RNA–Protein interactions for RNA: ENST00000463994.4

CDKL5-203, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5

Gene CDKL5, Length 2,632 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-203ENST00000463994 HAP1P54257 671 aaPredicted RBP9.99□□□□□ -0.81
CDKL5-203ENST00000463994 PDE4CQ08493 712 aa9.96□□□□□ -0.81
CDKL5-203ENST00000463994 RTL5Q5HYW3 569 aaPredicted RBP9.96□□□□□ -0.82
CDKL5-203ENST00000463994 RSF1Q96T23 1441 aaPredicted RBP9.96□□□□□ -0.82
CDKL5-203ENST00000463994 LAMC3Q9Y6N6 1575 aa9.96□□□□□ -0.82
CDKL5-203ENST00000463994 NBR1Q14596 966 aa9.95□□□□□ -0.82
CDKL5-203ENST00000463994 RSPH6AQ9H0K4 717 aa9.94□□□□□ -0.82
CDKL5-203ENST00000463994 BAZ1BQ9UIG0 1483 aaKnown RBP9.94□□□□□ -0.82
CDKL5-203ENST00000463994 CDK11AQ9UQ88 783 aaPredicted RBP9.94□□□□□ -0.82
CDKL5-203ENST00000463994 ZBTB22O15209 634 aa9.93□□□□□ -0.82
CDKL5-203ENST00000463994 VSIG10Q8N0Z9 540 aa9.93□□□□□ -0.82
CDKL5-203ENST00000463994 FGD1P98174 961 aa9.92□□□□□ -0.82
CDKL5-203ENST00000463994 NOP58Q9Y2X3 529 aaKnown RBP9.92□□□□□ -0.82
CDKL5-203ENST00000463994 PDIA4P13667 645 aaKnown RBP9.92□□□□□ -0.82
CDKL5-203ENST00000463994 C11orf95C9JLR9 678 aaPredicted RBP9.91□□□□□ -0.82
CDKL5-203ENST00000463994 ITGAEP38570 1179 aa9.91□□□□□ -0.82
CDKL5-203ENST00000463994 ERCC6Q03468 1493 aa9.9□□□□□ -0.82
CDKL5-203ENST00000463994 NPM2Q86SE8 214 aaKnown RBP9.87□□□□□ -0.83
CDKL5-203ENST00000463994 THOC2Q8NI27 1593 aaKnown RBP9.86□□□□□ -0.83
CDKL5-203ENST00000463994 A0A0U1RQG5 324 aaPredicted RBP9.86□□□□□ -0.83
CDKL5-203ENST00000463994 AAMPQ13685 434 aa9.86□□□□□ -0.83
CDKL5-203ENST00000463994 ADRA2BP18089 450 aa9.84□□□□□ -0.83
CDKL5-203ENST00000463994 RBM10P98175 930 aaKnown RBP9.84□□□□□ -0.83
CDKL5-203ENST00000463994 DNAJC5Q9H3Z4 198 aa9.84□□□□□ -0.83
CDKL5-203ENST00000463994 PDS5BQ9NTI5 1447 aa9.83□□□□□ -0.84
CDKL5-203ENST00000463994 C14orf37Q86TY3 774 aa9.82□□□□□ -0.84
CDKL5-203ENST00000463994 MROH2BQ7Z745 1585 aa9.81□□□□□ -0.84
CDKL5-203ENST00000463994 WASHC2AQ641Q2 1341 aa9.81□□□□□ -0.84
CDKL5-203ENST00000463994 WASHC2CQ9Y4E1 1318 aa9.81□□□□□ -0.84
CDKL5-203ENST00000463994 PAK3O75914 559 aaPredicted RBP9.79□□□□□ -0.84
CDKL5-203ENST00000463994 TMEM132AQ24JP5 1023 aa9.79□□□□□ -0.84
CDKL5-203ENST00000463994 BCL11BQ9C0K0 894 aaPredicted RBP9.79□□□□□ -0.84
CDKL5-203ENST00000463994 USP35Q9P2H5 1018 aa9.77□□□□□ -0.85
CDKL5-203ENST00000463994 WDR62O43379 1518 aa9.76□□□□□ -0.85
CDKL5-203ENST00000463994 MRC2Q9UBG0 1479 aa9.75□□□□□ -0.85
CDKL5-203ENST00000463994 TAF7LQ5H9L4 462 aa9.75□□□□□ -0.85
CDKL5-203ENST00000463994 CADPSQ9ULU8 1353 aa9.75□□□□□ -0.85
CDKL5-203ENST00000463994 KDM2AQ9Y2K7 1162 aa9.74□□□□□ -0.85
CDKL5-203ENST00000463994 KIF21AQ7Z4S6 1674 aa9.74□□□□□ -0.85
CDKL5-203ENST00000463994 BRPF3Q9ULD4 1205 aa9.74□□□□□ -0.85
CDKL5-203ENST00000463994 PRDM2Q13029 1718 aa9.74□□□□□ -0.85
CDKL5-203ENST00000463994 TOP2AP11388 1531 aaKnown RBP9.73□□□□□ -0.85
CDKL5-203ENST00000463994 FAM43AQ8N2R8 423 aa9.72□□□□□ -0.85
CDKL5-203ENST00000463994 NESP48681 1621 aa9.72□□□□□ -0.85
CDKL5-203ENST00000463994 RRP9O43818 475 aaKnown RBP9.72□□□□□ -0.85
CDKL5-203ENST00000463994 ZBTB47Q9UFB7 747 aaPredicted RBP9.71□□□□□ -0.85
CDKL5-203ENST00000463994 IPO9Q96P70 1041 aaKnown RBP9.71□□□□□ -0.86
CDKL5-203ENST00000463994 WRNQ14191 1432 aaPredicted RBP eCLIP9.71□□□□□ -0.86
CDKL5-203ENST00000463994 FBLN2P98095 1184 aa9.7□□□□□ -0.86
CDKL5-203ENST00000463994 HSP90AA2PQ14568 343 aaPredicted RBP9.7□□□□□ -0.86
CDKL5-203ENST00000463994 NEFMP07197 916 aa9.7□□□□□ -0.86
CDKL5-203ENST00000463994 ANP32AP39687 249 aaKnown RBP9.69□□□□□ -0.86
CDKL5-203ENST00000463994 CEP164Q9UPV0 1460 aa9.68□□□□□ -0.86
CDKL5-203ENST00000463994 UBTFP17480 764 aaKnown RBP9.68□□□□□ -0.86
CDKL5-203ENST00000463994 KCNH8Q96L42 1107 aa9.68□□□□□ -0.86
CDKL5-203ENST00000463994 WIZO95785 1651 aa9.68□□□□□ -0.86
CDKL5-203ENST00000463994 CFTRP13569 1480 aa9.68□□□□□ -0.86
CDKL5-203ENST00000463994 PPP4R2Q9NY27 417 aa9.64□□□□□ -0.87
CDKL5-203ENST00000463994 GSE1Q14687 1217 aa9.63□□□□□ -0.87
CDKL5-203ENST00000463994 FANCD2Q9BXW9 1451 aa9.62□□□□□ -0.87
CDKL5-203ENST00000463994 ABCC8Q09428 1581 aa9.62□□□□□ -0.87
CDKL5-203ENST00000463994 HSP90AA1P07900 732 aaKnown RBP9.62□□□□□ -0.87
CDKL5-203ENST00000463994 PPM1GO15355 546 aaPredicted RBP9.61□□□□□ -0.87
CDKL5-203ENST00000463994 ZNF326Q5BKZ1 582 aaKnown RBP9.59□□□□□ -0.87
CDKL5-203ENST00000463994 EEA1Q15075 1411 aa9.59□□□□□ -0.87
CDKL5-203ENST00000463994 WDR97A6NE52 1622 aa9.58□□□□□ -0.88
CDKL5-203ENST00000463994 TNIKQ9UKE5 1360 aa9.58□□□□□ -0.88
CDKL5-203ENST00000463994 CALD1Q05682 793 aaKnown RBP9.57□□□□□ -0.88
CDKL5-203ENST00000463994 CEP162Q5TB80 1403 aa9.57□□□□□ -0.88
CDKL5-203ENST00000463994 TRIM52Q96A61 297 aa9.56□□□□□ -0.88
CDKL5-203ENST00000463994 PRDM4Q9UKN5 801 aa9.55□□□□□ -0.88
CDKL5-203ENST00000463994 NAP1L2Q9ULW6 460 aaPredicted RBP9.55□□□□□ -0.88
CDKL5-203ENST00000463994 CCER2I3L3R5 266 aa9.54□□□□□ -0.88
CDKL5-203ENST00000463994 RSPH4AQ5TD94 716 aa9.54□□□□□ -0.88
CDKL5-203ENST00000463994 IFT140Q96RY7 1462 aa9.54□□□□□ -0.88
CDKL5-203ENST00000463994 IRX6P78412 446 aaPredicted RBP9.54□□□□□ -0.88
CDKL5-203ENST00000463994 PPP6R1Q9UPN7 881 aa9.53□□□□□ -0.88
CDKL5-203ENST00000463994 CENPJQ9HC77 1338 aaPredicted RBP9.53□□□□□ -0.88
CDKL5-203ENST00000463994 NAP1L5Q96NT1 182 aaPredicted RBP9.52□□□□□ -0.88
CDKL5-203ENST00000463994 LAS1LQ9Y4W2 734 aaKnown RBP9.52□□□□□ -0.88
CDKL5-203ENST00000463994 BBXQ8WY36 941 aaPredicted RBP9.52□□□□□ -0.89
CDKL5-203ENST00000463994 URB2Q14146 1524 aaKnown RBP9.52□□□□□ -0.89
CDKL5-203ENST00000463994 PAXIP1Q6ZW49 1069 aaPredicted RBP9.52□□□□□ -0.89
CDKL5-203ENST00000463994 FRAT1Q92837 279 aaPredicted RBP9.52□□□□□ -0.89
CDKL5-203ENST00000463994 DNMBPQ6XZF7 1577 aa9.51□□□□□ -0.89
CDKL5-203ENST00000463994 CCDC88BA6NC98 1476 aa9.51□□□□□ -0.89
CDKL5-203ENST00000463994 NPM3O75607 178 aaKnown RBP9.5□□□□□ -0.89
CDKL5-203ENST00000463994 FBXO3Q9UK99 471 aa9.5□□□□□ -0.89
CDKL5-203ENST00000463994 RGS3P49796 1198 aa9.49□□□□□ -0.89
CDKL5-203ENST00000463994 B4GALNT3Q6L9W6 998 aa9.48□□□□□ -0.89
CDKL5-203ENST00000463994 IPO4Q8TEX9 1081 aaKnown RBP9.48□□□□□ -0.89
CDKL5-203ENST00000463994 PNNQ9H307 717 aaKnown RBP9.48□□□□□ -0.89
CDKL5-203ENST00000463994 HNRNPUL2Q1KMD3 747 aaKnown RBP9.48□□□□□ -0.89
CDKL5-203ENST00000463994 PDCL3Q9H2J4 239 aa9.48□□□□□ -0.89
CDKL5-203ENST00000463994 GOLGA3Q08378 1498 aa9.48□□□□□ -0.89
CDKL5-203ENST00000463994 RRAGDQ9NQL2 400 aaPredicted RBP9.47□□□□□ -0.89
CDKL5-203ENST00000463994 BRD2P25440 801 aaKnown RBP9.47□□□□□ -0.89
CDKL5-203ENST00000463994 CANXP27824 592 aaKnown RBP9.47□□□□□ -0.89
CDKL5-203ENST00000463994 CHMP4BQ9H444 224 aaKnown RBP9.47□□□□□ -0.89
CDKL5-203ENST00000463994 GTF2E1P29083 439 aaPredicted RBP9.46□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms