RNA–Protein interactions for RNA: ENST00000467661.5

NELFA-213, Transcript of negative elongation factor complex member A, humanhuman

TSL 1 (best)

Gene NELFA, Length 1,707 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFA-213ENST00000467661 MAP3K1Q13233 1512 aa26.55■■□□□ 1.84
NELFA-213ENST00000467661 EIF4G3O43432 1585 aaKnown RBP26.54■■□□□ 1.84
NELFA-213ENST00000467661 HNRNPUL2Q1KMD3 747 aaKnown RBP26.51■■□□□ 1.83
NELFA-213ENST00000467661 EFCAB5A4FU69 1503 aa26.51■■□□□ 1.83
NELFA-213ENST00000467661 TDRD9Q8NDG6 1382 aaKnown RBP26.51■■□□□ 1.83
NELFA-213ENST00000467661 FHAD1B1AJZ9 1412 aa26.5■■□□□ 1.83
NELFA-213ENST00000467661 AQRO60306 1485 aaKnown RBP eCLIP26.5■■□□□ 1.838e-8■■■■□ 20.1
NELFA-213ENST00000467661 KANK4Q5T7N3 995 aaPredicted RBP26.48■■□□□ 1.83
NELFA-213ENST00000467661 TIAM1Q13009 1591 aa26.46■■□□□ 1.83
NELFA-213ENST00000467661 GAPVD1Q14C86 1478 aa26.46■■□□□ 1.83
NELFA-213ENST00000467661 RRBP1Q9P2E9 1410 aaKnown RBP26.45■■□□□ 1.82
NELFA-213ENST00000467661 PBRM1Q86U86 1689 aa26.43■■□□□ 1.82
NELFA-213ENST00000467661 CFAP43Q8NDM7 1665 aa26.39■■□□□ 1.82
NELFA-213ENST00000467661 PCF11O94913 1555 aaKnown RBP26.36■■□□□ 1.81
NELFA-213ENST00000467661 GRIN2BQ13224 1484 aa26.35■■□□□ 1.81
NELFA-213ENST00000467661 FYCO1Q9BQS8 1478 aa26.33■■□□□ 1.81
NELFA-213ENST00000467661 LRRC9Q6ZRR7 1453 aa26.32■■□□□ 1.8
NELFA-213ENST00000467661 CCNB3Q8WWL7 1395 aa26.31■■□□□ 1.8
NELFA-213ENST00000467661 FHOD3Q2V2M9 1422 aa26.29■■□□□ 1.8
NELFA-213ENST00000467661 CASKIN1Q8WXD9 1431 aa26.27■■□□□ 1.8
NELFA-213ENST00000467661 SAMD9Q5K651 1589 aa26.27■■□□□ 1.8
NELFA-213ENST00000467661 FMN1Q68DA7 1419 aa26.26■■□□□ 1.79
NELFA-213ENST00000467661 SNAPC4Q5SXM2 1469 aa26.25■■□□□ 1.79
NELFA-213ENST00000467661 MAGI1Q96QZ7 1491 aaPredicted RBP26.24■■□□□ 1.79
NELFA-213ENST00000467661 P3H3Q8IVL6 736 aa26.24■■□□□ 1.79
NELFA-213ENST00000467661 CLSPNQ9HAW4 1339 aa26.21■■□□□ 1.79
NELFA-213ENST00000467661 ADAMTS12P58397 1594 aa26.2■■□□□ 1.78
NELFA-213ENST00000467661 CHD1O14646 1710 aa26.15■■□□□ 1.78
NELFA-213ENST00000467661 SYNJ2O15056 1496 aa26.13■■□□□ 1.77
NELFA-213ENST00000467661 ATP1B4Q9UN42 357 aaPredicted RBP26.11■■□□□ 1.77
NELFA-213ENST00000467661 DHX57Q6P158 1386 aaKnown RBP26.1■■□□□ 1.77
NELFA-213ENST00000467661 PHLDB1Q86UU1 1377 aa26.09■■□□□ 1.77
NELFA-213ENST00000467661 IQGAP2Q13576 1575 aa26.06■■□□□ 1.76
NELFA-213ENST00000467661 CHMP7Q8WUX9 453 aaPredicted RBP26.05■■□□□ 1.76
NELFA-213ENST00000467661 FBLN2P98095 1184 aa26.04■■□□□ 1.76
NELFA-213ENST00000467661 ZNF316A6NFI3 1004 aaPredicted RBP26.03■■□□□ 1.76
NELFA-213ENST00000467661 GRIN2AQ12879 1464 aa26.03■■□□□ 1.76
NELFA-213ENST00000467661 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.01■■□□□ 1.75
NELFA-213ENST00000467661 DIEXFQ68CQ4 756 aaKnown RBP26■■□□□ 1.75
NELFA-213ENST00000467661 LRRIQ1Q96JM4 1722 aa25.99■■□□□ 1.75
NELFA-213ENST00000467661 ITGAEP38570 1179 aa25.97■■□□□ 1.75
NELFA-213ENST00000467661 MTUS2Q5JR59 1369 aa25.96■■□□□ 1.75
NELFA-213ENST00000467661 CCDC18Q5T9S5 1454 aa25.95■■□□□ 1.75
NELFA-213ENST00000467661 EHBP1L1Q8N3D4 1523 aa25.94■■□□□ 1.74
NELFA-213ENST00000467661 HECW1Q76N89 1606 aa25.93■■□□□ 1.74
NELFA-213ENST00000467661 SETD5Q9C0A6 1442 aa25.93■■□□□ 1.74
NELFA-213ENST00000467661 RAB3GAP2Q9H2M9 1393 aa25.93■■□□□ 1.74
NELFA-213ENST00000467661 UGGT2Q9NYU1 1516 aa25.92■■□□□ 1.74
NELFA-213ENST00000467661 FAM50AQ14320 339 aaKnown RBP25.92■■□□□ 1.74
NELFA-213ENST00000467661 SUPT6HQ7KZ85 1726 aaKnown RBP25.92■■□□□ 1.74
NELFA-213ENST00000467661 CEP170Q5SW79 1584 aa25.91■■□□□ 1.74
NELFA-213ENST00000467661 NUP160Q12769 1436 aa25.88■■□□□ 1.73
NELFA-213ENST00000467661 FGD6Q6ZV73 1430 aa25.88■■□□□ 1.73
NELFA-213ENST00000467661 OSCARQ8IYS5 282 aa25.88■■□□□ 1.73
NELFA-213ENST00000467661 KIAA0586Q9BVV6 1533 aa25.86■■□□□ 1.73
NELFA-213ENST00000467661 NCOA2Q15596 1464 aa25.83■■□□□ 1.73
NELFA-213ENST00000467661 CLASP1Q7Z460 1538 aa25.82■■□□□ 1.72
NELFA-213ENST00000467661 MYOM3Q5VTT5 1437 aa25.81■■□□□ 1.72
NELFA-213ENST00000467661 KIAA0556O60303 1618 aa25.78■■□□□ 1.72
NELFA-213ENST00000467661 ARHGEF11O15085 1522 aa25.78■■□□□ 1.72
NELFA-213ENST00000467661 EPRSP07814 1512 aaKnown RBP25.76■■□□□ 1.71
NELFA-213ENST00000467661 MAPKBP1O60336 1514 aa25.76■■□□□ 1.71
NELFA-213ENST00000467661 MAGI3Q5TCQ9 1506 aa25.73■■□□□ 1.71
NELFA-213ENST00000467661 DISP1Q96F81 1524 aa25.71■■□□□ 1.71
NELFA-213ENST00000467661 PTPN23Q9H3S7 1636 aa25.71■■□□□ 1.71
NELFA-213ENST00000467661 SHROOM2Q13796 1616 aa25.69■■□□□ 1.7
NELFA-213ENST00000467661 CDK13Q14004 1512 aaKnown RBP25.65■■□□□ 1.7
NELFA-213ENST00000467661 TCOF1Q13428 1488 aaKnown RBP25.65■■□□□ 1.7
NELFA-213ENST00000467661 RAPGEF6Q8TEU7 1601 aa25.64■■□□□ 1.7
NELFA-213ENST00000467661 HFM1A2PYH4 1435 aa25.64■■□□□ 1.7
NELFA-213ENST00000467661 JPH4Q96JJ6 628 aa25.62■■□□□ 1.69
NELFA-213ENST00000467661 MIA2Q96PC5 1412 aa25.6■■□□□ 1.69
NELFA-213ENST00000467661 PTPRKQ15262 1439 aa25.57■■□□□ 1.68
NELFA-213ENST00000467661 TIMELESSQ9UNS1 1208 aa25.55■■□□□ 1.68
NELFA-213ENST00000467661 NUP153P49790 1475 aaKnown RBP25.55■■□□□ 1.68
NELFA-213ENST00000467661 CARMIL2Q6F5E8 1435 aa25.54■■□□□ 1.68
NELFA-213ENST00000467661 ERCC6L2Q5T890 1561 aa25.53■■□□□ 1.68
NELFA-213ENST00000467661 NAIPQ13075 1403 aa25.53■■□□□ 1.68
NELFA-213ENST00000467661 PRG4Q92954 1404 aaPredicted RBP25.53■■□□□ 1.68
NELFA-213ENST00000467661 GCC2Q8IWJ2 1684 aa25.53■■□□□ 1.68
NELFA-213ENST00000467661 CENPBP07199 599 aaPredicted RBP25.52■■□□□ 1.68
NELFA-213ENST00000467661 UACAQ9BZF9 1416 aa25.52■■□□□ 1.68
NELFA-213ENST00000467661 DNAJC5Q9H3Z4 198 aa25.51■■□□□ 1.68
NELFA-213ENST00000467661 AKNAQ7Z591 1439 aa25.51■■□□□ 1.67
NELFA-213ENST00000467661 CDK11AQ9UQ88 783 aaPredicted RBP25.51■■□□□ 1.67
NELFA-213ENST00000467661 RIMBP3CA6NJZ7 1639 aa25.48■■□□□ 1.67
NELFA-213ENST00000467661 RIMBP3BA6NNM3 1639 aa25.48■■□□□ 1.67
NELFA-213ENST00000467661 RIMBP3Q9UFD9 1639 aa25.48■■□□□ 1.67
NELFA-213ENST00000467661 ACIN1Q9UKV3 1341 aaKnown RBP25.43■■□□□ 1.66
NELFA-213ENST00000467661 ARID3CA6NKF2 412 aa25.42■■□□□ 1.66
NELFA-213ENST00000467661 MIER1Q8N108 512 aa25.42■■□□□ 1.66
NELFA-213ENST00000467661 SIN3AQ96ST3 1273 aa25.41■■□□□ 1.66
NELFA-213ENST00000467661 NEUROD1Q13562 356 aa25.4■■□□□ 1.66
NELFA-213ENST00000467661 TROQ12816 1431 aaPredicted RBP25.4■■□□□ 1.66
NELFA-213ENST00000467661 ITSN2Q9NZM3 1697 aa25.4■■□□□ 1.66
NELFA-213ENST00000467661 ADCY10Q96PN6 1610 aa25.4■■□□□ 1.66
NELFA-213ENST00000467661 PLB1Q6P1J6 1458 aa25.38■■□□□ 1.65
NELFA-213ENST00000467661 DNMT1P26358 1616 aaKnown RBP25.37■■□□□ 1.65
NELFA-213ENST00000467661 ABCA8O94911 1581 aa25.33■■□□□ 1.65
NELFA-213ENST00000467661 DAPK1P53355 1430 aa25.33■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms