52■■□□□ 1.52
COL16A1-208ENST00000468459 KDM6BO15054 1643 aa24.51■■□□□ 1.51
COL16A1-208ENST00000468459 ZCCHC11Q5TAX3 1644 aaKnown RBP24.48■■□□□ 1.51
COL16A1-208ENST00000468459 ABCA8O94911 1581 aa24.47■■□□□ 1.51
COL16A1-208ENST00000468459 TSPOAP1O95153 1857 aa24.47■■□□□ 1.51
COL16A1-208ENST00000468459 PPRC1Q5VV67 1664 aaKnown RBP24.46■■□□□ 1.51
COL16A1-208ENST00000468459 WDR7Q9Y4E6 1490 aa24.45■■□□□ 1.5
COL16A1-208ENST00000468459 COL17A1Q9UMD9 1497 aaPredicted RBP24.43■■□□□ 1.5
COL16A1-208ENST00000468459 MAP3K4Q9Y6R4 1608 aa24.39■■□□□ 1.5
COL16A1-208ENST00000468459 KDM4FA0A1W2PPD8 638 aa24.39■■□□□ 1.49
COL16A1-208ENST00000468459 P3H3Q8IVL6 736 aa24.39■■□□□ 1.49
COL16A1-208ENST00000468459 TEX14Q8IWB6 1497 aa24.35■■□□□ 1.49
COL16A1-208ENST00000468459 KIF21BO75037 1637 aa24.32■■□□□ 1.48
COL16A1-208ENST00000468459 KCNH8Q96L42 1107 aa24.32■■□□□ 1.48
COL16A1-208ENST00000468459 SAMD9Q5K651 1589 aa24.32■■□□□ 1.48
COL16A1-208ENST00000468459 ATP10BO94823 1461 aa24.32■■□□□ 1.48
COL16A1-208ENST00000468459 CD109Q6YHK3 1445 aa24.3■■□□□ 1.48
COL16A1-208ENST00000468459 EHMT2Q96KQ7 1210 aa24.3■■□□□ 1.48
COL16A1-208ENST00000468459 MAGI3Q5TCQ9 1506 aa24.3■■□□□ 1.48
COL16A1-208ENST00000468459 ARID3CA6NKF2 412 aa24.27■■□□□ 1.48
COL16A1-208ENST00000468459 FHOD3Q2V2M9 1422 aa24.19■■□□□ 1.46
COL16A1-208ENST00000468459 CFAP43Q8NDM7 1665 aa24.18■■□□□ 1.46
COL16A1-208ENST00000468459 RANGAP1P46060 587 aaPredicted RBP24.18■■□□□ 1.46
COL16A1-208ENST00000468459 NUP153P49790 1475 aaKnown RBP24.18■■□□□ 1.46
COL16A1-208ENST00000468459 RAPGEF6Q8TEU7 1601 aa24.16■■□□□ 1.46
COL16A1-208ENST00000468459 ADGRL1O94910 1474 aa24.13■■□□□ 1.45
COL16A1-208ENST00000468459 UBTFP17480 764 aaKnown RBP24.1■■□□□ 1.45
COL16A1-208ENST00000468459 ARAP3Q8WWN8 1544 aa24.1■■□□□ 1.45
COL16A1-208ENST00000468459 EFCAB5A4FU69 1503 aa24.09■■□□□ 1.45
COL16A1-208ENST00000468459 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.08■■□□□ 1.45
COL16A1-208ENST00000468459 HNRNPUL2Q1KMD3 747 aaKnown RBP24.08■■□□□ 1.45
COL16A1-208ENST00000468459 ABCA9Q8IUA7 1624 aa24.08■■□□□ 1.45
COL16A1-208ENST00000468459 PHLDB1Q86UU1 1377 aa24.07■■□□□ 1.44
COL16A1-208ENST00000468459 PLEKHD1A6NEE1 506 aa24.02■■□□□ 1.44
COL16A1-208ENST00000468459 NEO1Q92859 1461 aa24■■□□□ 1.43
COL16A1-208ENST00000468459 RAPGEF3O95398 923 aa23.97■■□□□ 1.43
COL16A1-208ENST00000468459 ARHGAP35Q9NRY4 1499 aa23.95■■□□□ 1.42
COL16A1-208ENST00000468459 LOC105371045A0A1W2PR82 267 aa23.95■■□□□ 1.42
COL16A1-208ENST00000468459 FMN1Q68DA7 1419 aa23.91■■□□□ 1.42
COL16A1-208ENST00000468459 CDK13Q14004 1512 aaKnown RBP23.89■■□□□ 1.42
COL16A1-208ENST00000468459 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.89■■□□□ 1.42
COL16A1-208ENST00000468459 AKNAQ7Z591 1439 aa23.86■■□□□ 1.41
COL16A1-208ENST00000468459 FRMPD1Q5SYB0 1578 aa23.86■■□□□ 1.41
COL16A1-208ENST00000468459 FANCAO15360 1455 aa23.84■■□□□ 1.41
COL16A1-208ENST00000468459 DENND4BO75064 1496 aaPredicted RBP23.82■■□□□ 1.4
COL16A1-208ENST00000468459 TTC37Q6PGP7 1564 aa23.82■■□□□ 1.4
COL16A1-208ENST00000468459 PLCH2O75038 1416 aa23.8■■□□□ 1.4
COL16A1-208ENST00000468459 CLIP1P30622 1438 aa23.8■■□□□ 1.4
COL16A1-208ENST00000468459 ATP1B4Q9UN42 357 aaPredicted RBP23.8■■□□□ 1.4
COL16A1-208ENST00000468459 HECW1Q76N89 1606 aa23.77■■□□□ 1.4
COL16A1-208ENST00000468459 CEP162Q5TB80 1403 aa23.76■■□□□ 1.39
COL16A1-208ENST00000468459 CDK11AQ9UQ88 783 aaPredicted RBP23.76■■□□□ 1.39
COL16A1-208ENST00000468459 TROQ12816 1431 aaPredicted RBP23.73■■□□□ 1.39
COL16A1-208ENST00000468459 HECW2Q9P2P5 1572 aa23.73■■□□□ 1.39
COL16A1-208ENST00000468459 RICTORQ6R327 1708 aa23.71■■□□□ 1.39
COL16A1-208ENST00000468459 ADAMTSL3P82987 1691 aa23.71■■□□□ 1.39
COL16A1-208ENST00000468459 CFAP74Q9C0B2 1584 aa23.71■■□□□ 1.39
COL16A1-208ENST00000468459 ZMYM4Q5VZL5 1548 aa23.7■■□□□ 1.38
COL16A1-208ENST00000468459 ARHGEF40Q8TER5 1519 aa23.7■■□□□ 1.38
COL16A1-208ENST00000468459 SCAPERQ9BY12 1400 aa23.7■■□□□ 1.38
COL16A1-208ENST00000468459 PTPRMP28827 1452 aa23.69■■□□□ 1.38
COL16A1-208ENST00000468459 EFCAB2Q5VUJ9 269 aa23.69■■□□□ 1.38
COL16A1-208ENST00000468459 CASKIN1Q8WXD9 1431 aa23.68■■□□□ 1.38
COL16A1-208ENST00000468459 YEATS2Q9ULM3 1422 aa23.68■■□□□ 1.38
COL16A1-208ENST00000468459 MAGI2Q86UL8 1455 aa23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms