RNA–Protein interactions for RNA: ENST00000467539.1

CGREF1-208, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

TSL 4

Gene CGREF1, Length 548 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-208ENST00000467539 PRG4Q92954 1404 aaPredicted RBP30.94■■■□□ 2.54
CGREF1-208ENST00000467539 KIAA0586Q9BVV6 1533 aa30.91■■■□□ 2.54
CGREF1-208ENST00000467539 TRHP20396 242 aaPredicted RBP30.89■■■□□ 2.54
CGREF1-208ENST00000467539 RUSC2Q8N2Y8 1516 aa30.86■■■□□ 2.53
CGREF1-208ENST00000467539 RAPGEF2Q9Y4G8 1499 aa30.75■■■□□ 2.51
CGREF1-208ENST00000467539 CARMIL2Q6F5E8 1435 aa30.6■■■□□ 2.49
CGREF1-208ENST00000467539 IQGAP2Q13576 1575 aa30.58■■■□□ 2.49
CGREF1-208ENST00000467539 NPM1P06748 294 aaKnown RBP eCLIP30.58■■■□□ 2.49
CGREF1-208ENST00000467539 PTPRGP23470 1445 aa30.56■■■□□ 2.48
CGREF1-208ENST00000467539 CSRNP3Q8WYN3 585 aa30.56■■■□□ 2.48
CGREF1-208ENST00000467539 PRXQ9BXM0 1461 aa30.56■■■□□ 2.48
CGREF1-208ENST00000467539 TNIKQ9UKE5 1360 aa30.54■■■□□ 2.48
CGREF1-208ENST00000467539 UGGT2Q9NYU1 1516 aa30.47■■■□□ 2.47
CGREF1-208ENST00000467539 TTBK1Q5TCY1 1321 aaPredicted RBP30.47■■■□□ 2.47
CGREF1-208ENST00000467539 DISP1Q96F81 1524 aa30.46■■■□□ 2.47
CGREF1-208ENST00000467539 EEA1Q15075 1411 aa30.42■■■□□ 2.46
CGREF1-208ENST00000467539 CHIC1Q5VXU3 224 aa30.42■■■□□ 2.46
CGREF1-208ENST00000467539 ADCY10Q96PN6 1610 aa30.41■■■□□ 2.46
CGREF1-208ENST00000467539 MAPKBP1O60336 1514 aa30.32■■■□□ 2.44
CGREF1-208ENST00000467539 FAM69CQ0P6D2 419 aa30.32■■■□□ 2.44
CGREF1-208ENST00000467539 FAM9AQ8IZU1 332 aaPredicted RBP30.32■■■□□ 2.44
CGREF1-208ENST00000467539 UACAQ9BZF9 1416 aa30.31■■■□□ 2.44
CGREF1-208ENST00000467539 CTTNBP2Q8WZ74 1663 aa30.3■■■□□ 2.44
CGREF1-208ENST00000467539 UHRF1BP1LA0JNW5 1464 aa30.3■■■□□ 2.44
CGREF1-208ENST00000467539 ABCC10Q5T3U5 1492 aa30.29■■■□□ 2.44
CGREF1-208ENST00000467539 GOLGA3Q08378 1498 aa30.28■■■□□ 2.44
CGREF1-208ENST00000467539 KIAA0556O60303 1618 aa30.28■■■□□ 2.44
CGREF1-208ENST00000467539 ABCC2Q92887 1545 aa30.27■■■□□ 2.44
CGREF1-208ENST00000467539 KIF13AQ9H1H9 1805 aa30.21■■■□□ 2.43
CGREF1-208ENST00000467539 KDM5BQ9UGL1 1544 aa30.14■■■□□ 2.42
CGREF1-208ENST00000467539 PLB1Q6P1J6 1458 aa30.13■■■□□ 2.41
CGREF1-208ENST00000467539 P3H3Q8IVL6 736 aa30.13■■■□□ 2.41
CGREF1-208ENST00000467539 ASXL2Q76L83 1435 aa30.13■■■□□ 2.41
CGREF1-208ENST00000467539 DIP2BQ9P265 1576 aa30.12■■■□□ 2.41
CGREF1-208ENST00000467539 KIF21BO75037 1637 aa30.04■■■□□ 2.4
CGREF1-208ENST00000467539 ABCA8O94911 1581 aa30.03■■■□□ 2.4
CGREF1-208ENST00000467539 RANGAP1P46060 587 aaPredicted RBP29.99■■■□□ 2.39
CGREF1-208ENST00000467539 ZCCHC11Q5TAX3 1644 aaKnown RBP29.97■■■□□ 2.39
CGREF1-208ENST00000467539 UBTFP17480 764 aaKnown RBP29.97■■■□□ 2.39
CGREF1-208ENST00000467539 GLI2P10070 1586 aa29.97■■■□□ 2.39
CGREF1-208ENST00000467539 SAMD9Q5K651 1589 aa29.97■■■□□ 2.39
CGREF1-208ENST00000467539 EPRSP07814 1512 aaKnown RBP29.93■■■□□ 2.38
CGREF1-208ENST00000467539 EHMT2Q96KQ7 1210 aa29.91■■■□□ 2.38
CGREF1-208ENST00000467539 WDR7Q9Y4E6 1490 aa29.88■■■□□ 2.37
CGREF1-208ENST00000467539 KCNH8Q96L42 1107 aa29.86■■■□□ 2.37
CGREF1-208ENST00000467539 TSPOAP1O95153 1857 aa29.86■■■□□ 2.37
CGREF1-208ENST00000467539 ATP10BO94823 1461 aa29.86■■■□□ 2.37
CGREF1-208ENST00000467539 FHOD3Q2V2M9 1422 aa29.83■■■□□ 2.37
CGREF1-208ENST00000467539 ARID3CA6NKF2 412 aa29.82■■■□□ 2.36
CGREF1-208ENST00000467539 EFCAB5A4FU69 1503 aa29.79■■■□□ 2.36
CGREF1-208ENST00000467539 RAPGEF6Q8TEU7 1601 aa29.76■■■□□ 2.35
CGREF1-208ENST00000467539 MAP3K4Q9Y6R4 1608 aa29.75■■■□□ 2.35
CGREF1-208ENST00000467539 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.74■■■□□ 2.35
CGREF1-208ENST00000467539 HNRNPUL2Q1KMD3 747 aaKnown RBP29.74■■■□□ 2.35
CGREF1-208ENST00000467539 KDM6BO15054 1643 aa29.74■■■□□ 2.35
CGREF1-208ENST00000467539 PPRC1Q5VV67 1664 aaKnown RBP29.73■■■□□ 2.35
CGREF1-208ENST00000467539 CD109Q6YHK3 1445 aa29.71■■■□□ 2.35
CGREF1-208ENST00000467539 NUP153P49790 1475 aaKnown RBP29.7■■■□□ 2.35
CGREF1-208ENST00000467539 TEX14Q8IWB6 1497 aa29.7■■■□□ 2.35
CGREF1-208ENST00000467539 PLEKHD1A6NEE1 506 aa29.65■■■□□ 2.34
CGREF1-208ENST00000467539 MAGI3Q5TCQ9 1506 aa29.65■■■□□ 2.34
CGREF1-208ENST00000467539 ARHGAP35Q9NRY4 1499 aa29.64■■■□□ 2.34
CGREF1-208ENST00000467539 COL17A1Q9UMD9 1497 aaPredicted RBP29.62■■■□□ 2.33
CGREF1-208ENST00000467539 CFAP43Q8NDM7 1665 aa29.61■■■□□ 2.33
CGREF1-208ENST00000467539 AEBP2Q6ZN18 517 aaPredicted RBP29.6■■■□□ 2.33
CGREF1-208ENST00000467539 FMN1Q68DA7 1419 aa29.6■■■□□ 2.33
CGREF1-208ENST00000467539 ATP1B4Q9UN42 357 aaPredicted RBP29.54■■■□□ 2.32
CGREF1-208ENST00000467539 ABCA9Q8IUA7 1624 aa29.5■■■□□ 2.31
CGREF1-208ENST00000467539 PHLDB1Q86UU1 1377 aa29.48■■■□□ 2.31
CGREF1-208ENST00000467539 CDK11AQ9UQ88 783 aaPredicted RBP29.44■■■□□ 2.3
CGREF1-208ENST00000467539 CDK13Q14004 1512 aaKnown RBP29.42■■■□□ 2.3
CGREF1-208ENST00000467539 ARAP3Q8WWN8 1544 aa29.41■■■□□ 2.3
CGREF1-208ENST00000467539 KDM4FA0A1W2PPD8 638 aa29.4■■■□□ 2.3
CGREF1-208ENST00000467539 HECW1Q76N89 1606 aa29.38■■■□□ 2.29
CGREF1-208ENST00000467539 CLIP1P30622 1438 aa29.37■■■□□ 2.29
CGREF1-208ENST00000467539 NEO1Q92859 1461 aa29.36■■■□□ 2.29
CGREF1-208ENST00000467539 CASKIN1Q8WXD9 1431 aa29.33■■■□□ 2.29
CGREF1-208ENST00000467539 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.33■■■□□ 2.29
CGREF1-208ENST00000467539 RAPGEF3O95398 923 aa29.3■■■□□ 2.28
CGREF1-208ENST00000467539 TROQ12816 1431 aaPredicted RBP29.25■■■□□ 2.27
CGREF1-208ENST00000467539 AKNAQ7Z591 1439 aa29.25■■■□□ 2.27
CGREF1-208ENST00000467539 PLCH2O75038 1416 aa29.24■■■□□ 2.27
CGREF1-208ENST00000467539 FANCAO15360 1455 aa29.23■■■□□ 2.27
CGREF1-208ENST00000467539 TTC37Q6PGP7 1564 aa29.22■■■□□ 2.27
CGREF1-208ENST00000467539 LOC105371045A0A1W2PR82 267 aa29.2■■■□□ 2.26
CGREF1-208ENST00000467539 CCDC18Q5T9S5 1454 aa29.2■■■□□ 2.26
CGREF1-208ENST00000467539 EFCAB2Q5VUJ9 269 aa29.19■■■□□ 2.26
CGREF1-208ENST00000467539 FYCO1Q9BQS8 1478 aa29.18■■■□□ 2.26
CGREF1-208ENST00000467539 PCF11O94913 1555 aaKnown RBP29.18■■■□□ 2.26
CGREF1-208ENST00000467539 LRRIQ1Q96JM4 1722 aa29.17■■■□□ 2.26
CGREF1-208ENST00000467539 DENND4BO75064 1496 aaPredicted RBP29.17■■■□□ 2.26
CGREF1-208ENST00000467539 ADGRL1O94910 1474 aa29.15■■■□□ 2.26
CGREF1-208ENST00000467539 CFAP74Q9C0B2 1584 aa29.13■■■□□ 2.25
CGREF1-208ENST00000467539 CEP162Q5TB80 1403 aa29.12■■■□□ 2.25
CGREF1-208ENST00000467539 KIF14Q15058 1648 aa29.09■■■□□ 2.25
CGREF1-208ENST00000467539 SCAPERQ9BY12 1400 aa29.08■■■□□ 2.25
CGREF1-208ENST00000467539 FRMPD1Q5SYB0 1578 aa29.07■■■□□ 2.24
CGREF1-208ENST00000467539 MYO5CQ9NQX4 1742 aa29.03■■■□□ 2.24
CGREF1-208ENST00000467539 RICTORQ6R327 1708 aa29.01■■■□□ 2.23
CGREF1-208ENST00000467539 ARHGAP5Q13017 1502 aa28.98■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms