RNA–Protein interactions for RNA: ENST00000466405.1

WDR48-208, Transcript of WD repeat domain 48, humanhuman

TSL 1 (best)

Gene WDR48, Length 4,925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
WDR48-208ENST00000466405 TMC1Q8TDI8 760 aa8.76□□□□□ -1.01
WDR48-208ENST00000466405 IPO9Q96P70 1041 aaKnown RBP8.75□□□□□ -1.01
WDR48-208ENST00000466405 CANXP27824 592 aaKnown RBP8.75□□□□□ -1.01
WDR48-208ENST00000466405 SIN3AQ96ST3 1273 aa8.74□□□□□ -1.01
WDR48-208ENST00000466405 UPF2Q9HAU5 1272 aaKnown RBP8.74□□□□□ -1.01
WDR48-208ENST00000466405 EIF4G2P78344 907 aaKnown RBP eCLIP8.73□□□□□ -1.01
WDR48-208ENST00000466405 RB1CC1Q8TDY2 1594 aa8.73□□□□□ -1.01
WDR48-208ENST00000466405 P3H3Q8IVL6 736 aa8.72□□□□□ -1.01
WDR48-208ENST00000466405 WRNQ14191 1432 aaPredicted RBP eCLIP8.7□□□□□ -1.021e-7■■■■■ 66.8
WDR48-208ENST00000466405 SENP3-EIF4A1A0A087X0R7 540 aa8.69□□□□□ -1.02
WDR48-208ENST00000466405 TRIM44Q96DX7 344 aaPredicted RBP8.69□□□□□ -1.02
WDR48-208ENST00000466405 BECN1Q14457 450 aa8.69□□□□□ -1.02
WDR48-208ENST00000466405 CEP164Q9UPV0 1460 aa8.67□□□□□ -1.02
WDR48-208ENST00000466405 USP35Q9P2H5 1018 aa8.67□□□□□ -1.02
WDR48-208ENST00000466405 HSP90AA1P07900 732 aaKnown RBP8.67□□□□□ -1.02
WDR48-208ENST00000466405 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.67□□□□□ -1.02
WDR48-208ENST00000466405 TIMELESSQ9UNS1 1208 aa8.67□□□□□ -1.02
WDR48-208ENST00000466405 RSPH6AQ9H0K4 717 aa8.66□□□□□ -1.02
WDR48-208ENST00000466405 SOGA1O94964 1423 aa8.66□□□□□ -1.02
WDR48-208ENST00000466405 DHX57Q6P158 1386 aaKnown RBP8.65□□□□□ -1.02
WDR48-208ENST00000466405 CCNB3Q8WWL7 1395 aa8.65□□□□□ -1.02
WDR48-208ENST00000466405 SLC4A1APQ9BWU0 796 aaKnown RBP8.65□□□□□ -1.03
WDR48-208ENST00000466405 VPS8Q8N3P4 1428 aa8.64□□□□□ -1.03
WDR48-208ENST00000466405 MSH5O43196 834 aa8.64□□□□□ -1.03
WDR48-208ENST00000466405 L1TD1Q5T7N2 865 aaKnown RBP8.64□□□□□ -1.03
WDR48-208ENST00000466405 TCERG1O14776 1098 aaKnown RBP8.63□□□□□ -1.03
WDR48-208ENST00000466405 IL27Q8NEV9 243 aa8.63□□□□□ -1.03
WDR48-208ENST00000466405 VSIG10Q8N0Z9 540 aa8.62□□□□□ -1.03
WDR48-208ENST00000466405 ABCC9O60706 1549 aa8.62□□□□□ -1.03
WDR48-208ENST00000466405 GSE1Q14687 1217 aa8.61□□□□□ -1.03
WDR48-208ENST00000466405 PNNQ9H307 717 aaKnown RBP8.61□□□□□ -1.03
WDR48-208ENST00000466405 CHIC2Q9UKJ5 165 aa8.61□□□□□ -1.03
WDR48-208ENST00000466405 TNNT2P45379 298 aaPredicted RBP8.6□□□□□ -1.03
WDR48-208ENST00000466405 RGS3P49796 1198 aa8.59□□□□□ -1.03
WDR48-208ENST00000466405 RAB3GAP2Q9H2M9 1393 aa8.59□□□□□ -1.03
WDR48-208ENST00000466405 PABPN1Q86U42 306 aaKnown RBP eCLIP8.59□□□□□ -1.032e-8■■■□□ 17.7
WDR48-208ENST00000466405 SETD5Q9C0A6 1442 aa8.59□□□□□ -1.03
WDR48-208ENST00000466405 HSP90AA2PQ14568 343 aaPredicted RBP8.58□□□□□ -1.04
WDR48-208ENST00000466405 ARID4BQ4LE39 1312 aaPredicted RBP8.58□□□□□ -1.04
WDR48-208ENST00000466405 KANK4Q5T7N3 995 aaPredicted RBP8.58□□□□□ -1.04
WDR48-208ENST00000466405 PPP1R15AO75807 674 aaPredicted RBP8.58□□□□□ -1.04
WDR48-208ENST00000466405 PKNOX2Q96KN3 472 aa8.58□□□□□ -1.04
WDR48-208ENST00000466405 CCDC88BA6NC98 1476 aa8.57□□□□□ -1.04
WDR48-208ENST00000466405 PAK3O75914 559 aaPredicted RBP8.57□□□□□ -1.04
WDR48-208ENST00000466405 HSPA5P11021 654 aaKnown RBP8.57□□□□□ -1.04
WDR48-208ENST00000466405 NUDCQ9Y266 331 aa8.56□□□□□ -1.04
WDR48-208ENST00000466405 WDR43Q15061 677 aaKnown RBP eCLIP8.56□□□□□ -1.04
WDR48-208ENST00000466405 RRP7BPQ9NSQ0 103 aa8.55□□□□□ -1.04
WDR48-208ENST00000466405 PDE4AP27815 886 aa8.54□□□□□ -1.04
WDR48-208ENST00000466405 ABCC8Q09428 1581 aa8.54□□□□□ -1.04
WDR48-208ENST00000466405 MTUS2Q5JR59 1369 aa8.54□□□□□ -1.04
WDR48-208ENST00000466405 ARID3CA6NKF2 412 aa8.54□□□□□ -1.04
WDR48-208ENST00000466405 BRPF3Q9ULD4 1205 aa8.53□□□□□ -1.04
WDR48-208ENST00000466405 GOLGA6L22H0YM25 854 aa8.53□□□□□ -1.04
WDR48-208ENST00000466405 RCAN3Q9UKA8 241 aa8.52□□□□□ -1.05
WDR48-208ENST00000466405 ZBED9Q6R2W3 1325 aa8.51□□□□□ -1.05
WDR48-208ENST00000466405 UBE2Q2Q8WVN8 375 aa8.51□□□□□ -1.05
WDR48-208ENST00000466405 CECR2Q9BXF3 1484 aa8.51□□□□□ -1.05
WDR48-208ENST00000466405 GOLGA6L3A6NEY3 463 aa8.51□□□□□ -1.05
WDR48-208ENST00000466405 SLC4A3P48751 1232 aa8.51□□□□□ -1.05
WDR48-208ENST00000466405 SLKQ9H2G2 1235 aaPredicted RBP8.51□□□□□ -1.05
WDR48-208ENST00000466405 GZF1Q9H116 711 aaPredicted RBP8.5□□□□□ -1.05
WDR48-208ENST00000466405 NCLP19338 710 aaKnown RBP8.5□□□□□ -1.05
WDR48-208ENST00000466405 KDM2AQ9Y2K7 1162 aa8.5□□□□□ -1.05
WDR48-208ENST00000466405 MSNP26038 577 aaKnown RBP8.5□□□□□ -1.05
WDR48-208ENST00000466405 DNTTIP2Q5QJE6 756 aaKnown RBP8.49□□□□□ -1.05
WDR48-208ENST00000466405 BAZ1BQ9UIG0 1483 aaKnown RBP8.49□□□□□ -1.05
WDR48-208ENST00000466405 PTMAP06454 111 aaKnown RBP8.48□□□□□ -1.05
WDR48-208ENST00000466405 SPRYD3Q8NCJ5 442 aa8.48□□□□□ -1.05
WDR48-208ENST00000466405 ZNF777Q9ULD5 760 aaPredicted RBP8.48□□□□□ -1.05
WDR48-208ENST00000466405 NFKBIBQ15653 356 aa8.48□□□□□ -1.05
WDR48-208ENST00000466405 FRAT1Q92837 279 aaPredicted RBP8.48□□□□□ -1.05
WDR48-208ENST00000466405 MS4A1P11836 297 aa8.47□□□□□ -1.05
WDR48-208ENST00000466405 CDK11BP21127 795 aaKnown RBP8.46□□□□□ -1.06
WDR48-208ENST00000466405 EXOC6Q8TAG9 804 aa8.46□□□□□ -1.06
WDR48-208ENST00000466405 PRKRIP1Q9H875 184 aaPredicted RBP8.46□□□□□ -1.06
WDR48-208ENST00000466405 ARID3AQ99856 593 aa8.46□□□□□ -1.06
WDR48-208ENST00000466405 MROH2BQ7Z745 1585 aa8.45□□□□□ -1.06
WDR48-208ENST00000466405 FAM43AQ8N2R8 423 aa8.45□□□□□ -1.06
WDR48-208ENST00000466405 CARD11Q9BXL7 1154 aa8.45□□□□□ -1.06
WDR48-208ENST00000466405 MYH16Q9H6N6 1097 aa8.44□□□□□ -1.06
WDR48-208ENST00000466405 HSCBQ8IWL3 235 aa8.44□□□□□ -1.06
WDR48-208ENST00000466405 HSP90AB1P08238 724 aaKnown RBP8.43□□□□□ -1.06
WDR48-208ENST00000466405 RRP1P56182 461 aaKnown RBP8.43□□□□□ -1.06
WDR48-208ENST00000466405 RUSC2Q8N2Y8 1516 aa8.43□□□□□ -1.06
WDR48-208ENST00000466405 FAM161AQ3B820 660 aa8.42□□□□□ -1.06
WDR48-208ENST00000466405 KIF27Q86VH2 1401 aa8.42□□□□□ -1.06
WDR48-208ENST00000466405 PODXL2Q9NZ53 605 aa8.41□□□□□ -1.06
WDR48-208ENST00000466405 BAZ1AQ9NRL2 1556 aaPredicted RBP8.41□□□□□ -1.06
WDR48-208ENST00000466405 CC2D1BQ5T0F9 858 aaKnown RBP8.41□□□□□ -1.06
WDR48-208ENST00000466405 PDE3BQ13370 1112 aa8.4□□□□□ -1.06
WDR48-208ENST00000466405 AMER1Q5JTC6 1135 aaPredicted RBP8.39□□□□□ -1.07
WDR48-208ENST00000466405 GBP4Q96PP9 640 aa8.39□□□□□ -1.07
WDR48-208ENST00000466405 FHAD1B1AJZ9 1412 aa8.39□□□□□ -1.07
WDR48-208ENST00000466405 ARHGAP35Q9NRY4 1499 aa8.39□□□□□ -1.07
WDR48-208ENST00000466405 RAPGEF2Q9Y4G8 1499 aa8.39□□□□□ -1.07
WDR48-208ENST00000466405 RALBP1Q15311 655 aa8.38□□□□□ -1.07
WDR48-208ENST00000466405 CENPQQ7L2Z9 268 aaPredicted RBP8.38□□□□□ -1.07
WDR48-208ENST00000466405 PLIN1O60240 522 aa8.38□□□□□ -1.07
WDR48-208ENST00000466405 KNSTRNQ9Y448 316 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms