RNA–Protein interactions for RNA: ENST00000467789.5

SSR3-205, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2 BASIC

Gene SSR3, Length 1,039 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-205ENST00000467789 FHAD1B1AJZ9 1412 aa18.09■□□□□ 0.49
SSR3-205ENST00000467789 SCAF1Q9H7N4 1312 aaKnown RBP18.03■□□□□ 0.48
SSR3-205ENST00000467789 PPP4R3CPQ6ZMV5 832 aa18.03■□□□□ 0.48
SSR3-205ENST00000467789 NUP160Q12769 1436 aa18.03■□□□□ 0.48
SSR3-205ENST00000467789 CEP170Q5SW79 1584 aa17.99■□□□□ 0.47
SSR3-205ENST00000467789 KIF27Q86VH2 1401 aa17.96■□□□□ 0.47
SSR3-205ENST00000467789 SHROOM2Q13796 1616 aa17.94■□□□□ 0.46
SSR3-205ENST00000467789 CUL7Q14999 1698 aa17.91■□□□□ 0.46
SSR3-205ENST00000467789 IGF1RP08069 1367 aa17.89■□□□□ 0.45
SSR3-205ENST00000467789 RUSC2Q8N2Y8 1516 aa17.85■□□□□ 0.45
SSR3-205ENST00000467789 ERCC6L2Q5T890 1561 aa17.84■□□□□ 0.45
SSR3-205ENST00000467789 TRHP20396 242 aaPredicted RBP17.83■□□□□ 0.44
SSR3-205ENST00000467789 JPH4Q96JJ6 628 aa17.83■□□□□ 0.44
SSR3-205ENST00000467789 PRG4Q92954 1404 aaPredicted RBP17.81■□□□□ 0.44
SSR3-205ENST00000467789 KIAA0586Q9BVV6 1533 aa17.81■□□□□ 0.44
SSR3-205ENST00000467789 CARMIL1Q5VZK9 1371 aa17.79■□□□□ 0.44
SSR3-205ENST00000467789 NCBP3Q53F19 620 aaKnown RBP17.7■□□□□ 0.42
SSR3-205ENST00000467789 RAPGEF2Q9Y4G8 1499 aa17.67■□□□□ 0.42
SSR3-205ENST00000467789 IQGAP2Q13576 1575 aa17.66■□□□□ 0.42
SSR3-205ENST00000467789 CARMIL2Q6F5E8 1435 aa17.64■□□□□ 0.41
SSR3-205ENST00000467789 NPM1P06748 294 aaKnown RBP eCLIP17.61■□□□□ 0.41
SSR3-205ENST00000467789 CNKSR2Q8WXI2 1034 aa17.6■□□□□ 0.41
SSR3-205ENST00000467789 ADCY10Q96PN6 1610 aa17.58■□□□□ 0.41
SSR3-205ENST00000467789 MAPKBP1O60336 1514 aa17.57■□□□□ 0.4
SSR3-205ENST00000467789 PTPRGP23470 1445 aa17.57■□□□□ 0.4
SSR3-205ENST00000467789 TNIKQ9UKE5 1360 aa17.57■□□□□ 0.4
SSR3-205ENST00000467789 MAPK8IP2Q13387 824 aaPredicted RBP17.57■□□□□ 0.4
SSR3-205ENST00000467789 KCNA4P22459 653 aa17.56■□□□□ 0.4
SSR3-205ENST00000467789 UGGT2Q9NYU1 1516 aa17.55■□□□□ 0.4
SSR3-205ENST00000467789 KIF13AQ9H1H9 1805 aa17.54■□□□□ 0.4
SSR3-205ENST00000467789 CTTNBP2Q8WZ74 1663 aa17.53■□□□□ 0.4
SSR3-205ENST00000467789 DISP1Q96F81 1524 aa17.52■□□□□ 0.4
SSR3-205ENST00000467789 PRXQ9BXM0 1461 aa17.52■□□□□ 0.4
SSR3-205ENST00000467789 ABCC10Q5T3U5 1492 aa17.51■□□□□ 0.39
SSR3-205ENST00000467789 DMRT2Q9Y5R5 561 aa17.49■□□□□ 0.39
SSR3-205ENST00000467789 UHRF1BP1LA0JNW5 1464 aa17.49■□□□□ 0.39
SSR3-205ENST00000467789 KIAA0556O60303 1618 aa17.48■□□□□ 0.39
SSR3-205ENST00000467789 ABCC2Q92887 1545 aa17.47■□□□□ 0.39
SSR3-205ENST00000467789 EEA1Q15075 1411 aa17.47■□□□□ 0.39
SSR3-205ENST00000467789 DIP2BQ9P265 1576 aa17.46■□□□□ 0.39
SSR3-205ENST00000467789 GOLGA3Q08378 1498 aa17.46■□□□□ 0.39
SSR3-205ENST00000467789 UACAQ9BZF9 1416 aa17.46■□□□□ 0.39
SSR3-205ENST00000467789 FAM69CQ0P6D2 419 aa17.44■□□□□ 0.38
SSR3-205ENST00000467789 CSRNP3Q8WYN3 585 aa17.43■□□□□ 0.38
SSR3-205ENST00000467789 TTBK1Q5TCY1 1321 aaPredicted RBP17.42■□□□□ 0.38
SSR3-205ENST00000467789 PLB1Q6P1J6 1458 aa17.4■□□□□ 0.38
SSR3-205ENST00000467789 KDM5BQ9UGL1 1544 aa17.39■□□□□ 0.37
SSR3-205ENST00000467789 ASXL2Q76L83 1435 aa17.37■□□□□ 0.37
SSR3-205ENST00000467789 FAM9AQ8IZU1 332 aaPredicted RBP17.35■□□□□ 0.37
SSR3-205ENST00000467789 GLI2P10070 1586 aa17.34■□□□□ 0.37
SSR3-205ENST00000467789 ZCCHC11Q5TAX3 1644 aaKnown RBP17.32■□□□□ 0.36
SSR3-205ENST00000467789 ABCA8O94911 1581 aa17.3■□□□□ 0.36
SSR3-205ENST00000467789 TSPOAP1O95153 1857 aa17.29■□□□□ 0.36
SSR3-205ENST00000467789 NPM3O75607 178 aaKnown RBP17.28■□□□□ 0.36
SSR3-205ENST00000467789 SAMD9Q5K651 1589 aa17.28■□□□□ 0.36
SSR3-205ENST00000467789 EPRSP07814 1512 aaKnown RBP17.27■□□□□ 0.36
SSR3-205ENST00000467789 KDM6BO15054 1643 aa17.27■□□□□ 0.36
SSR3-205ENST00000467789 KIF21BO75037 1637 aa17.27■□□□□ 0.36
SSR3-205ENST00000467789 RNF216Q9NWF9 866 aaPredicted RBP17.26■□□□□ 0.35
SSR3-205ENST00000467789 WDR7Q9Y4E6 1490 aa17.25■□□□□ 0.35
SSR3-205ENST00000467789 MAP3K4Q9Y6R4 1608 aa17.24■□□□□ 0.35
SSR3-205ENST00000467789 PPRC1Q5VV67 1664 aaKnown RBP17.22■□□□□ 0.35
SSR3-205ENST00000467789 TEX14Q8IWB6 1497 aa17.21■□□□□ 0.35
SSR3-205ENST00000467789 P3H3Q8IVL6 736 aa17.18■□□□□ 0.34
SSR3-205ENST00000467789 EFCAB5A4FU69 1503 aa17.17■□□□□ 0.34
SSR3-205ENST00000467789 CFAP43Q8NDM7 1665 aa17.17■□□□□ 0.34
SSR3-205ENST00000467789 RAPGEF6Q8TEU7 1601 aa17.17■□□□□ 0.34
SSR3-205ENST00000467789 HOXD11P31277 338 aaPredicted RBP17.16■□□□□ 0.34
SSR3-205ENST00000467789 ATP10BO94823 1461 aa17.14■□□□□ 0.33
SSR3-205ENST00000467789 MAGI3Q5TCQ9 1506 aa17.12■□□□□ 0.33
SSR3-205ENST00000467789 CD109Q6YHK3 1445 aa17.12■□□□□ 0.33
SSR3-205ENST00000467789 KCNH8Q96L42 1107 aa17.1■□□□□ 0.33
SSR3-205ENST00000467789 FHOD3Q2V2M9 1422 aa17.1■□□□□ 0.33
SSR3-205ENST00000467789 UBTFP17480 764 aaKnown RBP17.08■□□□□ 0.32
SSR3-205ENST00000467789 NUP153P49790 1475 aaKnown RBP17.07■□□□□ 0.32
SSR3-205ENST00000467789 RANGAP1P46060 587 aaPredicted RBP17.07■□□□□ 0.32
SSR3-205ENST00000467789 ABCA9Q8IUA7 1624 aa17.06■□□□□ 0.32
SSR3-205ENST00000467789 COL17A1Q9UMD9 1497 aaPredicted RBP17.05■□□□□ 0.32
SSR3-205ENST00000467789 PHLDB1Q86UU1 1377 aa17.03■□□□□ 0.32
SSR3-205ENST00000467789 ARID3CA6NKF2 412 aa17.03■□□□□ 0.32
SSR3-205ENST00000467789 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.03■□□□□ 0.32
SSR3-205ENST00000467789 HNRNPUL2Q1KMD3 747 aaKnown RBP17.03■□□□□ 0.32
SSR3-205ENST00000467789 FMN1Q68DA7 1419 aa17.02■□□□□ 0.31
SSR3-205ENST00000467789 PLEKHD1A6NEE1 506 aa17■□□□□ 0.31
SSR3-205ENST00000467789 ARAP3Q8WWN8 1544 aa16.99■□□□□ 0.31
SSR3-205ENST00000467789 ARHGAP35Q9NRY4 1499 aa16.98■□□□□ 0.31
SSR3-205ENST00000467789 NEO1Q92859 1461 aa16.97■□□□□ 0.31
SSR3-205ENST00000467789 HECW1Q76N89 1606 aa16.96■□□□□ 0.3
SSR3-205ENST00000467789 POTEDQ86YR6 584 aa16.95■□□□□ 0.3
SSR3-205ENST00000467789 EHMT2Q96KQ7 1210 aa16.95■□□□□ 0.3
SSR3-205ENST00000467789 KDM4FA0A1W2PPD8 638 aa16.94■□□□□ 0.3
SSR3-205ENST00000467789 CFAP74Q9C0B2 1584 aa16.9■□□□□ 0.3
SSR3-205ENST00000467789 CDK11AQ9UQ88 783 aaPredicted RBP16.9■□□□□ 0.3
SSR3-205ENST00000467789 CDK13Q14004 1512 aaKnown RBP16.9■□□□□ 0.3
SSR3-205ENST00000467789 ADGRL1O94910 1474 aa16.89■□□□□ 0.29
SSR3-205ENST00000467789 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.89■□□□□ 0.294e-16■■□□□ 13.7
SSR3-205ENST00000467789 TTC37Q6PGP7 1564 aa16.85■□□□□ 0.29
SSR3-205ENST00000467789 ATP1B4Q9UN42 357 aaPredicted RBP16.85■□□□□ 0.29
SSR3-205ENST00000467789 FANCAO15360 1455 aa16.85■□□□□ 0.29
SSR3-205ENST00000467789 CCDC18Q5T9S5 1454 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms