RNA–Protein interactions for RNA: ENST00000467350.1

RERE-209, Transcript of arginine-glutamic acid dipeptide repeats, humanhuman

TSL 3

Gene RERE, Length 410 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RERE-209ENST00000467350 CEP170Q5SW79 1584 aa17.82■□□□□ 0.44
RERE-209ENST00000467350 PRG4Q92954 1404 aaPredicted RBP17.81■□□□□ 0.44
RERE-209ENST00000467350 NPM1P06748 294 aaKnown RBP eCLIP17.79■□□□□ 0.44
RERE-209ENST00000467350 CARMIL1Q5VZK9 1371 aa17.74■□□□□ 0.43
RERE-209ENST00000467350 KIAA0586Q9BVV6 1533 aa17.72■□□□□ 0.43
RERE-209ENST00000467350 ERCC6L2Q5T890 1561 aa17.72■□□□□ 0.43
RERE-209ENST00000467350 SHROOM2Q13796 1616 aa17.72■□□□□ 0.43
RERE-209ENST00000467350 CUL7Q14999 1698 aa17.64■□□□□ 0.41
RERE-209ENST00000467350 CARMIL2Q6F5E8 1435 aa17.62■□□□□ 0.41
RERE-209ENST00000467350 PTPRGP23470 1445 aa17.61■□□□□ 0.41
RERE-209ENST00000467350 RUSC2Q8N2Y8 1516 aa17.61■□□□□ 0.41
RERE-209ENST00000467350 FAM69CQ0P6D2 419 aa17.59■□□□□ 0.41
RERE-209ENST00000467350 TTBK1Q5TCY1 1321 aaPredicted RBP17.57■□□□□ 0.4
RERE-209ENST00000467350 TNIKQ9UKE5 1360 aa17.55■□□□□ 0.4
RERE-209ENST00000467350 RAPGEF2Q9Y4G8 1499 aa17.55■□□□□ 0.4
RERE-209ENST00000467350 FAM9AQ8IZU1 332 aaPredicted RBP17.51■□□□□ 0.39
RERE-209ENST00000467350 ABCC10Q5T3U5 1492 aa17.49■□□□□ 0.39
RERE-209ENST00000467350 MAPKBP1O60336 1514 aa17.47■□□□□ 0.39
RERE-209ENST00000467350 IQGAP2Q13576 1575 aa17.46■□□□□ 0.39
RERE-209ENST00000467350 UACAQ9BZF9 1416 aa17.43■□□□□ 0.38
RERE-209ENST00000467350 ADCY10Q96PN6 1610 aa17.42■□□□□ 0.38
RERE-209ENST00000467350 CSRNP3Q8WYN3 585 aa17.4■□□□□ 0.38
RERE-209ENST00000467350 ABCC2Q92887 1545 aa17.4■□□□□ 0.38
RERE-209ENST00000467350 UHRF1BP1LA0JNW5 1464 aa17.39■□□□□ 0.37
RERE-209ENST00000467350 DISP1Q96F81 1524 aa17.39■□□□□ 0.37
RERE-209ENST00000467350 PLB1Q6P1J6 1458 aa17.38■□□□□ 0.37
RERE-209ENST00000467350 UGGT2Q9NYU1 1516 aa17.38■□□□□ 0.37
RERE-209ENST00000467350 GOLGA3Q08378 1498 aa17.36■□□□□ 0.37
RERE-209ENST00000467350 ASXL2Q76L83 1435 aa17.35■□□□□ 0.37
RERE-209ENST00000467350 PRXQ9BXM0 1461 aa17.35■□□□□ 0.37
RERE-209ENST00000467350 DIP2BQ9P265 1576 aa17.32■□□□□ 0.36
RERE-209ENST00000467350 KIF13AQ9H1H9 1805 aa17.29■□□□□ 0.36
RERE-209ENST00000467350 KDM5BQ9UGL1 1544 aa17.29■□□□□ 0.36
RERE-209ENST00000467350 EEA1Q15075 1411 aa17.28■□□□□ 0.36
RERE-209ENST00000467350 KIAA0556O60303 1618 aa17.26■□□□□ 0.35
RERE-209ENST00000467350 P3H3Q8IVL6 736 aa17.24■□□□□ 0.35
RERE-209ENST00000467350 KCNH8Q96L42 1107 aa17.24■□□□□ 0.35
RERE-209ENST00000467350 GLI2P10070 1586 aa17.22■□□□□ 0.35
RERE-209ENST00000467350 EPRSP07814 1512 aaKnown RBP17.21■□□□□ 0.34
RERE-209ENST00000467350 KDM6BO15054 1643 aa17.19■□□□□ 0.34
RERE-209ENST00000467350 TEX14Q8IWB6 1497 aa17.18■□□□□ 0.34
RERE-209ENST00000467350 WDR7Q9Y4E6 1490 aa17.18■□□□□ 0.34
RERE-209ENST00000467350 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.16■□□□□ 0.34
RERE-209ENST00000467350 RANGAP1P46060 587 aaPredicted RBP17.16■□□□□ 0.34
RERE-209ENST00000467350 HNRNPUL2Q1KMD3 747 aaKnown RBP17.16■□□□□ 0.34
RERE-209ENST00000467350 CTTNBP2Q8WZ74 1663 aa17.15■□□□□ 0.34
RERE-209ENST00000467350 CD109Q6YHK3 1445 aa17.13■□□□□ 0.33
RERE-209ENST00000467350 ARID3CA6NKF2 412 aa17.13■□□□□ 0.33
RERE-209ENST00000467350 ZCCHC11Q5TAX3 1644 aaKnown RBP17.13■□□□□ 0.33
RERE-209ENST00000467350 ABCA8O94911 1581 aa17.12■□□□□ 0.33
RERE-209ENST00000467350 TSPOAP1O95153 1857 aa17.1■□□□□ 0.33
RERE-209ENST00000467350 KDM4FA0A1W2PPD8 638 aa17.1■□□□□ 0.33
RERE-209ENST00000467350 UBTFP17480 764 aaKnown RBP17.1■□□□□ 0.33
RERE-209ENST00000467350 ATP10BO94823 1461 aa17.08■□□□□ 0.32
RERE-209ENST00000467350 PLEKHD1A6NEE1 506 aa17.08■□□□□ 0.32
RERE-209ENST00000467350 MAGI3Q5TCQ9 1506 aa17.06■□□□□ 0.32
RERE-209ENST00000467350 MAP3K4Q9Y6R4 1608 aa17.05■□□□□ 0.32
RERE-209ENST00000467350 COL17A1Q9UMD9 1497 aaPredicted RBP17.05■□□□□ 0.32
RERE-209ENST00000467350 PHLDB1Q86UU1 1377 aa17.04■□□□□ 0.32
RERE-209ENST00000467350 FOXD1Q16676 465 aa17.04■□□□□ 0.32
RERE-209ENST00000467350 SAMD9Q5K651 1589 aa17■□□□□ 0.31
RERE-209ENST00000467350 EHMT2Q96KQ7 1210 aa17■□□□□ 0.31
RERE-209ENST00000467350 FHOD3Q2V2M9 1422 aa16.99■□□□□ 0.31
RERE-209ENST00000467350 PPRC1Q5VV67 1664 aaKnown RBP16.98■□□□□ 0.31
RERE-209ENST00000467350 KIF21BO75037 1637 aa16.96■□□□□ 0.31
RERE-209ENST00000467350 ATP1B4Q9UN42 357 aaPredicted RBP16.96■□□□□ 0.31
RERE-209ENST00000467350 CFAP43Q8NDM7 1665 aa16.95■□□□□ 0.3
RERE-209ENST00000467350 CDK11AQ9UQ88 783 aaPredicted RBP16.95■□□□□ 0.3
RERE-209ENST00000467350 EFCAB5A4FU69 1503 aa16.95■□□□□ 0.3
RERE-209ENST00000467350 RAPGEF6Q8TEU7 1601 aa16.94■□□□□ 0.3
RERE-209ENST00000467350 NUP153P49790 1475 aaKnown RBP16.93■□□□□ 0.3
RERE-209ENST00000467350 ARAP3Q8WWN8 1544 aa16.92■□□□□ 0.3
RERE-209ENST00000467350 FMN1Q68DA7 1419 aa16.91■□□□□ 0.3
RERE-209ENST00000467350 ADGRL1O94910 1474 aa16.91■□□□□ 0.3
RERE-209ENST00000467350 RAPGEF3O95398 923 aa16.9■□□□□ 0.3
RERE-209ENST00000467350 NEO1Q92859 1461 aa16.89■□□□□ 0.29
RERE-209ENST00000467350 ABCA9Q8IUA7 1624 aa16.86■□□□□ 0.29
RERE-209ENST00000467350 ARID4BQ4LE39 1312 aaPredicted RBP16.82■□□□□ 0.28
RERE-209ENST00000467350 EFCAB2Q5VUJ9 269 aa16.81■□□□□ 0.28
RERE-209ENST00000467350 AKNAQ7Z591 1439 aa16.8■□□□□ 0.28
RERE-209ENST00000467350 ARHGAP35Q9NRY4 1499 aa16.8■□□□□ 0.28
RERE-209ENST00000467350 FANCAO15360 1455 aa16.79■□□□□ 0.28
RERE-209ENST00000467350 DENND4BO75064 1496 aaPredicted RBP16.79■□□□□ 0.28
RERE-209ENST00000467350 PLCH2O75038 1416 aa16.77■□□□□ 0.27
RERE-209ENST00000467350 CLIP1P30622 1438 aa16.75■□□□□ 0.27
RERE-209ENST00000467350 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.75■□□□□ 0.27
RERE-209ENST00000467350 CDK13Q14004 1512 aaKnown RBP16.74■□□□□ 0.27
RERE-209ENST00000467350 SCAPERQ9BY12 1400 aa16.71■□□□□ 0.27
RERE-209ENST00000467350 HECW1Q76N89 1606 aa16.71■□□□□ 0.27
RERE-209ENST00000467350 TROQ12816 1431 aaPredicted RBP16.7■□□□□ 0.26
RERE-209ENST00000467350 POGZQ7Z3K3 1410 aa16.7■□□□□ 0.26
RERE-209ENST00000467350 MAGI2Q86UL8 1455 aa16.69■□□□□ 0.26
RERE-209ENST00000467350 CFAP74Q9C0B2 1584 aa16.68■□□□□ 0.26
RERE-209ENST00000467350 MYT1LQ9UL68 1186 aa16.68■□□□□ 0.26
RERE-209ENST00000467350 CASKIN1Q8WXD9 1431 aa16.68■□□□□ 0.26
RERE-209ENST00000467350 CCDC18Q5T9S5 1454 aa16.65■□□□□ 0.26
RERE-209ENST00000467350 TTC37Q6PGP7 1564 aa16.64■□□□□ 0.25
RERE-209ENST00000467350 PTPRMP28827 1452 aa16.63■□□□□ 0.25
RERE-209ENST00000467350 AFAP1Q8N556 730 aa16.63■□□□□ 0.25
RERE-209ENST00000467350 MLECQ14165 292 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms