RNA–Protein interactions for RNA: ENST00000466969.1

UBR4-210, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-210ENST00000466969 NUP160Q12769 1436 aa24.16■■□□□ 1.46
UBR4-210ENST00000466969 SOCS7O14512 581 aa24.11■■□□□ 1.45
UBR4-210ENST00000466969 PRG4Q92954 1404 aaPredicted RBP24.1■■□□□ 1.45
UBR4-210ENST00000466969 CUX1P39880 1505 aa24.07■■□□□ 1.44
UBR4-210ENST00000466969 ABCA5Q8WWZ7 1642 aa24.03■■□□□ 1.44
UBR4-210ENST00000466969 JPH4Q96JJ6 628 aa23.99■■□□□ 1.43
UBR4-210ENST00000466969 ABCA10Q8WWZ4 1543 aa23.99■■□□□ 1.43
UBR4-210ENST00000466969 ADAMTS12P58397 1594 aa23.98■■□□□ 1.43
UBR4-210ENST00000466969 ILDR2Q71H61 639 aa23.95■■□□□ 1.42
UBR4-210ENST00000466969 ADCY10Q96PN6 1610 aa23.95■■□□□ 1.42
UBR4-210ENST00000466969 FHAD1B1AJZ9 1412 aa23.91■■□□□ 1.42
UBR4-210ENST00000466969 DISP3Q9P2K9 1392 aa23.89■■□□□ 1.41
UBR4-210ENST00000466969 TOP2BQ02880 1626 aa23.84■■□□□ 1.41
UBR4-210ENST00000466969 PPRC1Q5VV67 1664 aaKnown RBP23.78■■□□□ 1.4
UBR4-210ENST00000466969 COL17A1Q9UMD9 1497 aaPredicted RBP23.77■■□□□ 1.4
UBR4-210ENST00000466969 GLI2P10070 1586 aa23.71■■□□□ 1.39
UBR4-210ENST00000466969 RUSC2Q8N2Y8 1516 aa23.67■■□□□ 1.38
UBR4-210ENST00000466969 PLB1Q6P1J6 1458 aa23.67■■□□□ 1.38
UBR4-210ENST00000466969 WRNQ14191 1432 aaPredicted RBP eCLIP23.67■■□□□ 1.38
UBR4-210ENST00000466969 ERICH3Q5RHP9 1530 aa23.66■■□□□ 1.38
UBR4-210ENST00000466969 TEX14Q8IWB6 1497 aa23.65■■□□□ 1.38
UBR4-210ENST00000466969 ASXL2Q76L83 1435 aa23.65■■□□□ 1.38
UBR4-210ENST00000466969 ABCC2Q92887 1545 aa23.58■■□□□ 1.36
UBR4-210ENST00000466969 CERKQ8TCT0 537 aa23.55■■□□□ 1.36
UBR4-210ENST00000466969 PTPRGP23470 1445 aa23.55■■□□□ 1.36
UBR4-210ENST00000466969 TTBK1Q5TCY1 1321 aaPredicted RBP23.55■■□□□ 1.36
UBR4-210ENST00000466969 MAP3K4Q9Y6R4 1608 aa23.51■■□□□ 1.35
UBR4-210ENST00000466969 EPRSP07814 1512 aaKnown RBP23.49■■□□□ 1.35
UBR4-210ENST00000466969 SPATA31D1Q6ZQQ2 1576 aa23.48■■□□□ 1.35
UBR4-210ENST00000466969 PTPRMP28827 1452 aa23.47■■□□□ 1.35
UBR4-210ENST00000466969 PCF11O94913 1555 aaKnown RBP23.46■■□□□ 1.35
UBR4-210ENST00000466969 CUL7Q14999 1698 aa23.44■■□□□ 1.34
UBR4-210ENST00000466969 KIAA0586Q9BVV6 1533 aa23.44■■□□□ 1.34
UBR4-210ENST00000466969 KIF21BO75037 1637 aa23.43■■□□□ 1.34
UBR4-210ENST00000466969 TNIKQ9UKE5 1360 aa23.38■■□□□ 1.33
UBR4-210ENST00000466969 UHRF1BP1LA0JNW5 1464 aa23.35■■□□□ 1.33
UBR4-210ENST00000466969 CARMIL2Q6F5E8 1435 aa23.33■■□□□ 1.32
UBR4-210ENST00000466969 UACAQ9BZF9 1416 aa23.31■■□□□ 1.32
UBR4-210ENST00000466969 ADAMTSL3P82987 1691 aa23.31■■□□□ 1.32
UBR4-210ENST00000466969 BIVM-ERCC5R4GMW8 1640 aa23.3■■□□□ 1.32
UBR4-210ENST00000466969 HSPA2P54652 639 aa23.29■■□□□ 1.32
UBR4-210ENST00000466969 KDM5BQ9UGL1 1544 aa23.25■■□□□ 1.31
UBR4-210ENST00000466969 CD109Q6YHK3 1445 aa23.23■■□□□ 1.31
UBR4-210ENST00000466969 MAGI3Q5TCQ9 1506 aa23.23■■□□□ 1.31
UBR4-210ENST00000466969 ZCCHC11Q5TAX3 1644 aaKnown RBP23.19■■□□□ 1.3
UBR4-210ENST00000466969 WDR7Q9Y4E6 1490 aa23.18■■□□□ 1.3
UBR4-210ENST00000466969 ARID4BQ4LE39 1312 aaPredicted RBP23.16■■□□□ 1.3
UBR4-210ENST00000466969 MADDQ8WXG6 1647 aa23.15■■□□□ 1.3
UBR4-210ENST00000466969 CFAP43Q8NDM7 1665 aa23.14■■□□□ 1.29
UBR4-210ENST00000466969 BCORL1Q5H9F3 1711 aa23.12■■□□□ 1.29
UBR4-210ENST00000466969 KCNH8Q96L42 1107 aa23.1■■□□□ 1.29
UBR4-210ENST00000466969 PLPPR3Q6T4P5 718 aa23.09■■□□□ 1.29
UBR4-210ENST00000466969 ARAP3Q8WWN8 1544 aa23.08■■□□□ 1.29
UBR4-210ENST00000466969 RIMS1Q86UR5 1692 aaKnown RBP23.04■■□□□ 1.28
UBR4-210ENST00000466969 IGF1RP08069 1367 aa23.03■■□□□ 1.28
UBR4-210ENST00000466969 DMRT2Q9Y5R5 561 aa23■■□□□ 1.27
UBR4-210ENST00000466969 IQGAP2Q13576 1575 aa23■■□□□ 1.27
UBR4-210ENST00000466969 DISP1Q96F81 1524 aa22.98■■□□□ 1.27
UBR4-210ENST00000466969 RAPGEF3O95398 923 aa22.95■■□□□ 1.26
UBR4-210ENST00000466969 PHLDB1Q86UU1 1377 aa22.94■■□□□ 1.26
UBR4-210ENST00000466969 YEATS2Q9ULM3 1422 aa22.91■■□□□ 1.26
UBR4-210ENST00000466969 KIF27Q86VH2 1401 aa22.89■■□□□ 1.25
UBR4-210ENST00000466969 CARMIL1Q5VZK9 1371 aa22.88■■□□□ 1.25
UBR4-210ENST00000466969 POGZQ7Z3K3 1410 aa22.84■■□□□ 1.25
UBR4-210ENST00000466969 KIAA0556O60303 1618 aa22.81■■□□□ 1.24
UBR4-210ENST00000466969 IQSEC2Q5JU85 1478 aa22.79■■□□□ 1.24
UBR4-210ENST00000466969 UGGT2Q9NYU1 1516 aa22.79■■□□□ 1.24
UBR4-210ENST00000466969 STRCQ7RTU9 1775 aa22.76■■□□□ 1.23
UBR4-210ENST00000466969 FANCAO15360 1455 aa22.76■■□□□ 1.23
UBR4-210ENST00000466969 NEO1Q92859 1461 aa22.76■■□□□ 1.23
UBR4-210ENST00000466969 ARHGEF40Q8TER5 1519 aa22.75■■□□□ 1.23
UBR4-210ENST00000466969 PREX1Q8TCU6 1659 aa22.74■■□□□ 1.23
UBR4-210ENST00000466969 FRMPD1Q5SYB0 1578 aa22.74■■□□□ 1.23
UBR4-210ENST00000466969 MLECQ14165 292 aa22.72■■□□□ 1.23
UBR4-210ENST00000466969 PTPRTO14522 1441 aa22.72■■□□□ 1.23
UBR4-210ENST00000466969 LTBP4Q8N2S1 1624 aa22.69■■□□□ 1.22
UBR4-210ENST00000466969 TTC37Q6PGP7 1564 aa22.69■■□□□ 1.22
UBR4-210ENST00000466969 AKNAQ7Z591 1439 aa22.68■■□□□ 1.22
UBR4-210ENST00000466969 FER1L4A9Z1Z3 1794 aa22.68■■□□□ 1.22
UBR4-210ENST00000466969 ABCA9Q8IUA7 1624 aa22.68■■□□□ 1.22
UBR4-210ENST00000466969 UBAP1LF5GYI3 381 aa22.67■■□□□ 1.22
UBR4-210ENST00000466969 ABCA8O94911 1581 aa22.67■■□□□ 1.22
UBR4-210ENST00000466969 UHRF1BP1Q6BDS2 1440 aa22.65■■□□□ 1.22
UBR4-210ENST00000466969 MED1Q15648 1581 aaPredicted RBP22.63■■□□□ 1.21
UBR4-210ENST00000466969 DENND4BO75064 1496 aaPredicted RBP22.61■■□□□ 1.21
UBR4-210ENST00000466969 PHF23Q9BUL5 403 aaPredicted RBP22.61■■□□□ 1.21
UBR4-210ENST00000466969 ARID3CA6NKF2 412 aa22.6■■□□□ 1.21
UBR4-210ENST00000466969 CEBPAP49715 358 aaPredicted RBP22.6■■□□□ 1.21
UBR4-210ENST00000466969 GOLGA3Q08378 1498 aa22.55■■□□□ 1.2
UBR4-210ENST00000466969 FAM9AQ8IZU1 332 aaPredicted RBP22.55■■□□□ 1.2
UBR4-210ENST00000466969 FHOD3Q2V2M9 1422 aa22.55■■□□□ 1.2
UBR4-210ENST00000466969 RICTORQ6R327 1708 aa22.54■■□□□ 1.2
UBR4-210ENST00000466969 ZFYVE16Q7Z3T8 1539 aa22.54■■□□□ 1.2
UBR4-210ENST00000466969 SIGLEC1Q9BZZ2 1709 aa22.54■■□□□ 1.2
UBR4-210ENST00000466969 EFCAB5A4FU69 1503 aa22.53■■□□□ 1.2
UBR4-210ENST00000466969 SETD1BQ9UPS6 1966 aaKnown RBP22.52■■□□□ 1.2
UBR4-210ENST00000466969 ATP10BO94823 1461 aa22.51■■□□□ 1.19
UBR4-210ENST00000466969 RAPGEF2Q9Y4G8 1499 aa22.49■■□□□ 1.19
UBR4-210ENST00000466969 ARHGEF12Q9NZN5 1544 aa22.49■■□□□ 1.19
UBR4-210ENST00000466969 SUPT5HO00267 1087 aaKnown RBP22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms