RNA–Protein interactions for RNA: ENST00000463936.1

RTN4R-204, Transcript of reticulon 4 receptor, humanhuman

TSL 4

Gene RTN4R, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4R-204ENST00000463936 KIF27Q86VH2 1401 aa25.26■■□□□ 1.63
RTN4R-204ENST00000463936 KIF13AQ9H1H9 1805 aa25.25■■□□□ 1.63
RTN4R-204ENST00000463936 KIAA0586Q9BVV6 1533 aa25.22■■□□□ 1.63
RTN4R-204ENST00000463936 CUL7Q14999 1698 aa25.2■■□□□ 1.62
RTN4R-204ENST00000463936 ADCY10Q96PN6 1610 aa25.17■■□□□ 1.62
RTN4R-204ENST00000463936 CARMIL1Q5VZK9 1371 aa25.15■■□□□ 1.62
RTN4R-204ENST00000463936 ABCC10Q5T3U5 1492 aa25.09■■□□□ 1.61
RTN4R-204ENST00000463936 FAM69CQ0P6D2 419 aa25.07■■□□□ 1.6
RTN4R-204ENST00000463936 MAPKBP1O60336 1514 aa25.07■■□□□ 1.6
RTN4R-204ENST00000463936 DIP2BQ9P265 1576 aa25.02■■□□□ 1.6
RTN4R-204ENST00000463936 NPM1P06748 294 aaKnown RBP eCLIP25.02■■□□□ 1.6
RTN4R-204ENST00000463936 PTPRGP23470 1445 aa24.99■■□□□ 1.59
RTN4R-204ENST00000463936 TTBK1Q5TCY1 1321 aaPredicted RBP24.99■■□□□ 1.59
RTN4R-204ENST00000463936 AEBP2Q6ZN18 517 aaPredicted RBP24.97■■□□□ 1.59
RTN4R-204ENST00000463936 IQGAP2Q13576 1575 aa24.95■■□□□ 1.58
RTN4R-204ENST00000463936 DISP1Q96F81 1524 aa24.94■■□□□ 1.58
RTN4R-204ENST00000463936 TNIKQ9UKE5 1360 aa24.93■■□□□ 1.58
RTN4R-204ENST00000463936 CARMIL2Q6F5E8 1435 aa24.89■■□□□ 1.58
RTN4R-204ENST00000463936 RAPGEF2Q9Y4G8 1499 aa24.89■■□□□ 1.57
RTN4R-204ENST00000463936 TSPOAP1O95153 1857 aa24.87■■□□□ 1.57
RTN4R-204ENST00000463936 ABCC2Q92887 1545 aa24.86■■□□□ 1.57
RTN4R-204ENST00000463936 UGGT2Q9NYU1 1516 aa24.83■■□□□ 1.57
RTN4R-204ENST00000463936 UHRF1BP1LA0JNW5 1464 aa24.82■■□□□ 1.56
RTN4R-204ENST00000463936 ASXL2Q76L83 1435 aa24.81■■□□□ 1.56
RTN4R-204ENST00000463936 UACAQ9BZF9 1416 aa24.8■■□□□ 1.56
RTN4R-204ENST00000463936 KDM6BO15054 1643 aa24.76■■□□□ 1.55
RTN4R-204ENST00000463936 PPRC1Q5VV67 1664 aaKnown RBP24.76■■□□□ 1.55
RTN4R-204ENST00000463936 KIAA0556O60303 1618 aa24.75■■□□□ 1.55
RTN4R-204ENST00000463936 KDM5BQ9UGL1 1544 aa24.74■■□□□ 1.55
RTN4R-204ENST00000463936 GLI2P10070 1586 aa24.72■■□□□ 1.55
RTN4R-204ENST00000463936 PLB1Q6P1J6 1458 aa24.72■■□□□ 1.55
RTN4R-204ENST00000463936 KDM4FA0A1W2PPD8 638 aa24.7■■□□□ 1.54
RTN4R-204ENST00000463936 PRXQ9BXM0 1461 aa24.69■■□□□ 1.54
RTN4R-204ENST00000463936 ZCCHC11Q5TAX3 1644 aaKnown RBP24.68■■□□□ 1.54
RTN4R-204ENST00000463936 CTTNBP2Q8WZ74 1663 aa24.67■■□□□ 1.54
RTN4R-204ENST00000463936 EPRSP07814 1512 aaKnown RBP24.66■■□□□ 1.54
RTN4R-204ENST00000463936 COL17A1Q9UMD9 1497 aaPredicted RBP24.66■■□□□ 1.54
RTN4R-204ENST00000463936 MAP3K4Q9Y6R4 1608 aa24.61■■□□□ 1.53
RTN4R-204ENST00000463936 ABCA8O94911 1581 aa24.58■■□□□ 1.52
RTN4R-204ENST00000463936 WDR7Q9Y4E6 1490 aa24.52■■□□□ 1.52
RTN4R-204ENST00000463936 GOLGA3Q08378 1498 aa24.51■■□□□ 1.51
RTN4R-204ENST00000463936 P3H3Q8IVL6 736 aa24.49■■□□□ 1.51
RTN4R-204ENST00000463936 CSRNP3Q8WYN3 585 aa24.46■■□□□ 1.51
RTN4R-204ENST00000463936 KCNH8Q96L42 1107 aa24.45■■□□□ 1.5
RTN4R-204ENST00000463936 ARID3CA6NKF2 412 aa24.42■■□□□ 1.5
RTN4R-204ENST00000463936 TEX14Q8IWB6 1497 aa24.41■■□□□ 1.5
RTN4R-204ENST00000463936 ATP10BO94823 1461 aa24.4■■□□□ 1.5
RTN4R-204ENST00000463936 CD109Q6YHK3 1445 aa24.39■■□□□ 1.5
RTN4R-204ENST00000463936 ADGRL1O94910 1474 aa24.38■■□□□ 1.49
RTN4R-204ENST00000463936 SAMD9Q5K651 1589 aa24.37■■□□□ 1.49
RTN4R-204ENST00000463936 MAGI3Q5TCQ9 1506 aa24.37■■□□□ 1.49
RTN4R-204ENST00000463936 CFAP43Q8NDM7 1665 aa24.36■■□□□ 1.49
RTN4R-204ENST00000463936 FAM9AQ8IZU1 332 aaPredicted RBP24.29■■□□□ 1.48
RTN4R-204ENST00000463936 RANGAP1P46060 587 aaPredicted RBP24.27■■□□□ 1.48
RTN4R-204ENST00000463936 RAPGEF6Q8TEU7 1601 aa24.25■■□□□ 1.47
RTN4R-204ENST00000463936 EEA1Q15075 1411 aa24.23■■□□□ 1.47
RTN4R-204ENST00000463936 FHOD3Q2V2M9 1422 aa24.23■■□□□ 1.47
RTN4R-204ENST00000463936 NUP153P49790 1475 aaKnown RBP24.23■■□□□ 1.47
RTN4R-204ENST00000463936 ABCA9Q8IUA7 1624 aa24.21■■□□□ 1.47
RTN4R-204ENST00000463936 ARAP3Q8WWN8 1544 aa24.2■■□□□ 1.46
RTN4R-204ENST00000463936 KIF21BO75037 1637 aa24.14■■□□□ 1.46
RTN4R-204ENST00000463936 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.12■■□□□ 1.45
RTN4R-204ENST00000463936 RAPGEF3O95398 923 aa24.12■■□□□ 1.45
RTN4R-204ENST00000463936 HNRNPUL2Q1KMD3 747 aaKnown RBP24.12■■□□□ 1.45
RTN4R-204ENST00000463936 EHMT2Q96KQ7 1210 aa24.08■■□□□ 1.45
RTN4R-204ENST00000463936 CHIC1Q5VXU3 224 aa24.07■■□□□ 1.44
RTN4R-204ENST00000463936 FRMPD1Q5SYB0 1578 aa24.07■■□□□ 1.44
RTN4R-204ENST00000463936 HECW2Q9P2P5 1572 aa24.06■■□□□ 1.44
RTN4R-204ENST00000463936 NEO1Q92859 1461 aa24.05■■□□□ 1.44
RTN4R-204ENST00000463936 PHLDB1Q86UU1 1377 aa24.03■■□□□ 1.44
RTN4R-204ENST00000463936 EFCAB5A4FU69 1503 aa24.02■■□□□ 1.44
RTN4R-204ENST00000463936 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24■■□□□ 1.436e-6■■■■■ 38.2
RTN4R-204ENST00000463936 PLEKHD1A6NEE1 506 aa24■■□□□ 1.43
RTN4R-204ENST00000463936 CDK13Q14004 1512 aaKnown RBP24■■□□□ 1.43
RTN4R-204ENST00000463936 TTC37Q6PGP7 1564 aa23.97■■□□□ 1.43
RTN4R-204ENST00000463936 ADAMTSL3P82987 1691 aa23.96■■□□□ 1.43
RTN4R-204ENST00000463936 ARHGAP35Q9NRY4 1499 aa23.94■■□□□ 1.42
RTN4R-204ENST00000463936 UBTFP17480 764 aaKnown RBP23.94■■□□□ 1.42
RTN4R-204ENST00000463936 AKNAQ7Z591 1439 aa23.93■■□□□ 1.42
RTN4R-204ENST00000463936 ILDR1Q86SU0 546 aaPredicted RBP23.93■■□□□ 1.42
RTN4R-204ENST00000463936 RICTORQ6R327 1708 aa23.93■■□□□ 1.42
RTN4R-204ENST00000463936 FANCAO15360 1455 aa23.91■■□□□ 1.42
RTN4R-204ENST00000463936 PTPRMP28827 1452 aa23.89■■□□□ 1.42
RTN4R-204ENST00000463936 DENND4BO75064 1496 aaPredicted RBP23.88■■□□□ 1.41
RTN4R-204ENST00000463936 BCORL1Q5H9F3 1711 aa23.88■■□□□ 1.41
RTN4R-204ENST00000463936 SIGLEC1Q9BZZ2 1709 aa23.88■■□□□ 1.41
RTN4R-204ENST00000463936 LRRIQ1Q96JM4 1722 aa23.84■■□□□ 1.41
RTN4R-204ENST00000463936 MADDQ8WXG6 1647 aa23.84■■□□□ 1.41
RTN4R-204ENST00000463936 ARHGEF40Q8TER5 1519 aa23.84■■□□□ 1.41
RTN4R-204ENST00000463936 YEATS2Q9ULM3 1422 aa23.84■■□□□ 1.41
RTN4R-204ENST00000463936 ATP1B4Q9UN42 357 aaPredicted RBP23.83■■□□□ 1.41
RTN4R-204ENST00000463936 PLCH2O75038 1416 aa23.83■■□□□ 1.4
RTN4R-204ENST00000463936 FMN1Q68DA7 1419 aa23.81■■□□□ 1.4
RTN4R-204ENST00000463936 KIF14Q15058 1648 aa23.8■■□□□ 1.4
RTN4R-204ENST00000463936 ARID4BQ4LE39 1312 aaPredicted RBP23.8■■□□□ 1.4
RTN4R-204ENST00000463936 ZMYM4Q5VZL5 1548 aa23.79■■□□□ 1.4
RTN4R-204ENST00000463936 CFAP74Q9C0B2 1584 aa23.79■■□□□ 1.4
RTN4R-204ENST00000463936 HECW1Q76N89 1606 aa23.78■■□□□ 1.4
RTN4R-204ENST00000463936 SCAPERQ9BY12 1400 aa23.76■■□□□ 1.39
RTN4R-204ENST00000463936 RIMS1Q86UR5 1692 aaKnown RBP23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms