RNA–Protein interactions for RNA: ENST00000466831.2

SPATA13-209, Transcript of spermatogenesis associated 13, humanhuman

TSL 2

Gene SPATA13, Length 2,191 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPATA13-209ENST00000466831 EFCAB5A4FU69 1503 aa28.6■■■□□ 2.17
SPATA13-209ENST00000466831 CTTNBP2Q8WZ74 1663 aa28.59■■■□□ 2.17
SPATA13-209ENST00000466831 P3H3Q8IVL6 736 aa28.55■■■□□ 2.16
SPATA13-209ENST00000466831 CCNB3Q8WWL7 1395 aa28.55■■■□□ 2.16
SPATA13-209ENST00000466831 TARBP1Q13395 1621 aaKnown RBP28.55■■■□□ 2.16
SPATA13-209ENST00000466831 LRRC9Q6ZRR7 1453 aa28.53■■■□□ 2.16
SPATA13-209ENST00000466831 FHOD3Q2V2M9 1422 aa28.53■■■□□ 2.16
SPATA13-209ENST00000466831 PCF11O94913 1555 aaKnown RBP28.53■■■□□ 2.16
SPATA13-209ENST00000466831 CFAP43Q8NDM7 1665 aa28.48■■■□□ 2.15
SPATA13-209ENST00000466831 AQRO60306 1485 aaKnown RBP eCLIP28.48■■■□□ 2.159e-8■■■■■ 30.5
SPATA13-209ENST00000466831 FYCO1Q9BQS8 1478 aa28.46■■■□□ 2.15
SPATA13-209ENST00000466831 CASKIN1Q8WXD9 1431 aa28.45■■■□□ 2.15
SPATA13-209ENST00000466831 MRC2Q9UBG0 1479 aa28.45■■■□□ 2.15
SPATA13-209ENST00000466831 CLSPNQ9HAW4 1339 aa28.41■■■□□ 2.14
SPATA13-209ENST00000466831 DHX57Q6P158 1386 aaKnown RBP28.41■■■□□ 2.14
SPATA13-209ENST00000466831 SAMD9Q5K651 1589 aa28.38■■■□□ 2.13
SPATA13-209ENST00000466831 FMN1Q68DA7 1419 aa28.38■■■□□ 2.13
SPATA13-209ENST00000466831 PHLDB1Q86UU1 1377 aa28.36■■■□□ 2.13
SPATA13-209ENST00000466831 ZNF316A6NFI3 1004 aaPredicted RBP28.36■■■□□ 2.13
SPATA13-209ENST00000466831 ATP1B4Q9UN42 357 aaPredicted RBP28.36■■■□□ 2.13
SPATA13-209ENST00000466831 DIEXFQ68CQ4 756 aaKnown RBP28.35■■■□□ 2.13
SPATA13-209ENST00000466831 PBRM1Q86U86 1689 aa28.33■■■□□ 2.13
SPATA13-209ENST00000466831 SNAPC4Q5SXM2 1469 aa28.32■■■□□ 2.12
SPATA13-209ENST00000466831 ITGAEP38570 1179 aa28.28■■■□□ 2.12
SPATA13-209ENST00000466831 WDR62O43379 1518 aa28.25■■■□□ 2.11
SPATA13-209ENST00000466831 ADAMTS12P58397 1594 aa28.24■■■□□ 2.11
SPATA13-209ENST00000466831 IFT140Q96RY7 1462 aa28.24■■■□□ 2.11
SPATA13-209ENST00000466831 GRIN2BQ13224 1484 aa28.23■■■□□ 2.11
SPATA13-209ENST00000466831 RAB3GAP2Q9H2M9 1393 aa28.18■■■□□ 2.1
SPATA13-209ENST00000466831 FAM50AQ14320 339 aaKnown RBP28.17■■■□□ 2.1
SPATA13-209ENST00000466831 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.16■■■□□ 2.1
SPATA13-209ENST00000466831 THOC2Q8NI27 1593 aaKnown RBP28.16■■■□□ 2.1
SPATA13-209ENST00000466831 ZNF608Q9ULD9 1512 aaPredicted RBP28.15■■■□□ 2.1
SPATA13-209ENST00000466831 SETD5Q9C0A6 1442 aa28.15■■■□□ 2.1
SPATA13-209ENST00000466831 LRRIQ1Q96JM4 1722 aa28.13■■■□□ 2.09
SPATA13-209ENST00000466831 IQGAP2Q13576 1575 aa28.13■■■□□ 2.09
SPATA13-209ENST00000466831 MTUS2Q5JR59 1369 aa28.1■■■□□ 2.09
SPATA13-209ENST00000466831 FGD6Q6ZV73 1430 aa28.06■■■□□ 2.08
SPATA13-209ENST00000466831 ERCC6Q03468 1493 aa28.03■■■□□ 2.08
SPATA13-209ENST00000466831 UGGT2Q9NYU1 1516 aa28.01■■■□□ 2.08
SPATA13-209ENST00000466831 CCDC18Q5T9S5 1454 aa28■■■□□ 2.07
SPATA13-209ENST00000466831 MAPKBP1O60336 1514 aa28■■■□□ 2.07
SPATA13-209ENST00000466831 EHBP1L1Q8N3D4 1523 aa28■■■□□ 2.07
SPATA13-209ENST00000466831 NCOA2Q15596 1464 aa28■■■□□ 2.07
SPATA13-209ENST00000466831 EIF4G3O43432 1585 aaKnown RBP27.98■■■□□ 2.07
SPATA13-209ENST00000466831 SUPT6HQ7KZ85 1726 aaKnown RBP27.96■■■□□ 2.07
SPATA13-209ENST00000466831 HECW1Q76N89 1606 aa27.96■■■□□ 2.07
SPATA13-209ENST00000466831 KIAA0586Q9BVV6 1533 aa27.96■■■□□ 2.07
SPATA13-209ENST00000466831 MYOM3Q5VTT5 1437 aa27.95■■■□□ 2.06
SPATA13-209ENST00000466831 MAGI3Q5TCQ9 1506 aa27.93■■■□□ 2.06
SPATA13-209ENST00000466831 ARHGEF11O15085 1522 aa27.92■■■□□ 2.06
SPATA13-209ENST00000466831 GRIN2AQ12879 1464 aa27.92■■■□□ 2.06
SPATA13-209ENST00000466831 EPRSP07814 1512 aaKnown RBP27.9■■■□□ 2.06
SPATA13-209ENST00000466831 MAGI1Q96QZ7 1491 aaPredicted RBP27.86■■■□□ 2.05
SPATA13-209ENST00000466831 DISP1Q96F81 1524 aa27.86■■■□□ 2.05
SPATA13-209ENST00000466831 PTPRKQ15262 1439 aa27.86■■■□□ 2.05
SPATA13-209ENST00000466831 KIAA0556O60303 1618 aa27.84■■■□□ 2.05
SPATA13-209ENST00000466831 PTPN23Q9H3S7 1636 aa27.81■■■□□ 2.04
SPATA13-209ENST00000466831 CDK13Q14004 1512 aaKnown RBP27.8■■■□□ 2.04
SPATA13-209ENST00000466831 MIER1Q8N108 512 aa27.8■■■□□ 2.04
SPATA13-209ENST00000466831 HFM1A2PYH4 1435 aa27.8■■■□□ 2.04
SPATA13-209ENST00000466831 ACIN1Q9UKV3 1341 aaKnown RBP27.79■■■□□ 2.04
SPATA13-209ENST00000466831 SYNJ2O15056 1496 aa27.78■■■□□ 2.04
SPATA13-209ENST00000466831 SCAF1Q9H7N4 1312 aaKnown RBP27.78■■■□□ 2.04
SPATA13-209ENST00000466831 TCOF1Q13428 1488 aaKnown RBP27.77■■■□□ 2.04
SPATA13-209ENST00000466831 CHMP7Q8WUX9 453 aaPredicted RBP27.75■■■□□ 2.03
SPATA13-209ENST00000466831 CENPBP07199 599 aaPredicted RBP27.73■■■□□ 2.03
SPATA13-209ENST00000466831 NEUROD1Q13562 356 aa27.73■■■□□ 2.03
SPATA13-209ENST00000466831 SIN3AQ96ST3 1273 aa27.73■■■□□ 2.03
SPATA13-209ENST00000466831 CEP170Q5SW79 1584 aa27.73■■■□□ 2.03
SPATA13-209ENST00000466831 NAIPQ13075 1403 aa27.72■■■□□ 2.03
SPATA13-209ENST00000466831 TIMELESSQ9UNS1 1208 aa27.7■■■□□ 2.03
SPATA13-209ENST00000466831 MIA2Q96PC5 1412 aa27.69■■■□□ 2.02
SPATA13-209ENST00000466831 NUP153P49790 1475 aaKnown RBP27.68■■■□□ 2.02
SPATA13-209ENST00000466831 RAPGEF6Q8TEU7 1601 aa27.68■■■□□ 2.02
SPATA13-209ENST00000466831 ARID3CA6NKF2 412 aa27.67■■■□□ 2.02
SPATA13-209ENST00000466831 UACAQ9BZF9 1416 aa27.67■■■□□ 2.02
SPATA13-209ENST00000466831 NUP160Q12769 1436 aa27.66■■■□□ 2.02
SPATA13-209ENST00000466831 FBLN2P98095 1184 aa27.62■■■□□ 2.01
SPATA13-209ENST00000466831 AKNAQ7Z591 1439 aa27.58■■■□□ 2.01
SPATA13-209ENST00000466831 JPH4Q96JJ6 628 aa27.57■■■□□ 2
SPATA13-209ENST00000466831 CDK11AQ9UQ88 783 aaPredicted RBP27.56■■■□□ 2
SPATA13-209ENST00000466831 CARMIL2Q6F5E8 1435 aa27.56■■■□□ 2
SPATA13-209ENST00000466831 GCC2Q8IWJ2 1684 aa27.55■■■□□ 2
SPATA13-209ENST00000466831 RRP7BPQ9NSQ0 103 aa27.53■■■□□ 2
SPATA13-209ENST00000466831 PPP1R15AO75807 674 aaPredicted RBP27.53■■■□□ 2
SPATA13-209ENST00000466831 CHIC2Q9UKJ5 165 aa27.53■■■□□ 2
SPATA13-209ENST00000466831 PLB1Q6P1J6 1458 aa27.52■■■□□ 2
SPATA13-209ENST00000466831 YTHDC1Q96MU7 727 aaKnown RBP27.49■■□□□ 1.99
SPATA13-209ENST00000466831 TROQ12816 1431 aaPredicted RBP27.48■■□□□ 1.99
SPATA13-209ENST00000466831 PRG4Q92954 1404 aaPredicted RBP27.46■■□□□ 1.99
SPATA13-209ENST00000466831 DAPK1P53355 1430 aa27.44■■□□□ 1.98
SPATA13-209ENST00000466831 KDM6BO15054 1643 aa27.43■■□□□ 1.98
SPATA13-209ENST00000466831 ROCK1Q13464 1354 aa27.43■■□□□ 1.98
SPATA13-209ENST00000466831 TONSLQ96HA7 1378 aa27.43■■□□□ 1.98
SPATA13-209ENST00000466831 ABCC5O15440 1437 aa27.42■■□□□ 1.98
SPATA13-209ENST00000466831 DNMT1P26358 1616 aaKnown RBP27.41■■□□□ 1.98
SPATA13-209ENST00000466831 ZNF644Q9H582 1327 aaPredicted RBP27.4■■□□□ 1.98
SPATA13-209ENST00000466831 ABCA8O94911 1581 aa27.39■■□□□ 1.97
SPATA13-209ENST00000466831 ADCY10Q96PN6 1610 aa27.39■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms