RNA–Protein interactions for RNA: ENST00000465405.1

GABRE-205, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 1 (best)

Gene GABRE, Length 706 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-205ENST00000465405 NUP160Q12769 1436 aa15.3■□□□□ 0.04
GABRE-205ENST00000465405 ERCC6L2Q5T890 1561 aa15.25■□□□□ 0.03
GABRE-205ENST00000465405 KIF27Q86VH2 1401 aa15.24■□□□□ 0.03
GABRE-205ENST00000465405 IGF1RP08069 1367 aa15.23■□□□□ 0.03
GABRE-205ENST00000465405 SHROOM2Q13796 1616 aa15.21■□□□□ 0.03
GABRE-205ENST00000465405 CUL7Q14999 1698 aa15.17■□□□□ 0.02
GABRE-205ENST00000465405 RUSC2Q8N2Y8 1516 aa15.17■□□□□ 0.02
GABRE-205ENST00000465405 TRHP20396 242 aaPredicted RBP15.15■□□□□ 0.02
GABRE-205ENST00000465405 JPH4Q96JJ6 628 aa15.15■□□□□ 0.02
GABRE-205ENST00000465405 PRG4Q92954 1404 aaPredicted RBP15.14■□□□□ 0.01
GABRE-205ENST00000465405 CARMIL1Q5VZK9 1371 aa15.12■□□□□ 0.01
GABRE-205ENST00000465405 KIAA0586Q9BVV6 1533 aa15.09■□□□□ 0.01
GABRE-205ENST00000465405 PPP6R1Q9UPN7 881 aa15.09■□□□□ 0.01
GABRE-205ENST00000465405 ADRA2BP18089 450 aa15.01□□□□□ -0.01
GABRE-205ENST00000465405 RAPGEF2Q9Y4G8 1499 aa15.01□□□□□ -0.01
GABRE-205ENST00000465405 IQGAP2Q13576 1575 aa14.98□□□□□ -0.01
GABRE-205ENST00000465405 ADCY10Q96PN6 1610 aa14.95□□□□□ -0.02
GABRE-205ENST00000465405 TTBK1Q5TCY1 1321 aaPredicted RBP14.94□□□□□ -0.02
GABRE-205ENST00000465405 CARMIL2Q6F5E8 1435 aa14.92□□□□□ -0.02
GABRE-205ENST00000465405 DISP1Q96F81 1524 aa14.92□□□□□ -0.02
GABRE-205ENST00000465405 PTPRGP23470 1445 aa14.92□□□□□ -0.02
GABRE-205ENST00000465405 PRXQ9BXM0 1461 aa14.9□□□□□ -0.02
GABRE-205ENST00000465405 KIF13AQ9H1H9 1805 aa14.9□□□□□ -0.02
GABRE-205ENST00000465405 TNIKQ9UKE5 1360 aa14.9□□□□□ -0.02
GABRE-205ENST00000465405 UGGT2Q9NYU1 1516 aa14.89□□□□□ -0.03
GABRE-205ENST00000465405 NPM1P06748 294 aaKnown RBP eCLIP14.89□□□□□ -0.03
GABRE-205ENST00000465405 CTTNBP2Q8WZ74 1663 aa14.89□□□□□ -0.03
GABRE-205ENST00000465405 MAPKBP1O60336 1514 aa14.87□□□□□ -0.03
GABRE-205ENST00000465405 KIAA0556O60303 1618 aa14.85□□□□□ -0.03
GABRE-205ENST00000465405 CSRNP3Q8WYN3 585 aa14.84□□□□□ -0.03
GABRE-205ENST00000465405 ABCC10Q5T3U5 1492 aa14.83□□□□□ -0.03
GABRE-205ENST00000465405 FAM69CQ0P6D2 419 aa14.83□□□□□ -0.04
GABRE-205ENST00000465405 DIP2BQ9P265 1576 aa14.82□□□□□ -0.04
GABRE-205ENST00000465405 ABCC2Q92887 1545 aa14.82□□□□□ -0.04
GABRE-205ENST00000465405 UACAQ9BZF9 1416 aa14.81□□□□□ -0.04
GABRE-205ENST00000465405 UHRF1BP1LA0JNW5 1464 aa14.8□□□□□ -0.04
GABRE-205ENST00000465405 FAM9AQ8IZU1 332 aaPredicted RBP14.79□□□□□ -0.04
GABRE-205ENST00000465405 EEA1Q15075 1411 aa14.77□□□□□ -0.04
GABRE-205ENST00000465405 GOLGA3Q08378 1498 aa14.76□□□□□ -0.05
GABRE-205ENST00000465405 ASXL2Q76L83 1435 aa14.75□□□□□ -0.05
GABRE-205ENST00000465405 PLB1Q6P1J6 1458 aa14.75□□□□□ -0.05
GABRE-205ENST00000465405 PLPPR3Q6T4P5 718 aa14.74□□□□□ -0.05
GABRE-205ENST00000465405 KDM5BQ9UGL1 1544 aa14.74□□□□□ -0.05
GABRE-205ENST00000465405 ZCCHC11Q5TAX3 1644 aaKnown RBP14.74□□□□□ -0.05
GABRE-205ENST00000465405 P3H3Q8IVL6 736 aa14.73□□□□□ -0.05
GABRE-205ENST00000465405 TSPOAP1O95153 1857 aa14.73□□□□□ -0.05
GABRE-205ENST00000465405 ABCA8O94911 1581 aa14.71□□□□□ -0.05
GABRE-205ENST00000465405 SAMD9Q5K651 1589 aa14.68□□□□□ -0.06
GABRE-205ENST00000465405 KIF21BO75037 1637 aa14.68□□□□□ -0.06
GABRE-205ENST00000465405 GLI2P10070 1586 aa14.68□□□□□ -0.06
GABRE-205ENST00000465405 RANGAP1P46060 587 aaPredicted RBP14.67□□□□□ -0.06
GABRE-205ENST00000465405 EPRSP07814 1512 aaKnown RBP14.66□□□□□ -0.06
GABRE-205ENST00000465405 PPRC1Q5VV67 1664 aaKnown RBP14.65□□□□□ -0.06
GABRE-205ENST00000465405 EHMT2Q96KQ7 1210 aa14.65□□□□□ -0.06
GABRE-205ENST00000465405 KDM6BO15054 1643 aa14.64□□□□□ -0.07
GABRE-205ENST00000465405 WDR7Q9Y4E6 1490 aa14.63□□□□□ -0.07
GABRE-205ENST00000465405 MAP3K4Q9Y6R4 1608 aa14.63□□□□□ -0.07
GABRE-205ENST00000465405 ARID3CA6NKF2 412 aa14.62□□□□□ -0.07
GABRE-205ENST00000465405 CACNB1Q02641 598 aaPredicted RBP14.62□□□□□ -0.07
GABRE-205ENST00000465405 FHOD3Q2V2M9 1422 aa14.6□□□□□ -0.07
GABRE-205ENST00000465405 ATP10BO94823 1461 aa14.59□□□□□ -0.07
GABRE-205ENST00000465405 KCNH8Q96L42 1107 aa14.59□□□□□ -0.07
GABRE-205ENST00000465405 RAPGEF6Q8TEU7 1601 aa14.59□□□□□ -0.07
GABRE-205ENST00000465405 UBTFP17480 764 aaKnown RBP14.57□□□□□ -0.08
GABRE-205ENST00000465405 COL17A1Q9UMD9 1497 aaPredicted RBP14.55□□□□□ -0.08
GABRE-205ENST00000465405 EFCAB5A4FU69 1503 aa14.55□□□□□ -0.08
GABRE-205ENST00000465405 NUP153P49790 1475 aaKnown RBP14.54□□□□□ -0.08
GABRE-205ENST00000465405 CFAP43Q8NDM7 1665 aa14.53□□□□□ -0.08
GABRE-205ENST00000465405 TEX14Q8IWB6 1497 aa14.53□□□□□ -0.08
GABRE-205ENST00000465405 CD109Q6YHK3 1445 aa14.52□□□□□ -0.08
GABRE-205ENST00000465405 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.51□□□□□ -0.09
GABRE-205ENST00000465405 HNRNPUL2Q1KMD3 747 aaKnown RBP14.51□□□□□ -0.09
GABRE-205ENST00000465405 MAGI3Q5TCQ9 1506 aa14.5□□□□□ -0.09
GABRE-205ENST00000465405 ARHGAP35Q9NRY4 1499 aa14.48□□□□□ -0.09
GABRE-205ENST00000465405 ABCA9Q8IUA7 1624 aa14.47□□□□□ -0.09
GABRE-205ENST00000465405 CDK13Q14004 1512 aaKnown RBP14.43□□□□□ -0.1
GABRE-205ENST00000465405 KDM4FA0A1W2PPD8 638 aa14.42□□□□□ -0.1
GABRE-205ENST00000465405 PLEKHD1A6NEE1 506 aa14.42□□□□□ -0.1
GABRE-205ENST00000465405 FMN1Q68DA7 1419 aa14.41□□□□□ -0.1
GABRE-205ENST00000465405 ATP1B4Q9UN42 357 aaPredicted RBP14.4□□□□□ -0.1
GABRE-205ENST00000465405 HECW1Q76N89 1606 aa14.38□□□□□ -0.11
GABRE-205ENST00000465405 ARAP3Q8WWN8 1544 aa14.38□□□□□ -0.11
GABRE-205ENST00000465405 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.37□□□□□ -0.11
GABRE-205ENST00000465405 LRRIQ1Q96JM4 1722 aa14.36□□□□□ -0.11
GABRE-205ENST00000465405 TTC37Q6PGP7 1564 aa14.36□□□□□ -0.11
GABRE-205ENST00000465405 NEO1Q92859 1461 aa14.35□□□□□ -0.11
GABRE-205ENST00000465405 ADGRL1O94910 1474 aa14.34□□□□□ -0.11
GABRE-205ENST00000465405 PHLDB1Q86UU1 1377 aa14.34□□□□□ -0.11
GABRE-205ENST00000465405 RAPGEF3O95398 923 aa14.33□□□□□ -0.12
GABRE-205ENST00000465405 PCF11O94913 1555 aaKnown RBP14.32□□□□□ -0.12
GABRE-205ENST00000465405 CLIP1P30622 1438 aa14.31□□□□□ -0.12
GABRE-205ENST00000465405 FANCAO15360 1455 aa14.31□□□□□ -0.12
GABRE-205ENST00000465405 FRMPD1Q5SYB0 1578 aa14.3□□□□□ -0.12
GABRE-205ENST00000465405 KIF14Q15058 1648 aa14.3□□□□□ -0.12
GABRE-205ENST00000465405 AKNAQ7Z591 1439 aa14.29□□□□□ -0.12
GABRE-205ENST00000465405 CASKIN1Q8WXD9 1431 aa14.29□□□□□ -0.12
GABRE-205ENST00000465405 CDK11AQ9UQ88 783 aaPredicted RBP14.28□□□□□ -0.12
GABRE-205ENST00000465405 CFAP74Q9C0B2 1584 aa14.27□□□□□ -0.12
GABRE-205ENST00000465405 TROQ12816 1431 aaPredicted RBP14.27□□□□□ -0.12
GABRE-205ENST00000465405 RICTORQ6R327 1708 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms