RNA–Protein interactions for RNA: ENST00000466205.5

CD40-204, Transcript of CD40 molecule, humanhuman

TSL 1 (best)

Gene CD40, Length 822 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-204ENST00000466205 PRG4Q92954 1404 aaPredicted RBP17.24■□□□□ 0.35
CD40-204ENST00000466205 JPH4Q96JJ6 628 aa17.24■□□□□ 0.35
CD40-204ENST00000466205 KIAA0586Q9BVV6 1533 aa17.2■□□□□ 0.34
CD40-204ENST00000466205 RAPGEF2Q9Y4G8 1499 aa17.18■□□□□ 0.34
CD40-204ENST00000466205 TTBK1Q5TCY1 1321 aaPredicted RBP17.16■□□□□ 0.34
CD40-204ENST00000466205 TRHP20396 242 aaPredicted RBP17.15■□□□□ 0.34
CD40-204ENST00000466205 FAM9AQ8IZU1 332 aaPredicted RBP17.15■□□□□ 0.34
CD40-204ENST00000466205 IQGAP2Q13576 1575 aa17.12■□□□□ 0.33
CD40-204ENST00000466205 CHIC1Q5VXU3 224 aa17.1■□□□□ 0.33
CD40-204ENST00000466205 PRXQ9BXM0 1461 aa17.07■□□□□ 0.32
CD40-204ENST00000466205 CSRNP3Q8WYN3 585 aa17.07■□□□□ 0.32
CD40-204ENST00000466205 CTTNBP2Q8WZ74 1663 aa17.04■□□□□ 0.32
CD40-204ENST00000466205 CARMIL2Q6F5E8 1435 aa17.03■□□□□ 0.32
CD40-204ENST00000466205 EHMT2Q96KQ7 1210 aa17.02■□□□□ 0.32
CD40-204ENST00000466205 DISP1Q96F81 1524 aa17.01■□□□□ 0.31
CD40-204ENST00000466205 PTPRGP23470 1445 aa17■□□□□ 0.31
CD40-204ENST00000466205 TNIKQ9UKE5 1360 aa17■□□□□ 0.31
CD40-204ENST00000466205 ADCY10Q96PN6 1610 aa16.99■□□□□ 0.31
CD40-204ENST00000466205 EEA1Q15075 1411 aa16.99■□□□□ 0.31
CD40-204ENST00000466205 UGGT2Q9NYU1 1516 aa16.99■□□□□ 0.31
CD40-204ENST00000466205 KIAA0556O60303 1618 aa16.97■□□□□ 0.31
CD40-204ENST00000466205 RANGAP1P46060 587 aaPredicted RBP16.96■□□□□ 0.31
CD40-204ENST00000466205 NPM1P06748 294 aaKnown RBP eCLIP16.95■□□□□ 0.3
CD40-204ENST00000466205 P3H3Q8IVL6 736 aa16.92■□□□□ 0.3
CD40-204ENST00000466205 UACAQ9BZF9 1416 aa16.88■□□□□ 0.29
CD40-204ENST00000466205 GOLGA3Q08378 1498 aa16.88■□□□□ 0.29
CD40-204ENST00000466205 KIF21BO75037 1637 aa16.88■□□□□ 0.29
CD40-204ENST00000466205 PLB1Q6P1J6 1458 aa16.85■□□□□ 0.29
CD40-204ENST00000466205 MAPKBP1O60336 1514 aa16.85■□□□□ 0.29
CD40-204ENST00000466205 ABCC2Q92887 1545 aa16.85■□□□□ 0.29
CD40-204ENST00000466205 FAM69CQ0P6D2 419 aa16.84■□□□□ 0.29
CD40-204ENST00000466205 KIF13AQ9H1H9 1805 aa16.84■□□□□ 0.29
CD40-204ENST00000466205 UHRF1BP1LA0JNW5 1464 aa16.82■□□□□ 0.28
CD40-204ENST00000466205 UBTFP17480 764 aaKnown RBP16.82■□□□□ 0.28
CD40-204ENST00000466205 ABCC10Q5T3U5 1492 aa16.81■□□□□ 0.28
CD40-204ENST00000466205 ARID3CA6NKF2 412 aa16.81■□□□□ 0.28
CD40-204ENST00000466205 DIP2BQ9P265 1576 aa16.81■□□□□ 0.28
CD40-204ENST00000466205 ZCCHC11Q5TAX3 1644 aaKnown RBP16.79■□□□□ 0.28
CD40-204ENST00000466205 SAMD9Q5K651 1589 aa16.79■□□□□ 0.28
CD40-204ENST00000466205 FHOD3Q2V2M9 1422 aa16.78■□□□□ 0.28
CD40-204ENST00000466205 ASXL2Q76L83 1435 aa16.78■□□□□ 0.28
CD40-204ENST00000466205 ABCA8O94911 1581 aa16.77■□□□□ 0.28
CD40-204ENST00000466205 KDM5BQ9UGL1 1544 aa16.76■□□□□ 0.27
CD40-204ENST00000466205 TSPOAP1O95153 1857 aa16.72■□□□□ 0.27
CD40-204ENST00000466205 RAPGEF6Q8TEU7 1601 aa16.68■□□□□ 0.26
CD40-204ENST00000466205 EFCAB5A4FU69 1503 aa16.68■□□□□ 0.26
CD40-204ENST00000466205 EPRSP07814 1512 aaKnown RBP16.67■□□□□ 0.26
CD40-204ENST00000466205 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.67■□□□□ 0.26
CD40-204ENST00000466205 HNRNPUL2Q1KMD3 747 aaKnown RBP16.67■□□□□ 0.26
CD40-204ENST00000466205 KCNH8Q96L42 1107 aa16.67■□□□□ 0.26
CD40-204ENST00000466205 WDR7Q9Y4E6 1490 aa16.67■□□□□ 0.26
CD40-204ENST00000466205 ATP10BO94823 1461 aa16.65■□□□□ 0.26
CD40-204ENST00000466205 ARHGAP35Q9NRY4 1499 aa16.64■□□□□ 0.25
CD40-204ENST00000466205 GLI2P10070 1586 aa16.64■□□□□ 0.25
CD40-204ENST00000466205 ATP1B4Q9UN42 357 aaPredicted RBP16.62■□□□□ 0.25
CD40-204ENST00000466205 NUP153P49790 1475 aaKnown RBP16.61■□□□□ 0.25
CD40-204ENST00000466205 PPRC1Q5VV67 1664 aaKnown RBP16.6■□□□□ 0.25
CD40-204ENST00000466205 KDM6BO15054 1643 aa16.59■□□□□ 0.25
CD40-204ENST00000466205 MAP3K4Q9Y6R4 1608 aa16.59■□□□□ 0.25
CD40-204ENST00000466205 CDK13Q14004 1512 aaKnown RBP16.55■□□□□ 0.24
CD40-204ENST00000466205 CD109Q6YHK3 1445 aa16.53■□□□□ 0.24
CD40-204ENST00000466205 FMN1Q68DA7 1419 aa16.53■□□□□ 0.24
CD40-204ENST00000466205 CFAP43Q8NDM7 1665 aa16.52■□□□□ 0.23
CD40-204ENST00000466205 TEX14Q8IWB6 1497 aa16.5■□□□□ 0.23
CD40-204ENST00000466205 HECW1Q76N89 1606 aa16.5■□□□□ 0.23
CD40-204ENST00000466205 CLIP1P30622 1438 aa16.5■□□□□ 0.23
CD40-204ENST00000466205 LOC105371045A0A1W2PR82 267 aa16.49■□□□□ 0.23
CD40-204ENST00000466205 PLEKHD1A6NEE1 506 aa16.49■□□□□ 0.23
CD40-204ENST00000466205 COL17A1Q9UMD9 1497 aaPredicted RBP16.48■□□□□ 0.23
CD40-204ENST00000466205 PCF11O94913 1555 aaKnown RBP16.47■□□□□ 0.23
CD40-204ENST00000466205 ABCA9Q8IUA7 1624 aa16.46■□□□□ 0.23
CD40-204ENST00000466205 MAGI3Q5TCQ9 1506 aa16.45■□□□□ 0.22
CD40-204ENST00000466205 LRRIQ1Q96JM4 1722 aa16.45■□□□□ 0.22
CD40-204ENST00000466205 AEBP2Q6ZN18 517 aaPredicted RBP16.44■□□□□ 0.22
CD40-204ENST00000466205 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.41■□□□□ 0.22
CD40-204ENST00000466205 CEP162Q5TB80 1403 aa16.41■□□□□ 0.22
CD40-204ENST00000466205 TTC37Q6PGP7 1564 aa16.41■□□□□ 0.22
CD40-204ENST00000466205 CASKIN1Q8WXD9 1431 aa16.4■□□□□ 0.22
CD40-204ENST00000466205 KIF14Q15058 1648 aa16.37■□□□□ 0.21
CD40-204ENST00000466205 CDK11AQ9UQ88 783 aaPredicted RBP16.36■□□□□ 0.21
CD40-204ENST00000466205 FYCO1Q9BQS8 1478 aa16.35■□□□□ 0.21
CD40-204ENST00000466205 TROQ12816 1431 aaPredicted RBP16.34■□□□□ 0.21
CD40-204ENST00000466205 CCDC18Q5T9S5 1454 aa16.34■□□□□ 0.21
CD40-204ENST00000466205 RAPGEF3O95398 923 aa16.33■□□□□ 0.2
CD40-204ENST00000466205 FANCAO15360 1455 aa16.32■□□□□ 0.2
CD40-204ENST00000466205 NEO1Q92859 1461 aa16.31■□□□□ 0.2
CD40-204ENST00000466205 ARAP3Q8WWN8 1544 aa16.3■□□□□ 0.2
CD40-204ENST00000466205 AKNAQ7Z591 1439 aa16.29■□□□□ 0.2
CD40-204ENST00000466205 MYO5CQ9NQX4 1742 aa16.28■□□□□ 0.2
CD40-204ENST00000466205 PLCH2O75038 1416 aa16.28■□□□□ 0.2
CD40-204ENST00000466205 FRMPD1Q5SYB0 1578 aa16.27■□□□□ 0.2
CD40-204ENST00000466205 CFAP74Q9C0B2 1584 aa16.27■□□□□ 0.2
CD40-204ENST00000466205 PHLDB1Q86UU1 1377 aa16.26■□□□□ 0.19
CD40-204ENST00000466205 KDM4FA0A1W2PPD8 638 aa16.26■□□□□ 0.19
CD40-204ENST00000466205 ARHGAP5Q13017 1502 aa16.25■□□□□ 0.19
CD40-204ENST00000466205 DENND4BO75064 1496 aaPredicted RBP16.24■□□□□ 0.19
CD40-204ENST00000466205 ADGRL1O94910 1474 aa16.23■□□□□ 0.19
CD40-204ENST00000466205 SCAPERQ9BY12 1400 aa16.22■□□□□ 0.19
CD40-204ENST00000466205 EFCAB2Q5VUJ9 269 aa16.22■□□□□ 0.19
CD40-204ENST00000466205 RICTORQ6R327 1708 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 187.1 ms