RNA–Protein interactions for RNA: ENST00000465721.1

CNOT4-208, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 4

Gene CNOT4, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-208ENST00000465721 PRG4Q92954 1404 aaPredicted RBP21.23■□□□□ 0.99
CNOT4-208ENST00000465721 ADCY10Q96PN6 1610 aa21.15■□□□□ 0.98
CNOT4-208ENST00000465721 MAPKBP1O60336 1514 aa21.14■□□□□ 0.98
CNOT4-208ENST00000465721 DIP2BQ9P265 1576 aa21.14■□□□□ 0.97
CNOT4-208ENST00000465721 JPH4Q96JJ6 628 aa21.13■□□□□ 0.97
CNOT4-208ENST00000465721 ABCC10Q5T3U5 1492 aa21.11■□□□□ 0.97
CNOT4-208ENST00000465721 CUL7Q14999 1698 aa21.1■□□□□ 0.97
CNOT4-208ENST00000465721 KIAA0586Q9BVV6 1533 aa21.04■□□□□ 0.96
CNOT4-208ENST00000465721 TSPOAP1O95153 1857 aa21.03■□□□□ 0.96
CNOT4-208ENST00000465721 FAM69CQ0P6D2 419 aa20.99■□□□□ 0.95
CNOT4-208ENST00000465721 KDM6BO15054 1643 aa20.98■□□□□ 0.95
CNOT4-208ENST00000465721 IGF1RP08069 1367 aa20.97■□□□□ 0.95
CNOT4-208ENST00000465721 KIF27Q86VH2 1401 aa20.96■□□□□ 0.95
CNOT4-208ENST00000465721 NPM1P06748 294 aaKnown RBP eCLIP20.93■□□□□ 0.94
CNOT4-208ENST00000465721 PPRC1Q5VV67 1664 aaKnown RBP20.89■□□□□ 0.93
CNOT4-208ENST00000465721 PHF23Q9BUL5 403 aaPredicted RBP20.88■□□□□ 0.93
CNOT4-208ENST00000465721 IQGAP2Q13576 1575 aa20.86■□□□□ 0.93
CNOT4-208ENST00000465721 ABCC2Q92887 1545 aa20.84■□□□□ 0.93
CNOT4-208ENST00000465721 PTPRGP23470 1445 aa20.83■□□□□ 0.93
CNOT4-208ENST00000465721 CARMIL1Q5VZK9 1371 aa20.82■□□□□ 0.92
CNOT4-208ENST00000465721 GLI2P10070 1586 aa20.81■□□□□ 0.92
CNOT4-208ENST00000465721 TNIKQ9UKE5 1360 aa20.8■□□□□ 0.92
CNOT4-208ENST00000465721 CARMIL2Q6F5E8 1435 aa20.78■□□□□ 0.92
CNOT4-208ENST00000465721 UHRF1BP1LA0JNW5 1464 aa20.78■□□□□ 0.92
CNOT4-208ENST00000465721 ASXL2Q76L83 1435 aa20.78■□□□□ 0.92
CNOT4-208ENST00000465721 KDM4FA0A1W2PPD8 638 aa20.77■□□□□ 0.92
CNOT4-208ENST00000465721 DISP1Q96F81 1524 aa20.77■□□□□ 0.92
CNOT4-208ENST00000465721 PLB1Q6P1J6 1458 aa20.75■□□□□ 0.91
CNOT4-208ENST00000465721 MAP3K4Q9Y6R4 1608 aa20.74■□□□□ 0.91
CNOT4-208ENST00000465721 ZCCHC11Q5TAX3 1644 aaKnown RBP20.72■□□□□ 0.91
CNOT4-208ENST00000465721 UGGT2Q9NYU1 1516 aa20.71■□□□□ 0.91
CNOT4-208ENST00000465721 TTBK1Q5TCY1 1321 aaPredicted RBP20.71■□□□□ 0.91
CNOT4-208ENST00000465721 KIAA0556O60303 1618 aa20.71■□□□□ 0.91
CNOT4-208ENST00000465721 UACAQ9BZF9 1416 aa20.7■□□□□ 0.9
CNOT4-208ENST00000465721 KDM5BQ9UGL1 1544 aa20.69■□□□□ 0.9
CNOT4-208ENST00000465721 SENP3Q9H4L4 574 aaPredicted RBP20.68■□□□□ 0.9
CNOT4-208ENST00000465721 EPRSP07814 1512 aaKnown RBP20.67■□□□□ 0.9
CNOT4-208ENST00000465721 CTTNBP2Q8WZ74 1663 aa20.67■□□□□ 0.9
CNOT4-208ENST00000465721 RAPGEF2Q9Y4G8 1499 aa20.64■□□□□ 0.89
CNOT4-208ENST00000465721 ADGRL1O94910 1474 aa20.63■□□□□ 0.89
CNOT4-208ENST00000465721 COL17A1Q9UMD9 1497 aaPredicted RBP20.62■□□□□ 0.89
CNOT4-208ENST00000465721 TEX14Q8IWB6 1497 aa20.58■□□□□ 0.89
CNOT4-208ENST00000465721 WDR7Q9Y4E6 1490 aa20.56■□□□□ 0.88
CNOT4-208ENST00000465721 CFAP43Q8NDM7 1665 aa20.54■□□□□ 0.88
CNOT4-208ENST00000465721 ABCA8O94911 1581 aa20.51■□□□□ 0.87
CNOT4-208ENST00000465721 HECW2Q9P2P5 1572 aa20.46■□□□□ 0.87
CNOT4-208ENST00000465721 GOLGA3Q08378 1498 aa20.45■□□□□ 0.86
CNOT4-208ENST00000465721 MAGI3Q5TCQ9 1506 aa20.45■□□□□ 0.86
CNOT4-208ENST00000465721 KIF21BO75037 1637 aa20.4■□□□□ 0.86
CNOT4-208ENST00000465721 PRXQ9BXM0 1461 aa20.4■□□□□ 0.86
CNOT4-208ENST00000465721 CD109Q6YHK3 1445 aa20.39■□□□□ 0.85
CNOT4-208ENST00000465721 ILDR1Q86SU0 546 aaPredicted RBP20.38■□□□□ 0.85
CNOT4-208ENST00000465721 ABCA9Q8IUA7 1624 aa20.31■□□□□ 0.84
CNOT4-208ENST00000465721 SAMD9Q5K651 1589 aa20.3■□□□□ 0.84
CNOT4-208ENST00000465721 ARAP3Q8WWN8 1544 aa20.3■□□□□ 0.84
CNOT4-208ENST00000465721 KCNH8Q96L42 1107 aa20.28■□□□□ 0.84
CNOT4-208ENST00000465721 ATP10BO94823 1461 aa20.26■□□□□ 0.83
CNOT4-208ENST00000465721 RAPGEF6Q8TEU7 1601 aa20.25■□□□□ 0.83
CNOT4-208ENST00000465721 ADAMTSL3P82987 1691 aa20.24■□□□□ 0.83
CNOT4-208ENST00000465721 FRMPD1Q5SYB0 1578 aa20.22■□□□□ 0.83
CNOT4-208ENST00000465721 BCORL1Q5H9F3 1711 aa20.17■□□□□ 0.82
CNOT4-208ENST00000465721 ARID3CA6NKF2 412 aa20.17■□□□□ 0.82
CNOT4-208ENST00000465721 NEO1Q92859 1461 aa20.16■□□□□ 0.82
CNOT4-208ENST00000465721 PHLDB1Q86UU1 1377 aa20.15■□□□□ 0.82
CNOT4-208ENST00000465721 P3H3Q8IVL6 736 aa20.14■□□□□ 0.81
CNOT4-208ENST00000465721 MADDQ8WXG6 1647 aa20.13■□□□□ 0.81
CNOT4-208ENST00000465721 PTPRMP28827 1452 aa20.13■□□□□ 0.81
CNOT4-208ENST00000465721 NUP153P49790 1475 aaKnown RBP20.13■□□□□ 0.81
CNOT4-208ENST00000465721 RICTORQ6R327 1708 aa20.13■□□□□ 0.81
CNOT4-208ENST00000465721 ARHGEF40Q8TER5 1519 aa20.11■□□□□ 0.81
CNOT4-208ENST00000465721 RAPGEF3O95398 923 aa20.06■□□□□ 0.8
CNOT4-208ENST00000465721 FAM9AQ8IZU1 332 aaPredicted RBP20.06■□□□□ 0.8
CNOT4-208ENST00000465721 CFAP74Q9C0B2 1584 aa20.06■□□□□ 0.8
CNOT4-208ENST00000465721 RIMS1Q86UR5 1692 aaKnown RBP20.06■□□□□ 0.8
CNOT4-208ENST00000465721 FHOD3Q2V2M9 1422 aa20.05■□□□□ 0.8
CNOT4-208ENST00000465721 PCF11O94913 1555 aaKnown RBP20.04■□□□□ 0.8
CNOT4-208ENST00000465721 CSRNP3Q8WYN3 585 aa20.04■□□□□ 0.8
CNOT4-208ENST00000465721 TTC37Q6PGP7 1564 aa20.04■□□□□ 0.8
CNOT4-208ENST00000465721 SIGLEC1Q9BZZ2 1709 aa20.03■□□□□ 0.8
CNOT4-208ENST00000465721 ZMYM4Q5VZL5 1548 aa20.01■□□□□ 0.79
CNOT4-208ENST00000465721 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.01■□□□□ 0.79
CNOT4-208ENST00000465721 LMTK3Q96Q04 1460 aa20■□□□□ 0.79
CNOT4-208ENST00000465721 EFCAB5A4FU69 1503 aa20■□□□□ 0.79
CNOT4-208ENST00000465721 EEA1Q15075 1411 aa20■□□□□ 0.79
CNOT4-208ENST00000465721 DENND4BO75064 1496 aaPredicted RBP19.99■□□□□ 0.79
CNOT4-208ENST00000465721 FANCAO15360 1455 aa19.97■□□□□ 0.79
CNOT4-208ENST00000465721 AKNAQ7Z591 1439 aa19.96■□□□□ 0.79
CNOT4-208ENST00000465721 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.96■□□□□ 0.79
CNOT4-208ENST00000465721 HNRNPUL2Q1KMD3 747 aaKnown RBP19.96■□□□□ 0.79
CNOT4-208ENST00000465721 FER1L4A9Z1Z3 1794 aa19.94■□□□□ 0.78
CNOT4-208ENST00000465721 FBXO41Q8TF61 875 aa19.94■□□□□ 0.78
CNOT4-208ENST00000465721 ZFYVE16Q7Z3T8 1539 aa19.93■□□□□ 0.78
CNOT4-208ENST00000465721 CDK13Q14004 1512 aaKnown RBP19.92■□□□□ 0.78
CNOT4-208ENST00000465721 ARID4BQ4LE39 1312 aaPredicted RBP19.92■□□□□ 0.78
CNOT4-208ENST00000465721 HECW1Q76N89 1606 aa19.91■□□□□ 0.78
CNOT4-208ENST00000465721 YEATS2Q9ULM3 1422 aa19.9■□□□□ 0.78
CNOT4-208ENST00000465721 PLEKHD1A6NEE1 506 aa19.89■□□□□ 0.77
CNOT4-208ENST00000465721 RANGAP1P46060 587 aaPredicted RBP19.89■□□□□ 0.77
CNOT4-208ENST00000465721 MYO5CQ9NQX4 1742 aa19.89■□□□□ 0.77
CNOT4-208ENST00000465721 MAGI2Q86UL8 1455 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms