RNA–Protein interactions for RNA: ENST00000465703.5

SKIV2L-204, Transcript of Ski2 like RNA helicase, humanhuman

TSL 1 (best)

Gene SKIV2L, Length 4,507 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKIV2L-204ENST00000465703 WDR43Q15061 677 aaKnown RBP eCLIP20.07■□□□□ 0.8
SKIV2L-204ENST00000465703 HIRIP3Q9BW71 556 aaPredicted RBP20.06■□□□□ 0.8
SKIV2L-204ENST00000465703 RB1CC1Q8TDY2 1594 aa20.06■□□□□ 0.8
SKIV2L-204ENST00000465703 SALL2Q9Y467 1007 aaPredicted RBP20.05■□□□□ 0.8
SKIV2L-204ENST00000465703 ZNF777Q9ULD5 760 aaPredicted RBP20.04■□□□□ 0.8
SKIV2L-204ENST00000465703 WRNQ14191 1432 aaPredicted RBP eCLIP20.01■□□□□ 0.79
SKIV2L-204ENST00000465703 TSHZ2Q9NRE2 1034 aa19.99■□□□□ 0.79
SKIV2L-204ENST00000465703 CHIC2Q9UKJ5 165 aa19.99■□□□□ 0.79
SKIV2L-204ENST00000465703 TRIM44Q96DX7 344 aaPredicted RBP19.98■□□□□ 0.79
SKIV2L-204ENST00000465703 DEKP35659 375 aaKnown RBP19.98■□□□□ 0.79
SKIV2L-204ENST00000465703 ARID3CA6NKF2 412 aa19.93■□□□□ 0.78
SKIV2L-204ENST00000465703 CCNB3Q8WWL7 1395 aa19.92■□□□□ 0.78
SKIV2L-204ENST00000465703 GOLGA6L22H0YM25 854 aa19.91■□□□□ 0.78
SKIV2L-204ENST00000465703 TSPY4P0CV99 314 aa19.88■□□□□ 0.77
SKIV2L-204ENST00000465703 TSPY10P0CW01 314 aa19.88■□□□□ 0.77
SKIV2L-204ENST00000465703 ARXQ96QS3 562 aa19.86■□□□□ 0.77
SKIV2L-204ENST00000465703 VPS8Q8N3P4 1428 aa19.85■□□□□ 0.77
SKIV2L-204ENST00000465703 B4GALNT3Q6L9W6 998 aa19.85■□□□□ 0.77
SKIV2L-204ENST00000465703 FBLN2P98095 1184 aa19.84■□□□□ 0.77
SKIV2L-204ENST00000465703 KIF27Q86VH2 1401 aa19.84■□□□□ 0.77
SKIV2L-204ENST00000465703 SIN3AQ96ST3 1273 aa19.83■□□□□ 0.77
SKIV2L-204ENST00000465703 RRP7BPQ9NSQ0 103 aa19.83■□□□□ 0.76
SKIV2L-204ENST00000465703 LAS1LQ9Y4W2 734 aaKnown RBP19.83■□□□□ 0.76
SKIV2L-204ENST00000465703 TNNT2P45379 298 aaPredicted RBP19.82■□□□□ 0.76
SKIV2L-204ENST00000465703 KDM2AQ9Y2K7 1162 aa19.8■□□□□ 0.76
SKIV2L-204ENST00000465703 CDCA8Q53HL2 280 aa19.78■□□□□ 0.76
SKIV2L-204ENST00000465703 MYH16Q9H6N6 1097 aa19.77■□□□□ 0.76
SKIV2L-204ENST00000465703 L1TD1Q5T7N2 865 aaKnown RBP19.77■□□□□ 0.76
SKIV2L-204ENST00000465703 SETD5Q9C0A6 1442 aa19.76■□□□□ 0.75
SKIV2L-204ENST00000465703 FHAD1B1AJZ9 1412 aa19.75■□□□□ 0.75
SKIV2L-204ENST00000465703 RTN4Q9NQC3 1192 aaKnown RBP19.75■□□□□ 0.75
SKIV2L-204ENST00000465703 NAP1L5Q96NT1 182 aaPredicted RBP19.74■□□□□ 0.75
SKIV2L-204ENST00000465703 NCLP19338 710 aaKnown RBP19.73■□□□□ 0.75
SKIV2L-204ENST00000465703 BAZ1AQ9NRL2 1556 aaPredicted RBP19.72■□□□□ 0.75
SKIV2L-204ENST00000465703 TCERG1O14776 1098 aaKnown RBP19.72■□□□□ 0.75
SKIV2L-204ENST00000465703 NACADO15069 1562 aa19.7■□□□□ 0.74
SKIV2L-204ENST00000465703 SLC24A1O60721 1099 aa19.69■□□□□ 0.74
SKIV2L-204ENST00000465703 CARD11Q9BXL7 1154 aa19.69■□□□□ 0.74
SKIV2L-204ENST00000465703 SOGA1O94964 1423 aa19.67■□□□□ 0.74
SKIV2L-204ENST00000465703 KNSTRNQ9Y448 316 aa19.67■□□□□ 0.74
SKIV2L-204ENST00000465703 IPO9Q96P70 1041 aaKnown RBP19.66■□□□□ 0.74
SKIV2L-204ENST00000465703 USP35Q9P2H5 1018 aa19.65■□□□□ 0.74
SKIV2L-204ENST00000465703 MS4A1P11836 297 aa19.64■□□□□ 0.74
SKIV2L-204ENST00000465703 FANCIQ9NVI1 1328 aa19.63■□□□□ 0.73
SKIV2L-204ENST00000465703 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.63■□□□□ 0.735e-7■■■□□ 17.1
SKIV2L-204ENST00000465703 CFAP53Q96M91 514 aa19.63■□□□□ 0.73
SKIV2L-204ENST00000465703 RGS3P49796 1198 aa19.62■□□□□ 0.73
SKIV2L-204ENST00000465703 CHGAP10645 457 aaKnown RBP19.61■□□□□ 0.73
SKIV2L-204ENST00000465703 PPP1R15AO75807 674 aaPredicted RBP19.61■□□□□ 0.73
SKIV2L-204ENST00000465703 PTMAP06454 111 aaKnown RBP19.6■□□□□ 0.73
SKIV2L-204ENST00000465703 CHMP4BQ9H444 224 aaKnown RBP19.6■□□□□ 0.73
SKIV2L-204ENST00000465703 HSPA5P11021 654 aaKnown RBP19.58■□□□□ 0.72
SKIV2L-204ENST00000465703 RAB3GAP2Q9H2M9 1393 aa19.57■□□□□ 0.72
SKIV2L-204ENST00000465703 FTSJ3Q8IY81 847 aaKnown RBP19.55■□□□□ 0.72
SKIV2L-204ENST00000465703 BAZ1BQ9UIG0 1483 aaKnown RBP19.55■□□□□ 0.72
SKIV2L-204ENST00000465703 CASC1Q6TDU7 716 aa19.54■□□□□ 0.72
SKIV2L-204ENST00000465703 NUDCQ9Y266 331 aa19.53■□□□□ 0.72
SKIV2L-204ENST00000465703 DNTTIP2Q5QJE6 756 aaKnown RBP19.53■□□□□ 0.72
SKIV2L-204ENST00000465703 PTMSP20962 102 aa19.52■□□□□ 0.72
SKIV2L-204ENST00000465703 CECR2Q9BXF3 1484 aa19.52■□□□□ 0.72
SKIV2L-204ENST00000465703 CFDP1Q9UEE9 299 aaPredicted RBP19.52■□□□□ 0.72
SKIV2L-204ENST00000465703 RCAN3Q9UKA8 241 aa19.51■□□□□ 0.71
SKIV2L-204ENST00000465703 PLEKHD1A6NEE1 506 aa19.5■□□□□ 0.71
SKIV2L-204ENST00000465703 HSCBQ8IWL3 235 aa19.5■□□□□ 0.71
SKIV2L-204ENST00000465703 PNNQ9H307 717 aaKnown RBP19.49■□□□□ 0.71
SKIV2L-204ENST00000465703 ARHGAP35Q9NRY4 1499 aa19.49■□□□□ 0.71
SKIV2L-204ENST00000465703 RALBP1Q15311 655 aa19.48■□□□□ 0.71
SKIV2L-204ENST00000465703 ARID4BQ4LE39 1312 aaPredicted RBP19.48■□□□□ 0.71
SKIV2L-204ENST00000465703 DHX57Q6P158 1386 aaKnown RBP19.48■□□□□ 0.71
SKIV2L-204ENST00000465703 PDE3BQ13370 1112 aa19.48■□□□□ 0.71
SKIV2L-204ENST00000465703 CFAP44Q96MT7 982 aa19.48■□□□□ 0.71
SKIV2L-204ENST00000465703 HSP90AB1P08238 724 aaKnown RBP19.48■□□□□ 0.71
SKIV2L-204ENST00000465703 KANK4Q5T7N3 995 aaPredicted RBP19.47■□□□□ 0.71
SKIV2L-204ENST00000465703 RGL3Q3MIN7 710 aa19.46■□□□□ 0.71
SKIV2L-204ENST00000465703 CCDC88BA6NC98 1476 aa19.46■□□□□ 0.71
SKIV2L-204ENST00000465703 MSNP26038 577 aaKnown RBP19.45■□□□□ 0.7
SKIV2L-204ENST00000465703 STAG3Q9UJ98 1225 aa19.44■□□□□ 0.7
SKIV2L-204ENST00000465703 TMF1P82094 1093 aa19.44■□□□□ 0.7
SKIV2L-204ENST00000465703 SENP3-EIF4A1A0A087X0R7 540 aa19.43■□□□□ 0.7
SKIV2L-204ENST00000465703 CARMIL1Q5VZK9 1371 aa19.43■□□□□ 0.7
SKIV2L-204ENST00000465703 KTN1Q86UP2 1357 aaKnown RBP19.42■□□□□ 0.7
SKIV2L-204ENST00000465703 FRAT1Q92837 279 aaPredicted RBP19.41■□□□□ 0.7
SKIV2L-204ENST00000465703 RSPH6AQ9H0K4 717 aa19.4■□□□□ 0.7
SKIV2L-204ENST00000465703 GBP4Q96PP9 640 aa19.39■□□□□ 0.69
SKIV2L-204ENST00000465703 MAPK8IP3Q9UPT6 1336 aa19.38■□□□□ 0.69
SKIV2L-204ENST00000465703 ROCK2O75116 1388 aaKnown RBP19.38■□□□□ 0.69
SKIV2L-204ENST00000465703 MROH2BQ7Z745 1585 aa19.37■□□□□ 0.69
SKIV2L-204ENST00000465703 FMN1Q68DA7 1419 aa19.37■□□□□ 0.69
SKIV2L-204ENST00000465703 CC2D1BQ5T0F9 858 aaKnown RBP19.36■□□□□ 0.69
SKIV2L-204ENST00000465703 CHAF1AQ13111 956 aaPredicted RBP19.36■□□□□ 0.69
SKIV2L-204ENST00000465703 ZBED9Q6R2W3 1325 aa19.36■□□□□ 0.69
SKIV2L-204ENST00000465703 ABCC8Q09428 1581 aa19.35■□□□□ 0.69
SKIV2L-204ENST00000465703 CHMP7Q8WUX9 453 aaPredicted RBP19.34■□□□□ 0.69
SKIV2L-204ENST00000465703 ESF1Q9H501 851 aaKnown RBP19.34■□□□□ 0.69
SKIV2L-204ENST00000465703 GOLGA6L3A6NEY3 463 aa19.33■□□□□ 0.69
SKIV2L-204ENST00000465703 ZRSR1Q15695 479 aaKnown RBP19.33■□□□□ 0.69
SKIV2L-204ENST00000465703 PHLDB1Q86UU1 1377 aa19.32■□□□□ 0.68
SKIV2L-204ENST00000465703 NEUROD2Q15784 382 aa19.32■□□□□ 0.68
SKIV2L-204ENST00000465703 NLRP13Q86W25 1043 aa19.31■□□□□ 0.68
SKIV2L-204ENST00000465703 DCAF11Q8TEB1 546 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms