RNA–Protein interactions for RNA: ENST00000467201.5

LRCH4-202, Transcript of leucine rich repeats and calponin homology domain containing 4, humanhuman

TSL 2

Gene LRCH4, Length 4,754 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4-202ENST00000467201 DNTTIP2Q5QJE6 756 aaKnown RBP20.52■□□□□ 0.88
LRCH4-202ENST00000467201 PTMAP06454 111 aaKnown RBP20.49■□□□□ 0.87
LRCH4-202ENST00000467201 P3H3Q8IVL6 736 aa20.49■□□□□ 0.87
LRCH4-202ENST00000467201 SLC24A1O60721 1099 aa20.47■□□□□ 0.87
LRCH4-202ENST00000467201 NCLP19338 710 aaKnown RBP20.44■□□□□ 0.86
LRCH4-202ENST00000467201 EIF4G2P78344 907 aaKnown RBP eCLIP20.43■□□□□ 0.861e-6■■■■□ 22.7
LRCH4-202ENST00000467201 WDR43Q15061 677 aaKnown RBP eCLIP20.42■□□□□ 0.86
LRCH4-202ENST00000467201 ARID4BQ4LE39 1312 aaPredicted RBP20.41■□□□□ 0.86
LRCH4-202ENST00000467201 L1TD1Q5T7N2 865 aaKnown RBP20.4■□□□□ 0.86
LRCH4-202ENST00000467201 SENP3-EIF4A1A0A087X0R7 540 aa20.39■□□□□ 0.85
LRCH4-202ENST00000467201 PNNQ9H307 717 aaKnown RBP20.38■□□□□ 0.85
LRCH4-202ENST00000467201 RGS3P49796 1198 aa20.33■□□□□ 0.84
LRCH4-202ENST00000467201 AMER1Q5JTC6 1135 aaPredicted RBP20.32■□□□□ 0.84
LRCH4-202ENST00000467201 ARID3CA6NKF2 412 aa20.27■□□□□ 0.84
LRCH4-202ENST00000467201 VSIG10Q8N0Z9 540 aa20.27■□□□□ 0.84
LRCH4-202ENST00000467201 MSNP26038 577 aaKnown RBP20.26■□□□□ 0.83
LRCH4-202ENST00000467201 ZNF777Q9ULD5 760 aaPredicted RBP20.23■□□□□ 0.83
LRCH4-202ENST00000467201 IPO9Q96P70 1041 aaKnown RBP20.22■□□□□ 0.83
LRCH4-202ENST00000467201 CHIC2Q9UKJ5 165 aa20.22■□□□□ 0.83
LRCH4-202ENST00000467201 HSP90AA2PQ14568 343 aaPredicted RBP20.21■□□□□ 0.83
LRCH4-202ENST00000467201 MYH16Q9H6N6 1097 aa20.21■□□□□ 0.83
LRCH4-202ENST00000467201 CCER2I3L3R5 266 aa20.2■□□□□ 0.82
LRCH4-202ENST00000467201 RSPH6AQ9H0K4 717 aa20.2■□□□□ 0.82
LRCH4-202ENST00000467201 PLCB2Q00722 1185 aa20.17■□□□□ 0.82
LRCH4-202ENST00000467201 ARID3AQ99856 593 aa20.15■□□□□ 0.82
LRCH4-202ENST00000467201 KDM2AQ9Y2K7 1162 aa20.15■□□□□ 0.82
LRCH4-202ENST00000467201 CHAF1AQ13111 956 aaPredicted RBP20.13■□□□□ 0.81
LRCH4-202ENST00000467201 CLIP1P30622 1438 aa20.12■□□□□ 0.81
LRCH4-202ENST00000467201 PRKCSHP14314 528 aaPredicted RBP20.11■□□□□ 0.81
LRCH4-202ENST00000467201 HSP90AB1P08238 724 aaKnown RBP20.11■□□□□ 0.81
LRCH4-202ENST00000467201 TPRNQ4KMQ1 711 aa20.1■□□□□ 0.81
LRCH4-202ENST00000467201 USP35Q9P2H5 1018 aa20.1■□□□□ 0.81
LRCH4-202ENST00000467201 GZF1Q9H116 711 aaPredicted RBP20.08■□□□□ 0.81
LRCH4-202ENST00000467201 CEP162Q5TB80 1403 aa20.08■□□□□ 0.81
LRCH4-202ENST00000467201 SIN3AQ96ST3 1273 aa20.08■□□□□ 0.8
LRCH4-202ENST00000467201 TCERG1O14776 1098 aaKnown RBP20.07■□□□□ 0.8
LRCH4-202ENST00000467201 SCRIBQ14160 1630 aa20.06■□□□□ 0.8
LRCH4-202ENST00000467201 ZCCHC6Q5VYS8 1495 aaKnown RBP20.04■□□□□ 0.8
LRCH4-202ENST00000467201 HSCBQ8IWL3 235 aa20.04■□□□□ 0.8
LRCH4-202ENST00000467201 SPRYD3Q8NCJ5 442 aa20.04■□□□□ 0.8
LRCH4-202ENST00000467201 FANCIQ9NVI1 1328 aa20.04■□□□□ 0.8
LRCH4-202ENST00000467201 SLKQ9H2G2 1235 aaPredicted RBP20.03■□□□□ 0.8
LRCH4-202ENST00000467201 GOLGA6L3A6NEY3 463 aa20.03■□□□□ 0.8
LRCH4-202ENST00000467201 ZRSR1Q15695 479 aaKnown RBP20.03■□□□□ 0.8
LRCH4-202ENST00000467201 TIMELESSQ9UNS1 1208 aa20.01■□□□□ 0.79
LRCH4-202ENST00000467201 ANO8Q9HCE9 1232 aaPredicted RBP20■□□□□ 0.79
LRCH4-202ENST00000467201 FTSJ3Q8IY81 847 aaKnown RBP19.99■□□□□ 0.79
LRCH4-202ENST00000467201 GSE1Q14687 1217 aa19.98■□□□□ 0.79
LRCH4-202ENST00000467201 TNNT3P45378 269 aaPredicted RBP19.97■□□□□ 0.79
LRCH4-202ENST00000467201 FRAT1Q92837 279 aaPredicted RBP19.96■□□□□ 0.79
LRCH4-202ENST00000467201 RRP7BPQ9NSQ0 103 aa19.96■□□□□ 0.79
LRCH4-202ENST00000467201 CASC1Q6TDU7 716 aa19.96■□□□□ 0.79
LRCH4-202ENST00000467201 ZBTB7CA1YPR0 619 aa19.94■□□□□ 0.78
LRCH4-202ENST00000467201 CHGAP10645 457 aaKnown RBP19.94■□□□□ 0.78
LRCH4-202ENST00000467201 KIAA2012Q0VF49 1180 aa19.93■□□□□ 0.78
LRCH4-202ENST00000467201 GBP4Q96PP9 640 aa19.92■□□□□ 0.78
LRCH4-202ENST00000467201 NRDCO43847 1150 aa19.92■□□□□ 0.78
LRCH4-202ENST00000467201 MTUS2Q5JR59 1369 aa19.91■□□□□ 0.78
LRCH4-202ENST00000467201 FBLN2P98095 1184 aa19.91■□□□□ 0.78
LRCH4-202ENST00000467201 PKNOX2Q96KN3 472 aa19.89■□□□□ 0.78
LRCH4-202ENST00000467201 GOLGA6L6A8MZA4 724 aa19.88■□□□□ 0.77
LRCH4-202ENST00000467201 NEUROD2Q15784 382 aa19.88■□□□□ 0.77
LRCH4-202ENST00000467201 KNSTRNQ9Y448 316 aa19.87■□□□□ 0.77
LRCH4-202ENST00000467201 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.86■□□□□ 0.77
LRCH4-202ENST00000467201 RB1CC1Q8TDY2 1594 aa19.86■□□□□ 0.77
LRCH4-202ENST00000467201 PTMSP20962 102 aa19.85■□□□□ 0.77
LRCH4-202ENST00000467201 TNIKQ9UKE5 1360 aa19.84■□□□□ 0.77
LRCH4-202ENST00000467201 RCAN3Q9UKA8 241 aa19.84■□□□□ 0.77
LRCH4-202ENST00000467201 CARD11Q9BXL7 1154 aa19.83■□□□□ 0.77
LRCH4-202ENST00000467201 GOLGA3Q08378 1498 aa19.81■□□□□ 0.76
LRCH4-202ENST00000467201 DRC7Q8IY82 874 aa19.8■□□□□ 0.76
LRCH4-202ENST00000467201 TSPY4P0CV99 314 aa19.79■□□□□ 0.76
LRCH4-202ENST00000467201 TSPY10P0CW01 314 aa19.79■□□□□ 0.76
LRCH4-202ENST00000467201 MS4A1P11836 297 aa19.79■□□□□ 0.76
LRCH4-202ENST00000467201 CFAP53Q96M91 514 aa19.79■□□□□ 0.76
LRCH4-202ENST00000467201 KCNH8Q96L42 1107 aa19.79■□□□□ 0.76
LRCH4-202ENST00000467201 GOLGA6L4A6NEF3 574 aa19.78■□□□□ 0.76
LRCH4-202ENST00000467201 EEA1Q15075 1411 aa19.78■□□□□ 0.76
LRCH4-202ENST00000467201 NUDCQ9Y266 331 aa19.77■□□□□ 0.75
LRCH4-202ENST00000467201 PDE4AP27815 886 aa19.76■□□□□ 0.75
LRCH4-202ENST00000467201 SLC4A3P48751 1232 aa19.75■□□□□ 0.75
LRCH4-202ENST00000467201 A0A0U1RQG5 324 aaPredicted RBP19.74■□□□□ 0.75
LRCH4-202ENST00000467201 RGL3Q3MIN7 710 aa19.74■□□□□ 0.75
LRCH4-202ENST00000467201 CDCA8Q53HL2 280 aa19.73■□□□□ 0.75
LRCH4-202ENST00000467201 CC2D1BQ5T0F9 858 aaKnown RBP19.73■□□□□ 0.75
LRCH4-202ENST00000467201 CHMP4BQ9H444 224 aaKnown RBP19.73■□□□□ 0.75
LRCH4-202ENST00000467201 HSPA5P11021 654 aaKnown RBP19.71■□□□□ 0.75
LRCH4-202ENST00000467201 IL27Q8NEV9 243 aa19.71■□□□□ 0.75
LRCH4-202ENST00000467201 CALD1Q05682 793 aaKnown RBP19.71■□□□□ 0.75
LRCH4-202ENST00000467201 FAM13BQ9NYF5 915 aa19.68■□□□□ 0.74
LRCH4-202ENST00000467201 CCNB3Q8WWL7 1395 aa19.67■□□□□ 0.74
LRCH4-202ENST00000467201 NACADO15069 1562 aa19.67■□□□□ 0.74
LRCH4-202ENST00000467201 PODXL2Q9NZ53 605 aa19.66■□□□□ 0.74
LRCH4-202ENST00000467201 SYAP1Q96A49 352 aaPredicted RBP19.66■□□□□ 0.74
LRCH4-202ENST00000467201 MAPK8IP3Q9UPT6 1336 aa19.64■□□□□ 0.73
LRCH4-202ENST00000467201 DDX11L8A8MPP1 907 aa19.63■□□□□ 0.73
LRCH4-202ENST00000467201 MFAP1P55081 439 aaKnown RBP19.63■□□□□ 0.73
LRCH4-202ENST00000467201 STAG3Q9UJ98 1225 aa19.62■□□□□ 0.73
LRCH4-202ENST00000467201 CFAP44Q96MT7 982 aa19.61■□□□□ 0.73
LRCH4-202ENST00000467201 BRPF3Q9ULD4 1205 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms