RNA–Protein interactions for RNA: ENST00000466454.1

CLCA3P-202, Transcript of chloride channel accessory 3, pseudogene, humanhuman

TSL 1 (best) BASIC

Gene CLCA3P, Length 3,412 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA3P-202ENST00000466454 RB1CC1Q8TDY2 1594 aa6.88□□□□□ -1.31
CLCA3P-202ENST00000466454 BBXQ8WY36 941 aaPredicted RBP6.87□□□□□ -1.31
CLCA3P-202ENST00000466454 NECTIN2Q92692 538 aa6.86□□□□□ -1.31
CLCA3P-202ENST00000466454 VASPP50552 380 aaPredicted RBP6.85□□□□□ -1.31
CLCA3P-202ENST00000466454 RSF1Q96T23 1441 aaPredicted RBP6.84□□□□□ -1.31
CLCA3P-202ENST00000466454 DHX37Q8IY37 1157 aaKnown RBP6.83□□□□□ -1.32
CLCA3P-202ENST00000466454 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.83□□□□□ -1.32
CLCA3P-202ENST00000466454 CAPN15O75808 1086 aa6.83□□□□□ -1.32
CLCA3P-202ENST00000466454 HNRNPUL2Q1KMD3 747 aaKnown RBP6.83□□□□□ -1.32
CLCA3P-202ENST00000466454 C1orf115Q9H7X2 142 aa6.82□□□□□ -1.32
CLCA3P-202ENST00000466454 BRPF1P55201 1214 aaPredicted RBP6.81□□□□□ -1.32
CLCA3P-202ENST00000466454 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.81□□□□□ -1.32
CLCA3P-202ENST00000466454 CCDC9Q9Y3X0 531 aaKnown RBP6.81□□□□□ -1.32
CLCA3P-202ENST00000466454 CDK11BP21127 795 aaKnown RBP6.81□□□□□ -1.32
CLCA3P-202ENST00000466454 CDK11AQ9UQ88 783 aaPredicted RBP6.81□□□□□ -1.32
CLCA3P-202ENST00000466454 UBE2Q2Q8WVN8 375 aa6.8□□□□□ -1.32
CLCA3P-202ENST00000466454 EIF4G1Q04637 1599 aaKnown RBP6.8□□□□□ -1.32
CLCA3P-202ENST00000466454 ARID3AQ99856 593 aa6.77□□□□□ -1.33
CLCA3P-202ENST00000466454 SCRIBQ14160 1630 aa6.76□□□□□ -1.33
CLCA3P-202ENST00000466454 BCL11AQ9H165 835 aa6.76□□□□□ -1.33
CLCA3P-202ENST00000466454 BAZ1AQ9NRL2 1556 aaPredicted RBP6.75□□□□□ -1.33
CLCA3P-202ENST00000466454 PROM2Q8N271 834 aa6.75□□□□□ -1.33
CLCA3P-202ENST00000466454 HSP90B1P14625 803 aaKnown RBP6.73□□□□□ -1.33
CLCA3P-202ENST00000466454 OSCARQ8IYS5 282 aa6.72□□□□□ -1.33
CLCA3P-202ENST00000466454 SPRYD3Q8NCJ5 442 aa6.72□□□□□ -1.33
CLCA3P-202ENST00000466454 RNF39Q9H2S5 420 aa6.71□□□□□ -1.33
CLCA3P-202ENST00000466454 BRD2P25440 801 aaKnown RBP6.71□□□□□ -1.34
CLCA3P-202ENST00000466454 ZNF428Q96B54 188 aa6.71□□□□□ -1.34
CLCA3P-202ENST00000466454 PUS7Q96PZ0 661 aaKnown RBP6.71□□□□□ -1.34
CLCA3P-202ENST00000466454 RGL2O15211 777 aa6.69□□□□□ -1.34
CLCA3P-202ENST00000466454 MROH2BQ7Z745 1585 aa6.69□□□□□ -1.34
CLCA3P-202ENST00000466454 ZBTB7CA1YPR0 619 aa6.68□□□□□ -1.34
CLCA3P-202ENST00000466454 ZEB1P37275 1124 aaPredicted RBP6.67□□□□□ -1.34
CLCA3P-202ENST00000466454 ZMYND15Q9H091 742 aa6.67□□□□□ -1.34
CLCA3P-202ENST00000466454 TOP2AP11388 1531 aaKnown RBP6.66□□□□□ -1.34
CLCA3P-202ENST00000466454 PDE4CQ08493 712 aa6.66□□□□□ -1.34
CLCA3P-202ENST00000466454 RGS22Q8NE09 1264 aa6.66□□□□□ -1.34
CLCA3P-202ENST00000466454 WIZO95785 1651 aa6.66□□□□□ -1.34
CLCA3P-202ENST00000466454 PEG3Q9GZU2 1588 aa6.65□□□□□ -1.34
CLCA3P-202ENST00000466454 PCGF6Q9BYE7 350 aa6.65□□□□□ -1.35
CLCA3P-202ENST00000466454 CECR2Q9BXF3 1484 aa6.64□□□□□ -1.35
CLCA3P-202ENST00000466454 ARID3CA6NKF2 412 aa6.64□□□□□ -1.35
CLCA3P-202ENST00000466454 UNC13AQ9UPW8 1703 aa6.64□□□□□ -1.35
CLCA3P-202ENST00000466454 FAM9AQ8IZU1 332 aaPredicted RBP6.63□□□□□ -1.35
CLCA3P-202ENST00000466454 RSPH6AQ9H0K4 717 aa6.63□□□□□ -1.35
CLCA3P-202ENST00000466454 HMGB1P09429 215 aaKnown RBP6.63□□□□□ -1.35
CLCA3P-202ENST00000466454 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.63□□□□□ -1.35
CLCA3P-202ENST00000466454 WRNQ14191 1432 aaPredicted RBP eCLIP6.63□□□□□ -1.35
CLCA3P-202ENST00000466454 SMARCA4P51532 1647 aa6.63□□□□□ -1.35
CLCA3P-202ENST00000466454 ECM2O94769 699 aaPredicted RBP6.62□□□□□ -1.35
CLCA3P-202ENST00000466454 ZNF692Q9BU19 519 aaPredicted RBP6.61□□□□□ -1.35
CLCA3P-202ENST00000466454 TAF7LQ5H9L4 462 aa6.6□□□□□ -1.35
CLCA3P-202ENST00000466454 PABPN1Q86U42 306 aaKnown RBP eCLIP6.6□□□□□ -1.35
CLCA3P-202ENST00000466454 SMARCA2P51531 1590 aa6.6□□□□□ -1.35
CLCA3P-202ENST00000466454 MTMR7Q9Y216 660 aa6.6□□□□□ -1.35
CLCA3P-202ENST00000466454 KCTD17Q8N5Z5 321 aa6.59□□□□□ -1.35
CLCA3P-202ENST00000466454 EEA1Q15075 1411 aa6.59□□□□□ -1.35
CLCA3P-202ENST00000466454 DSG3P32926 999 aa6.58□□□□□ -1.36
CLCA3P-202ENST00000466454 PLCD3Q8N3E9 789 aa6.58□□□□□ -1.36
CLCA3P-202ENST00000466454 RAD21O60216 631 aa6.57□□□□□ -1.36
CLCA3P-202ENST00000466454 NEUROD2Q15784 382 aa6.57□□□□□ -1.36
CLCA3P-202ENST00000466454 FOXD4L5Q5VV16 416 aaPredicted RBP6.57□□□□□ -1.36
CLCA3P-202ENST00000466454 MIER1Q8N108 512 aa6.57□□□□□ -1.36
CLCA3P-202ENST00000466454 FOXD4L4Q8WXT5 416 aaPredicted RBP6.57□□□□□ -1.36
CLCA3P-202ENST00000466454 TRIM41Q8WV44 630 aa6.56□□□□□ -1.36
CLCA3P-202ENST00000466454 CIZ1Q9ULV3 898 aaPredicted RBP6.56□□□□□ -1.36
CLCA3P-202ENST00000466454 CHGAP10645 457 aaKnown RBP6.55□□□□□ -1.36
CLCA3P-202ENST00000466454 RNF25Q96BH1 459 aaPredicted RBP6.55□□□□□ -1.36
CLCA3P-202ENST00000466454 BCL11BQ9C0K0 894 aaPredicted RBP6.53□□□□□ -1.36
CLCA3P-202ENST00000466454 CCDC88BA6NC98 1476 aa6.53□□□□□ -1.36
CLCA3P-202ENST00000466454 RBM25P49756 843 aaKnown RBP6.52□□□□□ -1.37
CLCA3P-202ENST00000466454 SPOCK2Q92563 424 aa6.52□□□□□ -1.37
CLCA3P-202ENST00000466454 BICRAQ9NZM4 1560 aa6.52□□□□□ -1.37
CLCA3P-202ENST00000466454 KIF21BO75037 1637 aa6.52□□□□□ -1.37
CLCA3P-202ENST00000466454 LMOD2Q6P5Q4 547 aa6.51□□□□□ -1.37
CLCA3P-202ENST00000466454 APBB1O00213 710 aa6.51□□□□□ -1.37
CLCA3P-202ENST00000466454 TNIKQ9UKE5 1360 aa6.51□□□□□ -1.37
CLCA3P-202ENST00000466454 PPARGC1BQ86YN6 1023 aaKnown RBP6.51□□□□□ -1.37
CLCA3P-202ENST00000466454 POLR3GLQ9BT43 218 aa6.49□□□□□ -1.37
CLCA3P-202ENST00000466454 C1QBPQ07021 282 aaKnown RBP6.49□□□□□ -1.37
CLCA3P-202ENST00000466454 FAM177A1Q8N128 213 aaPredicted RBP6.48□□□□□ -1.37
CLCA3P-202ENST00000466454 BRPF3Q9ULD4 1205 aa6.48□□□□□ -1.37
CLCA3P-202ENST00000466454 SLC24A3Q9HC58 644 aa6.48□□□□□ -1.37
CLCA3P-202ENST00000466454 SSUH2Q9Y2M2 353 aa6.47□□□□□ -1.37
CLCA3P-202ENST00000466454 IRX6P78412 446 aaPredicted RBP6.47□□□□□ -1.37
CLCA3P-202ENST00000466454 NKX1-1Q15270 411 aaPredicted RBP6.47□□□□□ -1.37
CLCA3P-202ENST00000466454 BAZ1BQ9UIG0 1483 aaKnown RBP6.46□□□□□ -1.37
CLCA3P-202ENST00000466454 CCDC82Q8N4S0 544 aa6.45□□□□□ -1.38
CLCA3P-202ENST00000466454 BIVM-ERCC5R4GMW8 1640 aa6.45□□□□□ -1.38
CLCA3P-202ENST00000466454 NEFLP07196 543 aa6.44□□□□□ -1.38
CLCA3P-202ENST00000466454 ABCC8Q09428 1581 aa6.44□□□□□ -1.38
CLCA3P-202ENST00000466454 ZFP91Q96JP5 570 aaPredicted RBP6.44□□□□□ -1.38
CLCA3P-202ENST00000466454 GOLGA3Q08378 1498 aa6.44□□□□□ -1.38
CLCA3P-202ENST00000466454 MFAP1P55081 439 aaKnown RBP6.43□□□□□ -1.38
CLCA3P-202ENST00000466454 TMED8Q6PL24 325 aaPredicted RBP6.43□□□□□ -1.38
CLCA3P-202ENST00000466454 CEP162Q5TB80 1403 aa6.43□□□□□ -1.38
CLCA3P-202ENST00000466454 ZC3H15Q8WU90 426 aaKnown RBP6.43□□□□□ -1.38
CLCA3P-202ENST00000466454 CWC22Q9HCG8 908 aaKnown RBP6.43□□□□□ -1.38
CLCA3P-202ENST00000466454 FGD1P98174 961 aa6.42□□□□□ -1.38
CLCA3P-202ENST00000466454 MKRN3Q13064 507 aaKnown RBP6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms