RNA–Protein interactions for RNA: ENST00000464800.5

MCF2L-220, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 720 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-220ENST00000464800 JPH4Q96JJ6 628 aa26.05■■□□□ 1.76
MCF2L-220ENST00000464800 MAPKBP1O60336 1514 aa25.97■■□□□ 1.75
MCF2L-220ENST00000464800 ADCY10Q96PN6 1610 aa25.96■■□□□ 1.75
MCF2L-220ENST00000464800 ABCC10Q5T3U5 1492 aa25.95■■□□□ 1.74
MCF2L-220ENST00000464800 CUL7Q14999 1698 aa25.93■■□□□ 1.74
MCF2L-220ENST00000464800 DIP2BQ9P265 1576 aa25.92■■□□□ 1.74
MCF2L-220ENST00000464800 NPM1P06748 294 aaKnown RBP eCLIP25.9■■□□□ 1.74
MCF2L-220ENST00000464800 KIAA0586Q9BVV6 1533 aa25.89■■□□□ 1.74
MCF2L-220ENST00000464800 FAM69CQ0P6D2 419 aa25.88■■□□□ 1.73
MCF2L-220ENST00000464800 KIF27Q86VH2 1401 aa25.86■■□□□ 1.73
MCF2L-220ENST00000464800 IGF1RP08069 1367 aa25.82■■□□□ 1.72
MCF2L-220ENST00000464800 KDM6BO15054 1643 aa25.78■■□□□ 1.72
MCF2L-220ENST00000464800 TSPOAP1O95153 1857 aa25.77■■□□□ 1.72
MCF2L-220ENST00000464800 PTPRGP23470 1445 aa25.69■■□□□ 1.7
MCF2L-220ENST00000464800 CARMIL1Q5VZK9 1371 aa25.67■■□□□ 1.7
MCF2L-220ENST00000464800 IQGAP2Q13576 1575 aa25.66■■□□□ 1.7
MCF2L-220ENST00000464800 CARMIL2Q6F5E8 1435 aa25.66■■□□□ 1.7
MCF2L-220ENST00000464800 ABCC2Q92887 1545 aa25.63■■□□□ 1.69
MCF2L-220ENST00000464800 TNIKQ9UKE5 1360 aa25.63■■□□□ 1.69
MCF2L-220ENST00000464800 TTBK1Q5TCY1 1321 aaPredicted RBP25.61■■□□□ 1.69
MCF2L-220ENST00000464800 PLB1Q6P1J6 1458 aa25.56■■□□□ 1.68
MCF2L-220ENST00000464800 GLI2P10070 1586 aa25.56■■□□□ 1.68
MCF2L-220ENST00000464800 ASXL2Q76L83 1435 aa25.55■■□□□ 1.68
MCF2L-220ENST00000464800 PPRC1Q5VV67 1664 aaKnown RBP25.55■■□□□ 1.68
MCF2L-220ENST00000464800 UHRF1BP1LA0JNW5 1464 aa25.55■■□□□ 1.68
MCF2L-220ENST00000464800 KDM4FA0A1W2PPD8 638 aa25.53■■□□□ 1.68
MCF2L-220ENST00000464800 DISP1Q96F81 1524 aa25.51■■□□□ 1.67
MCF2L-220ENST00000464800 UACAQ9BZF9 1416 aa25.5■■□□□ 1.67
MCF2L-220ENST00000464800 UGGT2Q9NYU1 1516 aa25.46■■□□□ 1.67
MCF2L-220ENST00000464800 RAPGEF2Q9Y4G8 1499 aa25.44■■□□□ 1.66
MCF2L-220ENST00000464800 KIAA0556O60303 1618 aa25.44■■□□□ 1.66
MCF2L-220ENST00000464800 ZCCHC11Q5TAX3 1644 aaKnown RBP25.44■■□□□ 1.66
MCF2L-220ENST00000464800 MAP3K4Q9Y6R4 1608 aa25.44■■□□□ 1.66
MCF2L-220ENST00000464800 KDM5BQ9UGL1 1544 aa25.43■■□□□ 1.66
MCF2L-220ENST00000464800 EPRSP07814 1512 aaKnown RBP25.41■■□□□ 1.66
MCF2L-220ENST00000464800 TEX14Q8IWB6 1497 aa25.37■■□□□ 1.65
MCF2L-220ENST00000464800 CTTNBP2Q8WZ74 1663 aa25.36■■□□□ 1.65
MCF2L-220ENST00000464800 ADGRL1O94910 1474 aa25.34■■□□□ 1.65
MCF2L-220ENST00000464800 COL17A1Q9UMD9 1497 aaPredicted RBP25.31■■□□□ 1.64
MCF2L-220ENST00000464800 WDR7Q9Y4E6 1490 aa25.28■■□□□ 1.64
MCF2L-220ENST00000464800 GOLGA3Q08378 1498 aa25.23■■□□□ 1.63
MCF2L-220ENST00000464800 CFAP43Q8NDM7 1665 aa25.22■■□□□ 1.63
MCF2L-220ENST00000464800 ABCA8O94911 1581 aa25.19■■□□□ 1.62
MCF2L-220ENST00000464800 MAGI3Q5TCQ9 1506 aa25.14■■□□□ 1.62
MCF2L-220ENST00000464800 CD109Q6YHK3 1445 aa25.12■■□□□ 1.61
MCF2L-220ENST00000464800 HECW2Q9P2P5 1572 aa25.12■■□□□ 1.61
MCF2L-220ENST00000464800 PRXQ9BXM0 1461 aa25.09■■□□□ 1.61
MCF2L-220ENST00000464800 ILDR1Q86SU0 546 aaPredicted RBP25.06■■□□□ 1.6
MCF2L-220ENST00000464800 KCNH8Q96L42 1107 aa25.06■■□□□ 1.6
MCF2L-220ENST00000464800 KIF21BO75037 1637 aa25.02■■□□□ 1.6
MCF2L-220ENST00000464800 ARAP3Q8WWN8 1544 aa24.96■■□□□ 1.59
MCF2L-220ENST00000464800 FAM9AQ8IZU1 332 aaPredicted RBP24.96■■□□□ 1.59
MCF2L-220ENST00000464800 ABCA9Q8IUA7 1624 aa24.95■■□□□ 1.58
MCF2L-220ENST00000464800 ATP10BO94823 1461 aa24.93■■□□□ 1.58
MCF2L-220ENST00000464800 SAMD9Q5K651 1589 aa24.93■■□□□ 1.58
MCF2L-220ENST00000464800 ARID3CA6NKF2 412 aa24.91■■□□□ 1.58
MCF2L-220ENST00000464800 RAPGEF6Q8TEU7 1601 aa24.9■■□□□ 1.58
MCF2L-220ENST00000464800 P3H3Q8IVL6 736 aa24.89■■□□□ 1.58
MCF2L-220ENST00000464800 PHLDB1Q86UU1 1377 aa24.86■■□□□ 1.57
MCF2L-220ENST00000464800 NEO1Q92859 1461 aa24.82■■□□□ 1.56
MCF2L-220ENST00000464800 ADAMTSL3P82987 1691 aa24.81■■□□□ 1.56
MCF2L-220ENST00000464800 FRMPD1Q5SYB0 1578 aa24.78■■□□□ 1.56
MCF2L-220ENST00000464800 CSRNP3Q8WYN3 585 aa24.76■■□□□ 1.55
MCF2L-220ENST00000464800 NUP153P49790 1475 aaKnown RBP24.76■■□□□ 1.55
MCF2L-220ENST00000464800 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.75■■□□□ 1.55
MCF2L-220ENST00000464800 HNRNPUL2Q1KMD3 747 aaKnown RBP24.75■■□□□ 1.55
MCF2L-220ENST00000464800 PTPRMP28827 1452 aa24.75■■□□□ 1.55
MCF2L-220ENST00000464800 BCORL1Q5H9F3 1711 aa24.74■■□□□ 1.55
MCF2L-220ENST00000464800 RAPGEF3O95398 923 aa24.73■■□□□ 1.55
MCF2L-220ENST00000464800 MADDQ8WXG6 1647 aa24.7■■□□□ 1.54
MCF2L-220ENST00000464800 ARHGEF40Q8TER5 1519 aa24.69■■□□□ 1.54
MCF2L-220ENST00000464800 EEA1Q15075 1411 aa24.69■■□□□ 1.54
MCF2L-220ENST00000464800 FHOD3Q2V2M9 1422 aa24.69■■□□□ 1.54
MCF2L-220ENST00000464800 CFAP74Q9C0B2 1584 aa24.68■■□□□ 1.54
MCF2L-220ENST00000464800 RICTORQ6R327 1708 aa24.67■■□□□ 1.54
MCF2L-220ENST00000464800 RANGAP1P46060 587 aaPredicted RBP24.64■■□□□ 1.54
MCF2L-220ENST00000464800 ARID4BQ4LE39 1312 aaPredicted RBP24.63■■□□□ 1.53
MCF2L-220ENST00000464800 PCF11O94913 1555 aaKnown RBP24.63■■□□□ 1.53
MCF2L-220ENST00000464800 EFCAB5A4FU69 1503 aa24.62■■□□□ 1.53
MCF2L-220ENST00000464800 DENND4BO75064 1496 aaPredicted RBP24.62■■□□□ 1.53
MCF2L-220ENST00000464800 RIMS1Q86UR5 1692 aaKnown RBP24.62■■□□□ 1.53
MCF2L-220ENST00000464800 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.61■■□□□ 1.53
MCF2L-220ENST00000464800 TTC37Q6PGP7 1564 aa24.6■■□□□ 1.53
MCF2L-220ENST00000464800 FANCAO15360 1455 aa24.6■■□□□ 1.53
MCF2L-220ENST00000464800 PLEKHD1A6NEE1 506 aa24.59■■□□□ 1.53
MCF2L-220ENST00000464800 AKNAQ7Z591 1439 aa24.58■■□□□ 1.53
MCF2L-220ENST00000464800 ZMYM4Q5VZL5 1548 aa24.57■■□□□ 1.52
MCF2L-220ENST00000464800 LMTK3Q96Q04 1460 aa24.56■■□□□ 1.52
MCF2L-220ENST00000464800 FBXO41Q8TF61 875 aa24.55■■□□□ 1.52
MCF2L-220ENST00000464800 ZFYVE16Q7Z3T8 1539 aa24.53■■□□□ 1.52
MCF2L-220ENST00000464800 POGZQ7Z3K3 1410 aa24.51■■□□□ 1.51
MCF2L-220ENST00000464800 CDK13Q14004 1512 aaKnown RBP24.51■■□□□ 1.51
MCF2L-220ENST00000464800 SIGLEC1Q9BZZ2 1709 aa24.5■■□□□ 1.51
MCF2L-220ENST00000464800 MAGI2Q86UL8 1455 aa24.46■■□□□ 1.51
MCF2L-220ENST00000464800 YEATS2Q9ULM3 1422 aa24.46■■□□□ 1.51
MCF2L-220ENST00000464800 FER1L4A9Z1Z3 1794 aa24.46■■□□□ 1.51
MCF2L-220ENST00000464800 HECW1Q76N89 1606 aa24.46■■□□□ 1.51
MCF2L-220ENST00000464800 MYO5CQ9NQX4 1742 aa24.44■■□□□ 1.5
MCF2L-220ENST00000464800 PLCH2O75038 1416 aa24.41■■□□□ 1.5
MCF2L-220ENST00000464800 SCAPERQ9BY12 1400 aa24.39■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms