RNA–Protein interactions for RNA: ENST00000464852.1

TNRC18-209, Transcript of trinucleotide repeat containing 18, humanhuman

TSL 3

Gene TNRC18, Length 418 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18-209ENST00000464852 ADGRL1O94910 1474 aa17.84■□□□□ 0.45
TNRC18-209ENST00000464852 DIP2BQ9P265 1576 aa17.83■□□□□ 0.44
TNRC18-209ENST00000464852 SENP3Q9H4L4 574 aaPredicted RBP17.81■□□□□ 0.44
TNRC18-209ENST00000464852 SHROOM2Q13796 1616 aa17.8■□□□□ 0.44
TNRC18-209ENST00000464852 EEA1Q15075 1411 aa17.8■□□□□ 0.44
TNRC18-209ENST00000464852 FAM9AQ8IZU1 332 aaPredicted RBP17.78■□□□□ 0.44
TNRC18-209ENST00000464852 ABCA10Q8WWZ4 1543 aa17.77■□□□□ 0.44
TNRC18-209ENST00000464852 LMTK3Q96Q04 1460 aa17.77■□□□□ 0.44
TNRC18-209ENST00000464852 KIF27Q86VH2 1401 aa17.77■□□□□ 0.44
TNRC18-209ENST00000464852 CSRNP3Q8WYN3 585 aa17.75■□□□□ 0.43
TNRC18-209ENST00000464852 MAPKBP1O60336 1514 aa17.74■□□□□ 0.43
TNRC18-209ENST00000464852 RUSC2Q8N2Y8 1516 aa17.74■□□□□ 0.43
TNRC18-209ENST00000464852 GRIN2AQ12879 1464 aa17.74■□□□□ 0.43
TNRC18-209ENST00000464852 NUP160Q12769 1436 aa17.72■□□□□ 0.43
TNRC18-209ENST00000464852 ILDR2Q71H61 639 aa17.69■□□□□ 0.42
TNRC18-209ENST00000464852 SOCS7O14512 581 aa17.68■□□□□ 0.42
TNRC18-209ENST00000464852 NPM1P06748 294 aaKnown RBP eCLIP17.68■□□□□ 0.42
TNRC18-209ENST00000464852 ABCA5Q8WWZ7 1642 aa17.67■□□□□ 0.42
TNRC18-209ENST00000464852 PRG4Q92954 1404 aaPredicted RBP17.65■□□□□ 0.42
TNRC18-209ENST00000464852 IGF1RP08069 1367 aa17.65■□□□□ 0.42
TNRC18-209ENST00000464852 ADCY10Q96PN6 1610 aa17.63■□□□□ 0.41
TNRC18-209ENST00000464852 PPRC1Q5VV67 1664 aaKnown RBP17.59■□□□□ 0.41
TNRC18-209ENST00000464852 ADAMTS12P58397 1594 aa17.59■□□□□ 0.41
TNRC18-209ENST00000464852 JPH4Q96JJ6 628 aa17.59■□□□□ 0.41
TNRC18-209ENST00000464852 LOC105371045A0A1W2PR82 267 aa17.58■□□□□ 0.4
TNRC18-209ENST00000464852 ERICH3Q5RHP9 1530 aa17.57■□□□□ 0.4
TNRC18-209ENST00000464852 COL17A1Q9UMD9 1497 aaPredicted RBP17.56■□□□□ 0.4
TNRC18-209ENST00000464852 CARMIL1Q5VZK9 1371 aa17.55■□□□□ 0.4
TNRC18-209ENST00000464852 PRXQ9BXM0 1461 aa17.54■□□□□ 0.4
TNRC18-209ENST00000464852 KIF21BO75037 1637 aa17.51■□□□□ 0.39
TNRC18-209ENST00000464852 CUL7Q14999 1698 aa17.5■□□□□ 0.39
TNRC18-209ENST00000464852 EHMT2Q96KQ7 1210 aa17.49■□□□□ 0.39
TNRC18-209ENST00000464852 FHAD1B1AJZ9 1412 aa17.48■□□□□ 0.39
TNRC18-209ENST00000464852 UBTFP17480 764 aaKnown RBP17.48■□□□□ 0.39
TNRC18-209ENST00000464852 GOLGA3Q08378 1498 aa17.48■□□□□ 0.39
TNRC18-209ENST00000464852 RAPGEF2Q9Y4G8 1499 aa17.48■□□□□ 0.39
TNRC18-209ENST00000464852 DISP3Q9P2K9 1392 aa17.47■□□□□ 0.39
TNRC18-209ENST00000464852 TNIKQ9UKE5 1360 aa17.4■□□□□ 0.38
TNRC18-209ENST00000464852 GLI2P10070 1586 aa17.4■□□□□ 0.38
TNRC18-209ENST00000464852 ASXL2Q76L83 1435 aa17.33■□□□□ 0.36
TNRC18-209ENST00000464852 MAP3K4Q9Y6R4 1608 aa17.3■□□□□ 0.36
TNRC18-209ENST00000464852 PLB1Q6P1J6 1458 aa17.29■□□□□ 0.36
TNRC18-209ENST00000464852 CERKQ8TCT0 537 aa17.27■□□□□ 0.36
TNRC18-209ENST00000464852 ABCC2Q92887 1545 aa17.26■□□□□ 0.35
TNRC18-209ENST00000464852 CEP162Q5TB80 1403 aa17.23■□□□□ 0.35
TNRC18-209ENST00000464852 TEX14Q8IWB6 1497 aa17.23■□□□□ 0.35
TNRC18-209ENST00000464852 CTTNBP2Q8WZ74 1663 aa17.23■□□□□ 0.35
TNRC18-209ENST00000464852 TTBK1Q5TCY1 1321 aaPredicted RBP17.22■□□□□ 0.35
TNRC18-209ENST00000464852 PTPRGP23470 1445 aa17.22■□□□□ 0.35
TNRC18-209ENST00000464852 EPRSP07814 1512 aaKnown RBP17.22■□□□□ 0.35
TNRC18-209ENST00000464852 PTPRMP28827 1452 aa17.22■□□□□ 0.35
TNRC18-209ENST00000464852 KIAA0586Q9BVV6 1533 aa17.21■□□□□ 0.35
TNRC18-209ENST00000464852 SPATA31D1Q6ZQQ2 1576 aa17.2■□□□□ 0.34
TNRC18-209ENST00000464852 RANGAP1P46060 587 aaPredicted RBP17.2■□□□□ 0.34
TNRC18-209ENST00000464852 CLIP1P30622 1438 aa17.2■□□□□ 0.34
TNRC18-209ENST00000464852 PCF11O94913 1555 aaKnown RBP17.19■□□□□ 0.34
TNRC18-209ENST00000464852 ADAMTSL3P82987 1691 aa17.18■□□□□ 0.34
TNRC18-209ENST00000464852 IQGAP2Q13576 1575 aa17.16■□□□□ 0.34
TNRC18-209ENST00000464852 HSPA2P54652 639 aa17.12■□□□□ 0.33
TNRC18-209ENST00000464852 UHRF1BP1LA0JNW5 1464 aa17.11■□□□□ 0.33
TNRC18-209ENST00000464852 EFCAB5A4FU69 1503 aa17.1■□□□□ 0.33
TNRC18-209ENST00000464852 ARHGAP35Q9NRY4 1499 aa17.09■□□□□ 0.33
TNRC18-209ENST00000464852 UGGT2Q9NYU1 1516 aa17.09■□□□□ 0.33
TNRC18-209ENST00000464852 P3H3Q8IVL6 736 aa17.07■□□□□ 0.32
TNRC18-209ENST00000464852 KDM5BQ9UGL1 1544 aa17.06■□□□□ 0.32
TNRC18-209ENST00000464852 UACAQ9BZF9 1416 aa17.05■□□□□ 0.32
TNRC18-209ENST00000464852 ZCCHC11Q5TAX3 1644 aaKnown RBP17.05■□□□□ 0.32
TNRC18-209ENST00000464852 CARMIL2Q6F5E8 1435 aa17.04■□□□□ 0.32
TNRC18-209ENST00000464852 SAMD9Q5K651 1589 aa17.04■□□□□ 0.32
TNRC18-209ENST00000464852 MADDQ8WXG6 1647 aa17.03■□□□□ 0.32
TNRC18-209ENST00000464852 BCORL1Q5H9F3 1711 aa17.01■□□□□ 0.31
TNRC18-209ENST00000464852 MAGI3Q5TCQ9 1506 aa17.01■□□□□ 0.31
TNRC18-209ENST00000464852 DISP1Q96F81 1524 aa17.01■□□□□ 0.31
TNRC18-209ENST00000464852 CD109Q6YHK3 1445 aa16.99■□□□□ 0.31
TNRC18-209ENST00000464852 VPS8Q8N3P4 1428 aa16.99■□□□□ 0.31
TNRC18-209ENST00000464852 CFAP43Q8NDM7 1665 aa16.98■□□□□ 0.31
TNRC18-209ENST00000464852 FHOD3Q2V2M9 1422 aa16.98■□□□□ 0.31
TNRC18-209ENST00000464852 FMN1Q68DA7 1419 aa16.97■□□□□ 0.31
TNRC18-209ENST00000464852 KIAA0556O60303 1618 aa16.96■□□□□ 0.31
TNRC18-209ENST00000464852 RIMS1Q86UR5 1692 aaKnown RBP16.96■□□□□ 0.31
TNRC18-209ENST00000464852 WDR7Q9Y4E6 1490 aa16.95■□□□□ 0.3
TNRC18-209ENST00000464852 ARAP3Q8WWN8 1544 aa16.93■□□□□ 0.3
TNRC18-209ENST00000464852 APLP2Q06481 763 aa16.92■□□□□ 0.3
TNRC18-209ENST00000464852 KCNH8Q96L42 1107 aa16.92■□□□□ 0.3
TNRC18-209ENST00000464852 PLPPR3Q6T4P5 718 aa16.89■□□□□ 0.29
TNRC18-209ENST00000464852 CASKIN1Q8WXD9 1431 aa16.88■□□□□ 0.29
TNRC18-209ENST00000464852 ARID4BQ4LE39 1312 aaPredicted RBP16.88■□□□□ 0.29
TNRC18-209ENST00000464852 ATP1B4Q9UN42 357 aaPredicted RBP16.87■□□□□ 0.29
TNRC18-209ENST00000464852 STRCQ7RTU9 1775 aa16.85■□□□□ 0.29
TNRC18-209ENST00000464852 RAPGEF3O95398 923 aa16.85■□□□□ 0.29
TNRC18-209ENST00000464852 FYCO1Q9BQS8 1478 aa16.85■□□□□ 0.29
TNRC18-209ENST00000464852 MAP3K1Q13233 1512 aa16.8■□□□□ 0.28
TNRC18-209ENST00000464852 RAPGEF6Q8TEU7 1601 aa16.78■□□□□ 0.28
TNRC18-209ENST00000464852 HECW1Q76N89 1606 aa16.77■□□□□ 0.27
TNRC18-209ENST00000464852 ABCA8O94911 1581 aa16.77■□□□□ 0.27
TNRC18-209ENST00000464852 YEATS2Q9ULM3 1422 aa16.76■□□□□ 0.27
TNRC18-209ENST00000464852 FRMPD1Q5SYB0 1578 aa16.76■□□□□ 0.27
TNRC18-209ENST00000464852 CCDC18Q5T9S5 1454 aa16.74■□□□□ 0.27
TNRC18-209ENST00000464852 DMRT2Q9Y5R5 561 aa16.74■□□□□ 0.27
TNRC18-209ENST00000464852 NUP153P49790 1475 aaKnown RBP16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms