RNA–Protein interactions for RNA: ENST00000467716.1

C1GALT1-206, Transcript of core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1, humanhuman

TSL 5

Gene C1GALT1, Length 458 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1GALT1-206ENST00000467716 NPM1P06748 294 aaKnown RBP eCLIP29.88■■■□□ 2.37
C1GALT1-206ENST00000467716 KIF27Q86VH2 1401 aa29.88■■■□□ 2.37
C1GALT1-206ENST00000467716 IGF1RP08069 1367 aa29.85■■■□□ 2.37
C1GALT1-206ENST00000467716 KIF13AQ9H1H9 1805 aa29.81■■■□□ 2.36
C1GALT1-206ENST00000467716 KIAA0586Q9BVV6 1533 aa29.81■■■□□ 2.36
C1GALT1-206ENST00000467716 FAM69CQ0P6D2 419 aa29.8■■■□□ 2.36
C1GALT1-206ENST00000467716 CUL7Q14999 1698 aa29.77■■■□□ 2.36
C1GALT1-206ENST00000467716 ABCC10Q5T3U5 1492 aa29.74■■■□□ 2.35
C1GALT1-206ENST00000467716 ADCY10Q96PN6 1610 aa29.73■■■□□ 2.35
C1GALT1-206ENST00000467716 MAPKBP1O60336 1514 aa29.71■■■□□ 2.35
C1GALT1-206ENST00000467716 TTBK1Q5TCY1 1321 aaPredicted RBP29.71■■■□□ 2.35
C1GALT1-206ENST00000467716 CARMIL1Q5VZK9 1371 aa29.68■■■□□ 2.34
C1GALT1-206ENST00000467716 DIP2BQ9P265 1576 aa29.64■■■□□ 2.34
C1GALT1-206ENST00000467716 PTPRGP23470 1445 aa29.62■■■□□ 2.33
C1GALT1-206ENST00000467716 CARMIL2Q6F5E8 1435 aa29.57■■■□□ 2.32
C1GALT1-206ENST00000467716 TNIKQ9UKE5 1360 aa29.53■■■□□ 2.32
C1GALT1-206ENST00000467716 IQGAP2Q13576 1575 aa29.5■■■□□ 2.31
C1GALT1-206ENST00000467716 KDM6BO15054 1643 aa29.47■■■□□ 2.31
C1GALT1-206ENST00000467716 TSPOAP1O95153 1857 aa29.46■■■□□ 2.31
C1GALT1-206ENST00000467716 ABCC2Q92887 1545 aa29.45■■■□□ 2.3
C1GALT1-206ENST00000467716 ASXL2Q76L83 1435 aa29.39■■■□□ 2.3
C1GALT1-206ENST00000467716 RAPGEF2Q9Y4G8 1499 aa29.37■■■□□ 2.29
C1GALT1-206ENST00000467716 UACAQ9BZF9 1416 aa29.37■■■□□ 2.29
C1GALT1-206ENST00000467716 DISP1Q96F81 1524 aa29.36■■■□□ 2.29
C1GALT1-206ENST00000467716 PLB1Q6P1J6 1458 aa29.36■■■□□ 2.29
C1GALT1-206ENST00000467716 UHRF1BP1LA0JNW5 1464 aa29.34■■■□□ 2.29
C1GALT1-206ENST00000467716 CHIC1Q5VXU3 224 aa29.3■■■□□ 2.28
C1GALT1-206ENST00000467716 UGGT2Q9NYU1 1516 aa29.29■■■□□ 2.28
C1GALT1-206ENST00000467716 KDM4FA0A1W2PPD8 638 aa29.26■■■□□ 2.27
C1GALT1-206ENST00000467716 EEA1Q15075 1411 aa29.26■■■□□ 2.27
C1GALT1-206ENST00000467716 GLI2P10070 1586 aa29.25■■■□□ 2.27
C1GALT1-206ENST00000467716 KIAA0556O60303 1618 aa29.23■■■□□ 2.27
C1GALT1-206ENST00000467716 KDM5BQ9UGL1 1544 aa29.21■■■□□ 2.27
C1GALT1-206ENST00000467716 EPRSP07814 1512 aaKnown RBP29.19■■■□□ 2.26
C1GALT1-206ENST00000467716 PPRC1Q5VV67 1664 aaKnown RBP29.18■■■□□ 2.26
C1GALT1-206ENST00000467716 ZCCHC11Q5TAX3 1644 aaKnown RBP29.16■■■□□ 2.26
C1GALT1-206ENST00000467716 CSRNP3Q8WYN3 585 aa29.12■■■□□ 2.25
C1GALT1-206ENST00000467716 PRXQ9BXM0 1461 aa29.1■■■□□ 2.25
C1GALT1-206ENST00000467716 TEX14Q8IWB6 1497 aa29.09■■■□□ 2.25
C1GALT1-206ENST00000467716 CTTNBP2Q8WZ74 1663 aa29.09■■■□□ 2.25
C1GALT1-206ENST00000467716 GOLGA3Q08378 1498 aa29.08■■■□□ 2.25
C1GALT1-206ENST00000467716 MAP3K4Q9Y6R4 1608 aa29.08■■■□□ 2.25
C1GALT1-206ENST00000467716 WDR7Q9Y4E6 1490 aa29.06■■■□□ 2.24
C1GALT1-206ENST00000467716 COL17A1Q9UMD9 1497 aaPredicted RBP29.05■■■□□ 2.24
C1GALT1-206ENST00000467716 ADGRL1O94910 1474 aa29■■■□□ 2.23
C1GALT1-206ENST00000467716 KCNH8Q96L42 1107 aa29■■■□□ 2.23
C1GALT1-206ENST00000467716 FAM9AQ8IZU1 332 aaPredicted RBP28.99■■■□□ 2.23
C1GALT1-206ENST00000467716 ABCA8O94911 1581 aa28.96■■■□□ 2.23
C1GALT1-206ENST00000467716 CD109Q6YHK3 1445 aa28.93■■■□□ 2.22
C1GALT1-206ENST00000467716 ARID3CA6NKF2 412 aa28.91■■■□□ 2.22
C1GALT1-206ENST00000467716 P3H3Q8IVL6 736 aa28.91■■■□□ 2.22
C1GALT1-206ENST00000467716 KIF21BO75037 1637 aa28.89■■■□□ 2.22
C1GALT1-206ENST00000467716 MAGI3Q5TCQ9 1506 aa28.85■■■□□ 2.21
C1GALT1-206ENST00000467716 CFAP43Q8NDM7 1665 aa28.84■■■□□ 2.21
C1GALT1-206ENST00000467716 ATP10BO94823 1461 aa28.75■■■□□ 2.19
C1GALT1-206ENST00000467716 RANGAP1P46060 587 aaPredicted RBP28.72■■■□□ 2.19
C1GALT1-206ENST00000467716 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.71■■■□□ 2.19
C1GALT1-206ENST00000467716 HNRNPUL2Q1KMD3 747 aaKnown RBP28.71■■■□□ 2.19
C1GALT1-206ENST00000467716 SAMD9Q5K651 1589 aa28.67■■■□□ 2.18
C1GALT1-206ENST00000467716 UBTFP17480 764 aaKnown RBP28.65■■■□□ 2.18
C1GALT1-206ENST00000467716 HECW2Q9P2P5 1572 aa28.65■■■□□ 2.18
C1GALT1-206ENST00000467716 RAPGEF6Q8TEU7 1601 aa28.63■■■□□ 2.17
C1GALT1-206ENST00000467716 ARAP3Q8WWN8 1544 aa28.63■■■□□ 2.17
C1GALT1-206ENST00000467716 ABCA9Q8IUA7 1624 aa28.59■■■□□ 2.17
C1GALT1-206ENST00000467716 ILDR1Q86SU0 546 aaPredicted RBP28.59■■■□□ 2.17
C1GALT1-206ENST00000467716 EHMT2Q96KQ7 1210 aa28.57■■■□□ 2.16
C1GALT1-206ENST00000467716 FHOD3Q2V2M9 1422 aa28.57■■■□□ 2.16
C1GALT1-206ENST00000467716 PHLDB1Q86UU1 1377 aa28.56■■■□□ 2.16
C1GALT1-206ENST00000467716 RAPGEF3O95398 923 aa28.55■■■□□ 2.16
C1GALT1-206ENST00000467716 NUP153P49790 1475 aaKnown RBP28.53■■■□□ 2.16
C1GALT1-206ENST00000467716 EFCAB5A4FU69 1503 aa28.52■■■□□ 2.16
C1GALT1-206ENST00000467716 NEO1Q92859 1461 aa28.5■■■□□ 2.15
C1GALT1-206ENST00000467716 PLEKHD1A6NEE1 506 aa28.46■■■□□ 2.15
C1GALT1-206ENST00000467716 ARID4BQ4LE39 1312 aaPredicted RBP28.43■■■□□ 2.14
C1GALT1-206ENST00000467716 FRMPD1Q5SYB0 1578 aa28.38■■■□□ 2.13
C1GALT1-206ENST00000467716 PTPRMP28827 1452 aa28.36■■■□□ 2.13
C1GALT1-206ENST00000467716 DENND4BO75064 1496 aaPredicted RBP28.34■■■□□ 2.13
C1GALT1-206ENST00000467716 ADAMTSL3P82987 1691 aa28.33■■■□□ 2.13
C1GALT1-206ENST00000467716 AKNAQ7Z591 1439 aa28.33■■■□□ 2.13
C1GALT1-206ENST00000467716 FANCAO15360 1455 aa28.32■■■□□ 2.12
C1GALT1-206ENST00000467716 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.3■■■□□ 2.126e-6■■□□□ 13.3
C1GALT1-206ENST00000467716 ATP1B4Q9UN42 357 aaPredicted RBP28.3■■■□□ 2.12
C1GALT1-206ENST00000467716 CDK13Q14004 1512 aaKnown RBP28.28■■■□□ 2.12
C1GALT1-206ENST00000467716 ARHGAP35Q9NRY4 1499 aa28.28■■■□□ 2.12
C1GALT1-206ENST00000467716 CFAP74Q9C0B2 1584 aa28.28■■■□□ 2.12
C1GALT1-206ENST00000467716 ARHGEF40Q8TER5 1519 aa28.28■■■□□ 2.12
C1GALT1-206ENST00000467716 BCORL1Q5H9F3 1711 aa28.27■■■□□ 2.12
C1GALT1-206ENST00000467716 TTC37Q6PGP7 1564 aa28.27■■■□□ 2.12
C1GALT1-206ENST00000467716 FMN1Q68DA7 1419 aa28.26■■■□□ 2.11
C1GALT1-206ENST00000467716 MADDQ8WXG6 1647 aa28.25■■■□□ 2.11
C1GALT1-206ENST00000467716 RICTORQ6R327 1708 aa28.23■■■□□ 2.11
C1GALT1-206ENST00000467716 PLPPR3Q6T4P5 718 aa28.2■■■□□ 2.1
C1GALT1-206ENST00000467716 CLIP1P30622 1438 aa28.19■■■□□ 2.1
C1GALT1-206ENST00000467716 ZFYVE16Q7Z3T8 1539 aa28.17■■■□□ 2.1
C1GALT1-206ENST00000467716 POGZQ7Z3K3 1410 aa28.16■■■□□ 2.1
C1GALT1-206ENST00000467716 YEATS2Q9ULM3 1422 aa28.16■■■□□ 2.1
C1GALT1-206ENST00000467716 RIMS1Q86UR5 1692 aaKnown RBP28.15■■■□□ 2.1
C1GALT1-206ENST00000467716 ZMYM4Q5VZL5 1548 aa28.14■■■□□ 2.1
C1GALT1-206ENST00000467716 SCAPERQ9BY12 1400 aa28.14■■■□□ 2.1
C1GALT1-206ENST00000467716 PCF11O94913 1555 aaKnown RBP28.13■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms