RNA–Protein interactions for RNA: ENST00000467078.5

APBB3-206, Transcript of amyloid beta precursor protein binding family B member 3, humanhuman

TSL 1 (best)

Gene APBB3, Length 1,920 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APBB3-206ENST00000467078 GRIN2BQ13224 1484 aa24.6■■□□□ 1.53
APBB3-206ENST00000467078 ADAMTS12P58397 1594 aa24.58■■□□□ 1.53
APBB3-206ENST00000467078 FHAD1B1AJZ9 1412 aa24.56■■□□□ 1.52
APBB3-206ENST00000467078 APLP2Q06481 763 aa24.56■■□□□ 1.52
APBB3-206ENST00000467078 TTBK1Q5TCY1 1321 aaPredicted RBP24.54■■□□□ 1.52
APBB3-206ENST00000467078 EIF4G3O43432 1585 aaKnown RBP24.54■■□□□ 1.52
APBB3-206ENST00000467078 EFCAB5A4FU69 1503 aa24.53■■□□□ 1.52
APBB3-206ENST00000467078 SAMD9Q5K651 1589 aa24.42■■□□□ 1.5
APBB3-206ENST00000467078 SNAPC4Q5SXM2 1469 aa24.42■■□□□ 1.5
APBB3-206ENST00000467078 FHOD3Q2V2M9 1422 aa24.39■■□□□ 1.5
APBB3-206ENST00000467078 P3H3Q8IVL6 736 aa24.38■■□□□ 1.49
APBB3-206ENST00000467078 MAP3K1Q13233 1512 aa24.38■■□□□ 1.49
APBB3-206ENST00000467078 MAGI1Q96QZ7 1491 aaPredicted RBP24.37■■□□□ 1.49
APBB3-206ENST00000467078 IQGAP2Q13576 1575 aa24.36■■□□□ 1.49
APBB3-206ENST00000467078 PCF11O94913 1555 aaKnown RBP24.35■■□□□ 1.49
APBB3-206ENST00000467078 TIAM1Q13009 1591 aa24.34■■□□□ 1.49
APBB3-206ENST00000467078 KANK4Q5T7N3 995 aaPredicted RBP24.33■■□□□ 1.49
APBB3-206ENST00000467078 GRIN2AQ12879 1464 aa24.32■■□□□ 1.48
APBB3-206ENST00000467078 FYCO1Q9BQS8 1478 aa24.3■■□□□ 1.48
APBB3-206ENST00000467078 FMN1Q68DA7 1419 aa24.3■■□□□ 1.48
APBB3-206ENST00000467078 CFAP43Q8NDM7 1665 aa24.3■■□□□ 1.48
APBB3-206ENST00000467078 CASKIN1Q8WXD9 1431 aa24.29■■□□□ 1.48
APBB3-206ENST00000467078 SYNJ2O15056 1496 aa24.28■■□□□ 1.48
APBB3-206ENST00000467078 KIAA0586Q9BVV6 1533 aa24.25■■□□□ 1.47
APBB3-206ENST00000467078 UGGT2Q9NYU1 1516 aa24.24■■□□□ 1.47
APBB3-206ENST00000467078 LRRC9Q6ZRR7 1453 aa24.2■■□□□ 1.46
APBB3-206ENST00000467078 CHMP7Q8WUX9 453 aaPredicted RBP24.19■■□□□ 1.46
APBB3-206ENST00000467078 CEP170Q5SW79 1584 aa24.18■■□□□ 1.46
APBB3-206ENST00000467078 LRRIQ1Q96JM4 1722 aa24.16■■□□□ 1.46
APBB3-206ENST00000467078 ATP1B4Q9UN42 357 aaPredicted RBP24.14■■□□□ 1.46
APBB3-206ENST00000467078 RRBP1Q9P2E9 1410 aaKnown RBP24.14■■□□□ 1.45
APBB3-206ENST00000467078 NUP160Q12769 1436 aa24.13■■□□□ 1.45
APBB3-206ENST00000467078 KIAA0556O60303 1618 aa24.11■■□□□ 1.45
APBB3-206ENST00000467078 DISP1Q96F81 1524 aa24.1■■□□□ 1.45
APBB3-206ENST00000467078 FBLN2P98095 1184 aa24.09■■□□□ 1.45
APBB3-206ENST00000467078 HNRNPUL2Q1KMD3 747 aaKnown RBP24.07■■□□□ 1.44
APBB3-206ENST00000467078 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.06■■□□□ 1.44
APBB3-206ENST00000467078 HECW1Q76N89 1606 aa24.04■■□□□ 1.44
APBB3-206ENST00000467078 CCNB3Q8WWL7 1395 aa24.03■■□□□ 1.44
APBB3-206ENST00000467078 CHD1O14646 1710 aa24.02■■□□□ 1.44
APBB3-206ENST00000467078 CCDC18Q5T9S5 1454 aa24■■□□□ 1.43
APBB3-206ENST00000467078 CCER1Q8TC90 406 aaPredicted RBP23.99■■□□□ 1.43
APBB3-206ENST00000467078 PHLDB1Q86UU1 1377 aa23.99■■□□□ 1.43
APBB3-206ENST00000467078 JPH4Q96JJ6 628 aa23.95■■□□□ 1.42
APBB3-206ENST00000467078 MTUS2Q5JR59 1369 aa23.95■■□□□ 1.42
APBB3-206ENST00000467078 EPRSP07814 1512 aaKnown RBP23.94■■□□□ 1.42
APBB3-206ENST00000467078 EHBP1L1Q8N3D4 1523 aa23.93■■□□□ 1.42
APBB3-206ENST00000467078 CARMIL2Q6F5E8 1435 aa23.92■■□□□ 1.42
APBB3-206ENST00000467078 RAPGEF6Q8TEU7 1601 aa23.92■■□□□ 1.42
APBB3-206ENST00000467078 SUPT6HQ7KZ85 1726 aaKnown RBP23.91■■□□□ 1.42
APBB3-206ENST00000467078 MAGI3Q5TCQ9 1506 aa23.89■■□□□ 1.41
APBB3-206ENST00000467078 CDK13Q14004 1512 aaKnown RBP23.87■■□□□ 1.41
APBB3-206ENST00000467078 NCOA2Q15596 1464 aa23.85■■□□□ 1.41
APBB3-206ENST00000467078 NUP153P49790 1475 aaKnown RBP23.84■■□□□ 1.41
APBB3-206ENST00000467078 ARHGEF11O15085 1522 aa23.83■■□□□ 1.41
APBB3-206ENST00000467078 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.82■■□□□ 1.4
APBB3-206ENST00000467078 FGD6Q6ZV73 1430 aa23.81■■□□□ 1.4
APBB3-206ENST00000467078 SHROOM2Q13796 1616 aa23.8■■□□□ 1.4
APBB3-206ENST00000467078 PLB1Q6P1J6 1458 aa23.77■■□□□ 1.4
APBB3-206ENST00000467078 MYOM3Q5VTT5 1437 aa23.77■■□□□ 1.4
APBB3-206ENST00000467078 PRG4Q92954 1404 aaPredicted RBP23.77■■□□□ 1.4
APBB3-206ENST00000467078 FAM50AQ14320 339 aaKnown RBP23.76■■□□□ 1.39
APBB3-206ENST00000467078 ITGAEP38570 1179 aa23.75■■□□□ 1.39
APBB3-206ENST00000467078 ABCA8O94911 1581 aa23.75■■□□□ 1.39
APBB3-206ENST00000467078 ARID3CA6NKF2 412 aa23.72■■□□□ 1.39
APBB3-206ENST00000467078 PTPN23Q9H3S7 1636 aa23.69■■□□□ 1.38
APBB3-206ENST00000467078 CLASP1Q7Z460 1538 aa23.68■■□□□ 1.38
APBB3-206ENST00000467078 CDK11AQ9UQ88 783 aaPredicted RBP23.67■■□□□ 1.38
APBB3-206ENST00000467078 PTPRGP23470 1445 aa23.65■■□□□ 1.38
APBB3-206ENST00000467078 DHX57Q6P158 1386 aaKnown RBP23.64■■□□□ 1.37
APBB3-206ENST00000467078 TCOF1Q13428 1488 aaKnown RBP23.63■■□□□ 1.37
APBB3-206ENST00000467078 SETD5Q9C0A6 1442 aa23.63■■□□□ 1.37
APBB3-206ENST00000467078 TROQ12816 1431 aaPredicted RBP23.63■■□□□ 1.37
APBB3-206ENST00000467078 ADCY10Q96PN6 1610 aa23.62■■□□□ 1.37
APBB3-206ENST00000467078 MIA2Q96PC5 1412 aa23.62■■□□□ 1.37
APBB3-206ENST00000467078 RAB3GAP2Q9H2M9 1393 aa23.61■■□□□ 1.37
APBB3-206ENST00000467078 ERCC6L2Q5T890 1561 aa23.6■■□□□ 1.37
APBB3-206ENST00000467078 CLSPNQ9HAW4 1339 aa23.59■■□□□ 1.37
APBB3-206ENST00000467078 ATP10BO94823 1461 aa23.59■■□□□ 1.37
APBB3-206ENST00000467078 SCAF1Q9H7N4 1312 aaKnown RBP23.58■■□□□ 1.36
APBB3-206ENST00000467078 PTPRKQ15262 1439 aa23.56■■□□□ 1.36
APBB3-206ENST00000467078 KIF14Q15058 1648 aa23.54■■□□□ 1.36
APBB3-206ENST00000467078 ITSN2Q9NZM3 1697 aa23.53■■□□□ 1.36
APBB3-206ENST00000467078 UACAQ9BZF9 1416 aa23.53■■□□□ 1.36
APBB3-206ENST00000467078 PLEKHD1A6NEE1 506 aa23.49■■□□□ 1.35
APBB3-206ENST00000467078 DIEXFQ68CQ4 756 aaKnown RBP23.48■■□□□ 1.35
APBB3-206ENST00000467078 HFM1A2PYH4 1435 aa23.48■■□□□ 1.35
APBB3-206ENST00000467078 ABCC2Q92887 1545 aa23.46■■□□□ 1.35
APBB3-206ENST00000467078 GPATCH8Q9UKJ3 1502 aaKnown RBP23.45■■□□□ 1.34
APBB3-206ENST00000467078 CDC42BPAQ5VT25 1732 aa23.44■■□□□ 1.34
APBB3-206ENST00000467078 ABCC10Q5T3U5 1492 aa23.43■■□□□ 1.34
APBB3-206ENST00000467078 DNMT1P26358 1616 aaKnown RBP23.43■■□□□ 1.34
APBB3-206ENST00000467078 NAIPQ13075 1403 aa23.43■■□□□ 1.34
APBB3-206ENST00000467078 GCC2Q8IWJ2 1684 aa23.42■■□□□ 1.34
APBB3-206ENST00000467078 MAPKBP1O60336 1514 aa23.4■■□□□ 1.34
APBB3-206ENST00000467078 ACIN1Q9UKV3 1341 aaKnown RBP23.4■■□□□ 1.34
APBB3-206ENST00000467078 AKNAQ7Z591 1439 aa23.4■■□□□ 1.34
APBB3-206ENST00000467078 UHRF1BP1LA0JNW5 1464 aa23.38■■□□□ 1.33
APBB3-206ENST00000467078 PELP1Q8IZL8 1130 aaKnown RBP23.37■■□□□ 1.33
APBB3-206ENST00000467078 DAPK1P53355 1430 aa23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms