RNA–Protein interactions for RNA: ENST00000465596.1

THBS3-205, Transcript of thrombospondin 3, humanhuman

TSL 5

Gene THBS3, Length 489 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-205ENST00000465596 TRIM41Q8WV44 630 aa13.21□□□□□ -0.29
THBS3-205ENST00000465596 KIAA0586Q9BVV6 1533 aa13.2□□□□□ -0.3
THBS3-205ENST00000465596 IQGAP2Q13576 1575 aa13.2□□□□□ -0.3
THBS3-205ENST00000465596 RAPGEF2Q9Y4G8 1499 aa13.19□□□□□ -0.3
THBS3-205ENST00000465596 CHIC1Q5VXU3 224 aa13.17□□□□□ -0.3
THBS3-205ENST00000465596 KIF21BO75037 1637 aa13.15□□□□□ -0.3
THBS3-205ENST00000465596 EEA1Q15075 1411 aa13.14□□□□□ -0.31
THBS3-205ENST00000465596 UGGT2Q9NYU1 1516 aa13.13□□□□□ -0.31
THBS3-205ENST00000465596 PRG4Q92954 1404 aaPredicted RBP13.12□□□□□ -0.31
THBS3-205ENST00000465596 DISP1Q96F81 1524 aa13.11□□□□□ -0.31
THBS3-205ENST00000465596 KIAA0556O60303 1618 aa13.1□□□□□ -0.31
THBS3-205ENST00000465596 ADCY10Q96PN6 1610 aa13.09□□□□□ -0.31
THBS3-205ENST00000465596 JPH4Q96JJ6 628 aa13.07□□□□□ -0.32
THBS3-205ENST00000465596 SAMD9Q5K651 1589 aa13.07□□□□□ -0.32
THBS3-205ENST00000465596 CYB5RLQ6IPT4 315 aa13.04□□□□□ -0.32
THBS3-205ENST00000465596 CSRNP3Q8WYN3 585 aa13.03□□□□□ -0.32
THBS3-205ENST00000465596 KIF13AQ9H1H9 1805 aa13.03□□□□□ -0.32
THBS3-205ENST00000465596 CARMIL2Q6F5E8 1435 aa12.96□□□□□ -0.33
THBS3-205ENST00000465596 ABCA8O94911 1581 aa12.96□□□□□ -0.33
THBS3-205ENST00000465596 MAPKBP1O60336 1514 aa12.96□□□□□ -0.33
THBS3-205ENST00000465596 TNIKQ9UKE5 1360 aa12.95□□□□□ -0.34
THBS3-205ENST00000465596 ABCC2Q92887 1545 aa12.95□□□□□ -0.34
THBS3-205ENST00000465596 UHRF1BP1LA0JNW5 1464 aa12.95□□□□□ -0.34
THBS3-205ENST00000465596 GOLGA3Q08378 1498 aa12.94□□□□□ -0.34
THBS3-205ENST00000465596 ZCCHC11Q5TAX3 1644 aaKnown RBP12.93□□□□□ -0.34
THBS3-205ENST00000465596 PTPRGP23470 1445 aa12.92□□□□□ -0.34
THBS3-205ENST00000465596 FAM9AQ8IZU1 332 aaPredicted RBP12.92□□□□□ -0.34
THBS3-205ENST00000465596 EFCAB5A4FU69 1503 aa12.92□□□□□ -0.34
THBS3-205ENST00000465596 DIP2BQ9P265 1576 aa12.9□□□□□ -0.34
THBS3-205ENST00000465596 KDM5BQ9UGL1 1544 aa12.9□□□□□ -0.34
THBS3-205ENST00000465596 PLB1Q6P1J6 1458 aa12.89□□□□□ -0.35
THBS3-205ENST00000465596 LRRIQ1Q96JM4 1722 aa12.88□□□□□ -0.35
THBS3-205ENST00000465596 RAPGEF6Q8TEU7 1601 aa12.88□□□□□ -0.35
THBS3-205ENST00000465596 UACAQ9BZF9 1416 aa12.88□□□□□ -0.35
THBS3-205ENST00000465596 PPRC1Q5VV67 1664 aaKnown RBP12.86□□□□□ -0.35
THBS3-205ENST00000465596 ARHGAP35Q9NRY4 1499 aa12.85□□□□□ -0.35
THBS3-205ENST00000465596 ABCC10Q5T3U5 1492 aa12.84□□□□□ -0.35
THBS3-205ENST00000465596 FHOD3Q2V2M9 1422 aa12.83□□□□□ -0.36
THBS3-205ENST00000465596 GLI2P10070 1586 aa12.81□□□□□ -0.36
THBS3-205ENST00000465596 MAP3K4Q9Y6R4 1608 aa12.81□□□□□ -0.36
THBS3-205ENST00000465596 NUP153P49790 1475 aaKnown RBP12.8□□□□□ -0.36
THBS3-205ENST00000465596 TSPOAP1O95153 1857 aa12.8□□□□□ -0.36
THBS3-205ENST00000465596 ASXL2Q76L83 1435 aa12.79□□□□□ -0.36
THBS3-205ENST00000465596 ATP10BO94823 1461 aa12.76□□□□□ -0.37
THBS3-205ENST00000465596 CFAP43Q8NDM7 1665 aa12.76□□□□□ -0.37
THBS3-205ENST00000465596 PCF11O94913 1555 aaKnown RBP12.75□□□□□ -0.37
THBS3-205ENST00000465596 EPRSP07814 1512 aaKnown RBP12.75□□□□□ -0.37
THBS3-205ENST00000465596 WDR7Q9Y4E6 1490 aa12.75□□□□□ -0.37
THBS3-205ENST00000465596 HECW1Q76N89 1606 aa12.74□□□□□ -0.37
THBS3-205ENST00000465596 TTBK1Q5TCY1 1321 aaPredicted RBP12.74□□□□□ -0.37
THBS3-205ENST00000465596 P3H3Q8IVL6 736 aa12.73□□□□□ -0.37
THBS3-205ENST00000465596 ABCA9Q8IUA7 1624 aa12.73□□□□□ -0.37
THBS3-205ENST00000465596 UBTFP17480 764 aaKnown RBP12.71□□□□□ -0.37
THBS3-205ENST00000465596 EHMT2Q96KQ7 1210 aa12.71□□□□□ -0.37
THBS3-205ENST00000465596 CDK13Q14004 1512 aaKnown RBP12.71□□□□□ -0.38
THBS3-205ENST00000465596 TRHP20396 242 aaPredicted RBP12.69□□□□□ -0.38
THBS3-205ENST00000465596 FMN1Q68DA7 1419 aa12.69□□□□□ -0.38
THBS3-205ENST00000465596 CLIP1P30622 1438 aa12.68□□□□□ -0.38
THBS3-205ENST00000465596 NPM1P06748 294 aaKnown RBP eCLIP12.67□□□□□ -0.38
THBS3-205ENST00000465596 CEP162Q5TB80 1403 aa12.66□□□□□ -0.38
THBS3-205ENST00000465596 RANGAP1P46060 587 aaPredicted RBP12.66□□□□□ -0.38
THBS3-205ENST00000465596 FYCO1Q9BQS8 1478 aa12.65□□□□□ -0.38
THBS3-205ENST00000465596 TTC37Q6PGP7 1564 aa12.65□□□□□ -0.38
THBS3-205ENST00000465596 KIF14Q15058 1648 aa12.65□□□□□ -0.38
THBS3-205ENST00000465596 CASKIN1Q8WXD9 1431 aa12.64□□□□□ -0.39
THBS3-205ENST00000465596 MAGI3Q5TCQ9 1506 aa12.64□□□□□ -0.39
THBS3-205ENST00000465596 FAM69CQ0P6D2 419 aa12.64□□□□□ -0.39
THBS3-205ENST00000465596 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.62□□□□□ -0.39
THBS3-205ENST00000465596 KDM6BO15054 1643 aa12.62□□□□□ -0.39
THBS3-205ENST00000465596 MYO5CQ9NQX4 1742 aa12.61□□□□□ -0.39
THBS3-205ENST00000465596 CDC42BPAQ5VT25 1732 aa12.59□□□□□ -0.39
THBS3-205ENST00000465596 CCDC18Q5T9S5 1454 aa12.59□□□□□ -0.39
THBS3-205ENST00000465596 CDC42BPBQ9Y5S2 1711 aa12.59□□□□□ -0.39
THBS3-205ENST00000465596 COL17A1Q9UMD9 1497 aaPredicted RBP12.59□□□□□ -0.39
THBS3-205ENST00000465596 LOC105371045A0A1W2PR82 267 aa12.58□□□□□ -0.4
THBS3-205ENST00000465596 ARID3CA6NKF2 412 aa12.58□□□□□ -0.4
THBS3-205ENST00000465596 FRMPD1Q5SYB0 1578 aa12.57□□□□□ -0.4
THBS3-205ENST00000465596 TEX14Q8IWB6 1497 aa12.57□□□□□ -0.4
THBS3-205ENST00000465596 RICTORQ6R327 1708 aa12.57□□□□□ -0.4
THBS3-205ENST00000465596 PREX2Q70Z35 1606 aa12.56□□□□□ -0.4
THBS3-205ENST00000465596 CD109Q6YHK3 1445 aa12.55□□□□□ -0.4
THBS3-205ENST00000465596 CFAP74Q9C0B2 1584 aa12.55□□□□□ -0.4
THBS3-205ENST00000465596 TROQ12816 1431 aaPredicted RBP12.54□□□□□ -0.4
THBS3-205ENST00000465596 ARAP3Q8WWN8 1544 aa12.54□□□□□ -0.4
THBS3-205ENST00000465596 TIAM1Q13009 1591 aa12.52□□□□□ -0.41
THBS3-205ENST00000465596 VPS8Q8N3P4 1428 aa12.51□□□□□ -0.41
THBS3-205ENST00000465596 NEO1Q92859 1461 aa12.51□□□□□ -0.41
THBS3-205ENST00000465596 KCNH8Q96L42 1107 aa12.49□□□□□ -0.41
THBS3-205ENST00000465596 EHBP1L1Q8N3D4 1523 aa12.48□□□□□ -0.41
THBS3-205ENST00000465596 ITSN2Q9NZM3 1697 aa12.48□□□□□ -0.41
THBS3-205ENST00000465596 MAP3K1Q13233 1512 aa12.47□□□□□ -0.41
THBS3-205ENST00000465596 ZMYM4Q5VZL5 1548 aa12.47□□□□□ -0.41
THBS3-205ENST00000465596 FANCAO15360 1455 aa12.46□□□□□ -0.41
THBS3-205ENST00000465596 PLCH2O75038 1416 aa12.46□□□□□ -0.41
THBS3-205ENST00000465596 SIGLEC1Q9BZZ2 1709 aa12.46□□□□□ -0.41
THBS3-205ENST00000465596 PLEKHD1A6NEE1 506 aa12.46□□□□□ -0.41
THBS3-205ENST00000465596 SUPT6HQ7KZ85 1726 aaKnown RBP12.45□□□□□ -0.42
THBS3-205ENST00000465596 SAMD9LQ8IVG5 1584 aa12.44□□□□□ -0.42
THBS3-205ENST00000465596 ABCC1P33527 1531 aa12.44□□□□□ -0.42
THBS3-205ENST00000465596 KDM5CP41229 1560 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms