RNA–Protein interactions for RNA: ENST00000466321.5

TMEM39B-204, Transcript of transmembrane protein 39B, humanhuman

TSL 5

Gene TMEM39B, Length 770 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39B-204ENST00000466321 CARMIL1Q5VZK9 1371 aa31.46■■■□□ 2.63
TMEM39B-204ENST00000466321 JPH4Q96JJ6 628 aa31.44■■■□□ 2.62
TMEM39B-204ENST00000466321 TRHP20396 242 aaPredicted RBP31.41■■■□□ 2.62
TMEM39B-204ENST00000466321 KIAA0586Q9BVV6 1533 aa31.35■■■□□ 2.61
TMEM39B-204ENST00000466321 RAPGEF2Q9Y4G8 1499 aa31.22■■■□□ 2.59
TMEM39B-204ENST00000466321 IQGAP2Q13576 1575 aa31.17■■■□□ 2.58
TMEM39B-204ENST00000466321 TTBK1Q5TCY1 1321 aaPredicted RBP31.16■■■□□ 2.58
TMEM39B-204ENST00000466321 ADCY10Q96PN6 1610 aa31.05■■■□□ 2.56
TMEM39B-204ENST00000466321 PRXQ9BXM0 1461 aa31.02■■■□□ 2.56
TMEM39B-204ENST00000466321 CARMIL2Q6F5E8 1435 aa31.02■■■□□ 2.56
TMEM39B-204ENST00000466321 PTPRGP23470 1445 aa31.01■■■□□ 2.55
TMEM39B-204ENST00000466321 DISP1Q96F81 1524 aa31■■■□□ 2.55
TMEM39B-204ENST00000466321 TNIKQ9UKE5 1360 aa30.98■■■□□ 2.55
TMEM39B-204ENST00000466321 UGGT2Q9NYU1 1516 aa30.96■■■□□ 2.55
TMEM39B-204ENST00000466321 CTTNBP2Q8WZ74 1663 aa30.96■■■□□ 2.55
TMEM39B-204ENST00000466321 FAM9AQ8IZU1 332 aaPredicted RBP30.93■■■□□ 2.54
TMEM39B-204ENST00000466321 NPM1P06748 294 aaKnown RBP eCLIP30.92■■■□□ 2.54
TMEM39B-204ENST00000466321 CSRNP3Q8WYN3 585 aa30.91■■■□□ 2.54
TMEM39B-204ENST00000466321 KIAA0556O60303 1618 aa30.89■■■□□ 2.54
TMEM39B-204ENST00000466321 KIF13AQ9H1H9 1805 aa30.85■■■□□ 2.53
TMEM39B-204ENST00000466321 CHIC1Q5VXU3 224 aa30.85■■■□□ 2.53
TMEM39B-204ENST00000466321 MAPKBP1O60336 1514 aa30.83■■■□□ 2.53
TMEM39B-204ENST00000466321 EEA1Q15075 1411 aa30.8■■■□□ 2.52
TMEM39B-204ENST00000466321 UACAQ9BZF9 1416 aa30.78■■■□□ 2.52
TMEM39B-204ENST00000466321 FAM69CQ0P6D2 419 aa30.77■■■□□ 2.52
TMEM39B-204ENST00000466321 ABCC2Q92887 1545 aa30.77■■■□□ 2.52
TMEM39B-204ENST00000466321 ABCC10Q5T3U5 1492 aa30.76■■■□□ 2.52
TMEM39B-204ENST00000466321 DIP2BQ9P265 1576 aa30.75■■■□□ 2.51
TMEM39B-204ENST00000466321 UHRF1BP1LA0JNW5 1464 aa30.72■■■□□ 2.51
TMEM39B-204ENST00000466321 GOLGA3Q08378 1498 aa30.72■■■□□ 2.51
TMEM39B-204ENST00000466321 P3H3Q8IVL6 736 aa30.69■■■□□ 2.5
TMEM39B-204ENST00000466321 EHMT2Q96KQ7 1210 aa30.68■■■□□ 2.5
TMEM39B-204ENST00000466321 PLB1Q6P1J6 1458 aa30.68■■■□□ 2.5
TMEM39B-204ENST00000466321 RANGAP1P46060 587 aaPredicted RBP30.66■■■□□ 2.5
TMEM39B-204ENST00000466321 ASXL2Q76L83 1435 aa30.65■■■□□ 2.5
TMEM39B-204ENST00000466321 ZCCHC11Q5TAX3 1644 aaKnown RBP30.61■■■□□ 2.49
TMEM39B-204ENST00000466321 KDM5BQ9UGL1 1544 aa30.6■■■□□ 2.49
TMEM39B-204ENST00000466321 KIF21BO75037 1637 aa30.58■■■□□ 2.49
TMEM39B-204ENST00000466321 TSPOAP1O95153 1857 aa30.57■■■□□ 2.48
TMEM39B-204ENST00000466321 ABCA8O94911 1581 aa30.56■■■□□ 2.48
TMEM39B-204ENST00000466321 SAMD9Q5K651 1589 aa30.54■■■□□ 2.48
TMEM39B-204ENST00000466321 ARID3CA6NKF2 412 aa30.52■■■□□ 2.48
TMEM39B-204ENST00000466321 EPRSP07814 1512 aaKnown RBP30.45■■■□□ 2.47
TMEM39B-204ENST00000466321 FHOD3Q2V2M9 1422 aa30.45■■■□□ 2.46
TMEM39B-204ENST00000466321 GLI2P10070 1586 aa30.42■■■□□ 2.46
TMEM39B-204ENST00000466321 UBTFP17480 764 aaKnown RBP30.41■■■□□ 2.46
TMEM39B-204ENST00000466321 WDR7Q9Y4E6 1490 aa30.41■■■□□ 2.46
TMEM39B-204ENST00000466321 PPRC1Q5VV67 1664 aaKnown RBP30.37■■■□□ 2.45
TMEM39B-204ENST00000466321 KDM6BO15054 1643 aa30.35■■■□□ 2.45
TMEM39B-204ENST00000466321 RAPGEF6Q8TEU7 1601 aa30.34■■■□□ 2.45
TMEM39B-204ENST00000466321 KCNH8Q96L42 1107 aa30.34■■■□□ 2.45
TMEM39B-204ENST00000466321 ATP10BO94823 1461 aa30.32■■■□□ 2.44
TMEM39B-204ENST00000466321 MAP3K4Q9Y6R4 1608 aa30.32■■■□□ 2.44
TMEM39B-204ENST00000466321 EFCAB5A4FU69 1503 aa30.3■■■□□ 2.44
TMEM39B-204ENST00000466321 NUP153P49790 1475 aaKnown RBP30.25■■■□□ 2.43
TMEM39B-204ENST00000466321 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.23■■■□□ 2.43
TMEM39B-204ENST00000466321 HNRNPUL2Q1KMD3 747 aaKnown RBP30.23■■■□□ 2.43
TMEM39B-204ENST00000466321 ARHGAP35Q9NRY4 1499 aa30.18■■■□□ 2.42
TMEM39B-204ENST00000466321 CD109Q6YHK3 1445 aa30.17■■■□□ 2.42
TMEM39B-204ENST00000466321 TEX14Q8IWB6 1497 aa30.16■■■□□ 2.42
TMEM39B-204ENST00000466321 COL17A1Q9UMD9 1497 aaPredicted RBP30.16■■■□□ 2.42
TMEM39B-204ENST00000466321 CFAP43Q8NDM7 1665 aa30.14■■■□□ 2.42
TMEM39B-204ENST00000466321 CDK13Q14004 1512 aaKnown RBP30.07■■■□□ 2.4
TMEM39B-204ENST00000466321 MAGI3Q5TCQ9 1506 aa30.07■■■□□ 2.4
TMEM39B-204ENST00000466321 ATP1B4Q9UN42 357 aaPredicted RBP30.07■■■□□ 2.4
TMEM39B-204ENST00000466321 AEBP2Q6ZN18 517 aaPredicted RBP30.06■■■□□ 2.4
TMEM39B-204ENST00000466321 ABCA9Q8IUA7 1624 aa30.03■■■□□ 2.4
TMEM39B-204ENST00000466321 FMN1Q68DA7 1419 aa30.02■■■□□ 2.4
TMEM39B-204ENST00000466321 PLEKHD1A6NEE1 506 aa29.98■■■□□ 2.39
TMEM39B-204ENST00000466321 HECW1Q76N89 1606 aa29.96■■■□□ 2.39
TMEM39B-204ENST00000466321 TTC37Q6PGP7 1564 aa29.88■■■□□ 2.37
TMEM39B-204ENST00000466321 CLIP1P30622 1438 aa29.88■■■□□ 2.37
TMEM39B-204ENST00000466321 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.87■■■□□ 2.37
TMEM39B-204ENST00000466321 PCF11O94913 1555 aaKnown RBP29.87■■■□□ 2.37
TMEM39B-204ENST00000466321 LRRIQ1Q96JM4 1722 aa29.85■■■□□ 2.37
TMEM39B-204ENST00000466321 KDM4FA0A1W2PPD8 638 aa29.85■■■□□ 2.37
TMEM39B-204ENST00000466321 ARAP3Q8WWN8 1544 aa29.82■■■□□ 2.36
TMEM39B-204ENST00000466321 RAPGEF3O95398 923 aa29.79■■■□□ 2.36
TMEM39B-204ENST00000466321 NEO1Q92859 1461 aa29.79■■■□□ 2.36
TMEM39B-204ENST00000466321 CASKIN1Q8WXD9 1431 aa29.78■■■□□ 2.36
TMEM39B-204ENST00000466321 KIF14Q15058 1648 aa29.77■■■□□ 2.36
TMEM39B-204ENST00000466321 ADGRL1O94910 1474 aa29.75■■■□□ 2.35
TMEM39B-204ENST00000466321 FANCAO15360 1455 aa29.74■■■□□ 2.35
TMEM39B-204ENST00000466321 CDK11AQ9UQ88 783 aaPredicted RBP29.73■■■□□ 2.35
TMEM39B-204ENST00000466321 PHLDB1Q86UU1 1377 aa29.73■■■□□ 2.35
TMEM39B-204ENST00000466321 FRMPD1Q5SYB0 1578 aa29.72■■■□□ 2.35
TMEM39B-204ENST00000466321 TROQ12816 1431 aaPredicted RBP29.71■■■□□ 2.35
TMEM39B-204ENST00000466321 AKNAQ7Z591 1439 aa29.7■■■□□ 2.34
TMEM39B-204ENST00000466321 FYCO1Q9BQS8 1478 aa29.69■■■□□ 2.34
TMEM39B-204ENST00000466321 LOC105371045A0A1W2PR82 267 aa29.68■■■□□ 2.34
TMEM39B-204ENST00000466321 CEP162Q5TB80 1403 aa29.68■■■□□ 2.34
TMEM39B-204ENST00000466321 CCDC18Q5T9S5 1454 aa29.67■■■□□ 2.34
TMEM39B-204ENST00000466321 CFAP74Q9C0B2 1584 aa29.65■■■□□ 2.34
TMEM39B-204ENST00000466321 PLCH2O75038 1416 aa29.64■■■□□ 2.34
TMEM39B-204ENST00000466321 DENND4BO75064 1496 aaPredicted RBP29.63■■■□□ 2.33
TMEM39B-204ENST00000466321 MYO5CQ9NQX4 1742 aa29.62■■■□□ 2.33
TMEM39B-204ENST00000466321 RICTORQ6R327 1708 aa29.59■■■□□ 2.33
TMEM39B-204ENST00000466321 ARHGAP5Q13017 1502 aa29.55■■■□□ 2.32
TMEM39B-204ENST00000466321 SCAPERQ9BY12 1400 aa29.54■■■□□ 2.32
TMEM39B-204ENST00000466321 EFCAB2Q5VUJ9 269 aa29.53■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms