RNA–Protein interactions for RNA: ENST00000467288.6

GMDS-203, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 5

Gene GMDS, Length 900 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-203ENST00000467288 CARMIL1Q5VZK9 1371 aa33.28■■■□□ 2.92
GMDS-203ENST00000467288 JPH4Q96JJ6 628 aa33.26■■■□□ 2.91
GMDS-203ENST00000467288 PRG4Q92954 1404 aaPredicted RBP33.21■■■□□ 2.91
GMDS-203ENST00000467288 KIAA0586Q9BVV6 1533 aa33.21■■■□□ 2.91
GMDS-203ENST00000467288 RAPGEF2Q9Y4G8 1499 aa33.04■■■□□ 2.88
GMDS-203ENST00000467288 IQGAP2Q13576 1575 aa32.93■■■□□ 2.86
GMDS-203ENST00000467288 AEBP2Q6ZN18 517 aaPredicted RBP32.92■■■□□ 2.86
GMDS-203ENST00000467288 PRXQ9BXM0 1461 aa32.86■■■□□ 2.85
GMDS-203ENST00000467288 CARMIL2Q6F5E8 1435 aa32.84■■■□□ 2.85
GMDS-203ENST00000467288 NPM1P06748 294 aaKnown RBP eCLIP32.83■■■□□ 2.85
GMDS-203ENST00000467288 UGGT2Q9NYU1 1516 aa32.78■■■□□ 2.84
GMDS-203ENST00000467288 PTPRGP23470 1445 aa32.77■■■□□ 2.84
GMDS-203ENST00000467288 TNIKQ9UKE5 1360 aa32.77■■■□□ 2.84
GMDS-203ENST00000467288 FAM69CQ0P6D2 419 aa32.76■■■□□ 2.83
GMDS-203ENST00000467288 DISP1Q96F81 1524 aa32.76■■■□□ 2.83
GMDS-203ENST00000467288 ADCY10Q96PN6 1610 aa32.75■■■□□ 2.83
GMDS-203ENST00000467288 CSRNP3Q8WYN3 585 aa32.73■■■□□ 2.83
GMDS-203ENST00000467288 CTTNBP2Q8WZ74 1663 aa32.71■■■□□ 2.83
GMDS-203ENST00000467288 EEA1Q15075 1411 aa32.7■■■□□ 2.83
GMDS-203ENST00000467288 ABCC10Q5T3U5 1492 aa32.66■■■□□ 2.82
GMDS-203ENST00000467288 MAPKBP1O60336 1514 aa32.64■■■□□ 2.82
GMDS-203ENST00000467288 TTBK1Q5TCY1 1321 aaPredicted RBP32.64■■■□□ 2.82
GMDS-203ENST00000467288 KIAA0556O60303 1618 aa32.63■■■□□ 2.81
GMDS-203ENST00000467288 CHIC1Q5VXU3 224 aa32.6■■■□□ 2.81
GMDS-203ENST00000467288 KIF13AQ9H1H9 1805 aa32.59■■■□□ 2.81
GMDS-203ENST00000467288 UHRF1BP1LA0JNW5 1464 aa32.56■■■□□ 2.8
GMDS-203ENST00000467288 UACAQ9BZF9 1416 aa32.55■■■□□ 2.8
GMDS-203ENST00000467288 GOLGA3Q08378 1498 aa32.54■■■□□ 2.8
GMDS-203ENST00000467288 ABCC2Q92887 1545 aa32.53■■■□□ 2.8
GMDS-203ENST00000467288 FAM9AQ8IZU1 332 aaPredicted RBP32.49■■■□□ 2.79
GMDS-203ENST00000467288 DIP2BQ9P265 1576 aa32.46■■■□□ 2.79
GMDS-203ENST00000467288 KDM5BQ9UGL1 1544 aa32.4■■■□□ 2.78
GMDS-203ENST00000467288 KIF21BO75037 1637 aa32.38■■■□□ 2.77
GMDS-203ENST00000467288 PLB1Q6P1J6 1458 aa32.35■■■□□ 2.77
GMDS-203ENST00000467288 ASXL2Q76L83 1435 aa32.35■■■□□ 2.77
GMDS-203ENST00000467288 ABCA8O94911 1581 aa32.32■■■□□ 2.77
GMDS-203ENST00000467288 SAMD9Q5K651 1589 aa32.31■■■□□ 2.76
GMDS-203ENST00000467288 ZCCHC11Q5TAX3 1644 aaKnown RBP32.29■■■□□ 2.76
GMDS-203ENST00000467288 P3H3Q8IVL6 736 aa32.27■■■□□ 2.76
GMDS-203ENST00000467288 GLI2P10070 1586 aa32.23■■■□□ 2.75
GMDS-203ENST00000467288 KDM6BO15054 1643 aa32.22■■■□□ 2.75
GMDS-203ENST00000467288 KDM4FA0A1W2PPD8 638 aa32.18■■■□□ 2.74
GMDS-203ENST00000467288 EPRSP07814 1512 aaKnown RBP32.17■■■□□ 2.74
GMDS-203ENST00000467288 TSPOAP1O95153 1857 aa32.16■■■□□ 2.74
GMDS-203ENST00000467288 RANGAP1P46060 587 aaPredicted RBP32.13■■■□□ 2.73
GMDS-203ENST00000467288 WDR7Q9Y4E6 1490 aa32.13■■■□□ 2.73
GMDS-203ENST00000467288 UBTFP17480 764 aaKnown RBP32.09■■■□□ 2.73
GMDS-203ENST00000467288 EFCAB5A4FU69 1503 aa32.09■■■□□ 2.73
GMDS-203ENST00000467288 FHOD3Q2V2M9 1422 aa32.09■■■□□ 2.73
GMDS-203ENST00000467288 ATP10BO94823 1461 aa32.06■■■□□ 2.72
GMDS-203ENST00000467288 EHMT2Q96KQ7 1210 aa32.06■■■□□ 2.72
GMDS-203ENST00000467288 PPRC1Q5VV67 1664 aaKnown RBP32.05■■■□□ 2.72
GMDS-203ENST00000467288 RAPGEF6Q8TEU7 1601 aa32.05■■■□□ 2.72
GMDS-203ENST00000467288 MAP3K4Q9Y6R4 1608 aa32.05■■■□□ 2.72
GMDS-203ENST00000467288 ARID3CA6NKF2 412 aa31.98■■■□□ 2.71
GMDS-203ENST00000467288 COL17A1Q9UMD9 1497 aaPredicted RBP31.97■■■□□ 2.71
GMDS-203ENST00000467288 NUP153P49790 1475 aaKnown RBP31.96■■■□□ 2.71
GMDS-203ENST00000467288 KCNH8Q96L42 1107 aa31.95■■■□□ 2.71
GMDS-203ENST00000467288 TEX14Q8IWB6 1497 aa31.92■■■□□ 2.7
GMDS-203ENST00000467288 ARHGAP35Q9NRY4 1499 aa31.9■■■□□ 2.7
GMDS-203ENST00000467288 CFAP43Q8NDM7 1665 aa31.89■■■□□ 2.7
GMDS-203ENST00000467288 CD109Q6YHK3 1445 aa31.87■■■□□ 2.69
GMDS-203ENST00000467288 MAGI3Q5TCQ9 1506 aa31.86■■■□□ 2.69
GMDS-203ENST00000467288 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.83■■■□□ 2.69
GMDS-203ENST00000467288 HNRNPUL2Q1KMD3 747 aaKnown RBP31.83■■■□□ 2.69
GMDS-203ENST00000467288 FMN1Q68DA7 1419 aa31.8■■■□□ 2.68
GMDS-203ENST00000467288 ABCA9Q8IUA7 1624 aa31.76■■■□□ 2.67
GMDS-203ENST00000467288 ADGRL1O94910 1474 aa31.75■■■□□ 2.67
GMDS-203ENST00000467288 PLEKHD1A6NEE1 506 aa31.73■■■□□ 2.67
GMDS-203ENST00000467288 CDK13Q14004 1512 aaKnown RBP31.68■■■□□ 2.66
GMDS-203ENST00000467288 HECW1Q76N89 1606 aa31.67■■■□□ 2.66
GMDS-203ENST00000467288 ATP1B4Q9UN42 357 aaPredicted RBP31.61■■■□□ 2.65
GMDS-203ENST00000467288 ARAP3Q8WWN8 1544 aa31.59■■■□□ 2.65
GMDS-203ENST00000467288 PHLDB1Q86UU1 1377 aa31.59■■■□□ 2.65
GMDS-203ENST00000467288 CLIP1P30622 1438 aa31.57■■■□□ 2.64
GMDS-203ENST00000467288 NEO1Q92859 1461 aa31.56■■■□□ 2.64
GMDS-203ENST00000467288 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.55■■■□□ 2.64
GMDS-203ENST00000467288 CASKIN1Q8WXD9 1431 aa31.52■■■□□ 2.64
GMDS-203ENST00000467288 CDK11AQ9UQ88 783 aaPredicted RBP31.51■■■□□ 2.63
GMDS-203ENST00000467288 PCF11O94913 1555 aaKnown RBP31.49■■■□□ 2.63
GMDS-203ENST00000467288 TTC37Q6PGP7 1564 aa31.49■■■□□ 2.63
GMDS-203ENST00000467288 LRRIQ1Q96JM4 1722 aa31.49■■■□□ 2.63
GMDS-203ENST00000467288 TROQ12816 1431 aaPredicted RBP31.43■■■□□ 2.62
GMDS-203ENST00000467288 CCDC18Q5T9S5 1454 aa31.42■■■□□ 2.62
GMDS-203ENST00000467288 RAPGEF3O95398 923 aa31.42■■■□□ 2.62
GMDS-203ENST00000467288 FYCO1Q9BQS8 1478 aa31.41■■■□□ 2.62
GMDS-203ENST00000467288 FANCAO15360 1455 aa31.4■■■□□ 2.62
GMDS-203ENST00000467288 PLCH2O75038 1416 aa31.39■■■□□ 2.62
GMDS-203ENST00000467288 AKNAQ7Z591 1439 aa31.39■■■□□ 2.62
GMDS-203ENST00000467288 CFAP74Q9C0B2 1584 aa31.39■■■□□ 2.61
GMDS-203ENST00000467288 KIF14Q15058 1648 aa31.36■■■□□ 2.61
GMDS-203ENST00000467288 ILDR1Q86SU0 546 aaPredicted RBP31.35■■■□□ 2.61
GMDS-203ENST00000467288 FRMPD1Q5SYB0 1578 aa31.34■■■□□ 2.61
GMDS-203ENST00000467288 CEP162Q5TB80 1403 aa31.32■■■□□ 2.61
GMDS-203ENST00000467288 DENND4BO75064 1496 aaPredicted RBP31.32■■■□□ 2.6
GMDS-203ENST00000467288 HECW2Q9P2P5 1572 aa31.3■■■□□ 2.6
GMDS-203ENST00000467288 MYO5CQ9NQX4 1742 aa31.29■■■□□ 2.6
GMDS-203ENST00000467288 RICTORQ6R327 1708 aa31.27■■■□□ 2.6
GMDS-203ENST00000467288 LOC105371045A0A1W2PR82 267 aa31.25■■■□□ 2.59
GMDS-203ENST00000467288 EFCAB2Q5VUJ9 269 aa31.25■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 126 ms