RNA–Protein interactions for RNA: ENST00000467786.1

FGD3-204, Transcript of FYVE, RhoGEF and PH domain containing 3, humanhuman

TSL 2

Gene FGD3, Length 4,697 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGD3-204ENST00000467786 WRNQ14191 1432 aaPredicted RBP eCLIP16.8■□□□□ 0.28
FGD3-204ENST00000467786 PPM1GO15355 546 aaPredicted RBP16.79■□□□□ 0.28
FGD3-204ENST00000467786 RB1CC1Q8TDY2 1594 aa16.77■□□□□ 0.27
FGD3-204ENST00000467786 TIMELESSQ9UNS1 1208 aa16.75■□□□□ 0.27
FGD3-204ENST00000467786 BECN1Q14457 450 aa16.74■□□□□ 0.27
FGD3-204ENST00000467786 NOP58Q9Y2X3 529 aaKnown RBP16.74■□□□□ 0.27
FGD3-204ENST00000467786 CCER2I3L3R5 266 aa16.73■□□□□ 0.27
FGD3-204ENST00000467786 TSPY4P0CV99 314 aa16.72■□□□□ 0.27
FGD3-204ENST00000467786 TSPY10P0CW01 314 aa16.72■□□□□ 0.27
FGD3-204ENST00000467786 RRP7BPQ9NSQ0 103 aa16.72■□□□□ 0.27
FGD3-204ENST00000467786 KDM2AQ9Y2K7 1162 aa16.71■□□□□ 0.27
FGD3-204ENST00000467786 RBM19Q9Y4C8 960 aaKnown RBP16.7■□□□□ 0.26
FGD3-204ENST00000467786 ARXQ96QS3 562 aa16.69■□□□□ 0.26
FGD3-204ENST00000467786 SIN3AQ96ST3 1273 aa16.68■□□□□ 0.26
FGD3-204ENST00000467786 SLC24A1O60721 1099 aa16.67■□□□□ 0.26
FGD3-204ENST00000467786 CCNB3Q8WWL7 1395 aa16.67■□□□□ 0.26
FGD3-204ENST00000467786 ERICH6BQ5W0A0 696 aa16.66■□□□□ 0.26
FGD3-204ENST00000467786 KIF27Q86VH2 1401 aa16.64■□□□□ 0.25
FGD3-204ENST00000467786 B4GALNT3Q6L9W6 998 aa16.62■□□□□ 0.25
FGD3-204ENST00000467786 TSHZ2Q9NRE2 1034 aa16.61■□□□□ 0.25
FGD3-204ENST00000467786 TRIM44Q96DX7 344 aaPredicted RBP16.61■□□□□ 0.25
FGD3-204ENST00000467786 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.61■□□□□ 0.25
FGD3-204ENST00000467786 CHGAP10645 457 aaKnown RBP16.6■□□□□ 0.25
FGD3-204ENST00000467786 VPS8Q8N3P4 1428 aa16.59■□□□□ 0.25
FGD3-204ENST00000467786 DEKP35659 375 aaKnown RBP16.58■□□□□ 0.25
FGD3-204ENST00000467786 LAS1LQ9Y4W2 734 aaKnown RBP16.58■□□□□ 0.24
FGD3-204ENST00000467786 SOGA1O94964 1423 aa16.56■□□□□ 0.24
FGD3-204ENST00000467786 GOLGA6L22H0YM25 854 aa16.55■□□□□ 0.24
FGD3-204ENST00000467786 BAZ1AQ9NRL2 1556 aaPredicted RBP16.53■□□□□ 0.24
FGD3-204ENST00000467786 MYH16Q9H6N6 1097 aa16.53■□□□□ 0.24
FGD3-204ENST00000467786 CARD11Q9BXL7 1154 aa16.53■□□□□ 0.24
FGD3-204ENST00000467786 NACADO15069 1562 aa16.52■□□□□ 0.24
FGD3-204ENST00000467786 CDCA8Q53HL2 280 aa16.52■□□□□ 0.23
FGD3-204ENST00000467786 SETD5Q9C0A6 1442 aa16.51■□□□□ 0.23
FGD3-204ENST00000467786 FHAD1B1AJZ9 1412 aa16.51■□□□□ 0.23
FGD3-204ENST00000467786 RTN4Q9NQC3 1192 aaKnown RBP16.51■□□□□ 0.23
FGD3-204ENST00000467786 SENP3-EIF4A1A0A087X0R7 540 aa16.49■□□□□ 0.23
FGD3-204ENST00000467786 KNSTRNQ9Y448 316 aa16.49■□□□□ 0.23
FGD3-204ENST00000467786 CECR2Q9BXF3 1484 aa16.47■□□□□ 0.23
FGD3-204ENST00000467786 BAZ1BQ9UIG0 1483 aaKnown RBP16.46■□□□□ 0.23
FGD3-204ENST00000467786 RGS3P49796 1198 aa16.45■□□□□ 0.22
FGD3-204ENST00000467786 STAG3Q9UJ98 1225 aa16.44■□□□□ 0.22
FGD3-204ENST00000467786 RGL3Q3MIN7 710 aa16.43■□□□□ 0.22
FGD3-204ENST00000467786 NCLP19338 710 aaKnown RBP16.43■□□□□ 0.22
FGD3-204ENST00000467786 CFDP1Q9UEE9 299 aaPredicted RBP16.43■□□□□ 0.22
FGD3-204ENST00000467786 CFAP53Q96M91 514 aa16.43■□□□□ 0.22
FGD3-204ENST00000467786 PLEKHD1A6NEE1 506 aa16.42■□□□□ 0.22
FGD3-204ENST00000467786 NAP1L5Q96NT1 182 aaPredicted RBP16.41■□□□□ 0.22
FGD3-204ENST00000467786 HSPA5P11021 654 aaKnown RBP16.41■□□□□ 0.22
FGD3-204ENST00000467786 RAB3GAP2Q9H2M9 1393 aa16.39■□□□□ 0.21
FGD3-204ENST00000467786 KANK4Q5T7N3 995 aaPredicted RBP16.39■□□□□ 0.21
FGD3-204ENST00000467786 PPP1R15AO75807 674 aaPredicted RBP16.38■□□□□ 0.21
FGD3-204ENST00000467786 FTSJ3Q8IY81 847 aaKnown RBP16.38■□□□□ 0.21
FGD3-204ENST00000467786 TCERG1O14776 1098 aaKnown RBP16.37■□□□□ 0.21
FGD3-204ENST00000467786 TNNT2P45379 298 aaPredicted RBP16.37■□□□□ 0.21
FGD3-204ENST00000467786 L1TD1Q5T7N2 865 aaKnown RBP16.37■□□□□ 0.21
FGD3-204ENST00000467786 CCDC88BA6NC98 1476 aa16.37■□□□□ 0.21
FGD3-204ENST00000467786 CHMP7Q8WUX9 453 aaPredicted RBP16.36■□□□□ 0.21
FGD3-204ENST00000467786 ESF1Q9H501 851 aaKnown RBP16.35■□□□□ 0.21
FGD3-204ENST00000467786 PTMAP06454 111 aaKnown RBP16.34■□□□□ 0.21
FGD3-204ENST00000467786 MS4A1P11836 297 aa16.34■□□□□ 0.21
FGD3-204ENST00000467786 CARMIL1Q5VZK9 1371 aa16.33■□□□□ 0.21
FGD3-204ENST00000467786 IPO9Q96P70 1041 aaKnown RBP16.33■□□□□ 0.2
FGD3-204ENST00000467786 ARHGAP35Q9NRY4 1499 aa16.32■□□□□ 0.2
FGD3-204ENST00000467786 MROH2BQ7Z745 1585 aa16.31■□□□□ 0.2
FGD3-204ENST00000467786 NPM1P06748 294 aaKnown RBP eCLIP16.31■□□□□ 0.2
FGD3-204ENST00000467786 ABCC8Q09428 1581 aa16.31■□□□□ 0.2
FGD3-204ENST00000467786 FRAT1Q92837 279 aaPredicted RBP16.3■□□□□ 0.2
FGD3-204ENST00000467786 CASC1Q6TDU7 716 aa16.3■□□□□ 0.2
FGD3-204ENST00000467786 CHMP4BQ9H444 224 aaKnown RBP16.3■□□□□ 0.2
FGD3-204ENST00000467786 CC2D1BQ5T0F9 858 aaKnown RBP16.3■□□□□ 0.2
FGD3-204ENST00000467786 RCAN3Q9UKA8 241 aa16.29■□□□□ 0.2
FGD3-204ENST00000467786 TMF1P82094 1093 aa16.28■□□□□ 0.2
FGD3-204ENST00000467786 NEUROD2Q15784 382 aa16.28■□□□□ 0.2
FGD3-204ENST00000467786 NUDCQ9Y266 331 aa16.28■□□□□ 0.2
FGD3-204ENST00000467786 DNTTIP2Q5QJE6 756 aaKnown RBP16.28■□□□□ 0.2
FGD3-204ENST00000467786 DHX57Q6P158 1386 aaKnown RBP16.28■□□□□ 0.2
FGD3-204ENST00000467786 HSP90AB1P08238 724 aaKnown RBP16.26■□□□□ 0.19
FGD3-204ENST00000467786 CUX2O14529 1486 aa16.25■□□□□ 0.19
FGD3-204ENST00000467786 MAPK8IP3Q9UPT6 1336 aa16.25■□□□□ 0.19
FGD3-204ENST00000467786 HSCBQ8IWL3 235 aa16.25■□□□□ 0.19
FGD3-204ENST00000467786 RALBP1Q15311 655 aa16.24■□□□□ 0.19
FGD3-204ENST00000467786 DCAF11Q8TEB1 546 aa16.24■□□□□ 0.19
FGD3-204ENST00000467786 KTN1Q86UP2 1357 aaKnown RBP16.23■□□□□ 0.19
FGD3-204ENST00000467786 FANCIQ9NVI1 1328 aa16.23■□□□□ 0.19
FGD3-204ENST00000467786 USP35Q9P2H5 1018 aa16.22■□□□□ 0.19
FGD3-204ENST00000467786 PDE3BQ13370 1112 aa16.19■□□□□ 0.18
FGD3-204ENST00000467786 MPHOSPH9Q99550 1183 aa16.19■□□□□ 0.18
FGD3-204ENST00000467786 FMN1Q68DA7 1419 aa16.19■□□□□ 0.18
FGD3-204ENST00000467786 KCNH8Q96L42 1107 aa16.19■□□□□ 0.18
FGD3-204ENST00000467786 MSNP26038 577 aaKnown RBP16.16■□□□□ 0.18
FGD3-204ENST00000467786 PNNQ9H307 717 aaKnown RBP16.15■□□□□ 0.18
FGD3-204ENST00000467786 PKD2Q13563 968 aa16.15■□□□□ 0.18
FGD3-204ENST00000467786 CFAP44Q96MT7 982 aa16.15■□□□□ 0.18
FGD3-204ENST00000467786 PTMSP20962 102 aa16.14■□□□□ 0.17
FGD3-204ENST00000467786 L3MBTL2Q969R5 705 aa16.13■□□□□ 0.17
FGD3-204ENST00000467786 ZRSR1Q15695 479 aaKnown RBP16.13■□□□□ 0.17
FGD3-204ENST00000467786 ARID4BQ4LE39 1312 aaPredicted RBP16.13■□□□□ 0.17
FGD3-204ENST00000467786 ROCK2O75116 1388 aaKnown RBP16.12■□□□□ 0.17
FGD3-204ENST00000467786 FOXD1Q16676 465 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms