RNA–Protein interactions for RNA: ENST00000463503.5

SSR3-202, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 596 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-202ENST00000463503 WRNQ14191 1432 aaPredicted RBP eCLIP20.37■□□□□ 0.85
SSR3-202ENST00000463503 ADCY10Q96PN6 1610 aa20.37■□□□□ 0.85
SSR3-202ENST00000463503 PRG4Q92954 1404 aaPredicted RBP20.34■□□□□ 0.85
SSR3-202ENST00000463503 KDM6BO15054 1643 aa20.34■□□□□ 0.85
SSR3-202ENST00000463503 TSPOAP1O95153 1857 aa20.33■□□□□ 0.84
SSR3-202ENST00000463503 KDM4FA0A1W2PPD8 638 aa20.22■□□□□ 0.83
SSR3-202ENST00000463503 FAM69CQ0P6D2 419 aa20.21■□□□□ 0.83
SSR3-202ENST00000463503 PPRC1Q5VV67 1664 aaKnown RBP20.19■□□□□ 0.82
SSR3-202ENST00000463503 JPH4Q96JJ6 628 aa20.18■□□□□ 0.82
SSR3-202ENST00000463503 ILDR1Q86SU0 546 aaPredicted RBP20.1■□□□□ 0.81
SSR3-202ENST00000463503 CUL7Q14999 1698 aa20.09■□□□□ 0.81
SSR3-202ENST00000463503 KIAA0586Q9BVV6 1533 aa20.07■□□□□ 0.8
SSR3-202ENST00000463503 NPM1P06748 294 aaKnown RBP eCLIP20.06■□□□□ 0.8
SSR3-202ENST00000463503 ADGRL1O94910 1474 aa20.04■□□□□ 0.8
SSR3-202ENST00000463503 GLI2P10070 1586 aa20.04■□□□□ 0.8
SSR3-202ENST00000463503 HECW2Q9P2P5 1572 aa20■□□□□ 0.79
SSR3-202ENST00000463503 MAP3K4Q9Y6R4 1608 aa19.99■□□□□ 0.79
SSR3-202ENST00000463503 ABCC2Q92887 1545 aa19.98■□□□□ 0.79
SSR3-202ENST00000463503 ASXL2Q76L83 1435 aa19.93■□□□□ 0.78
SSR3-202ENST00000463503 COL17A1Q9UMD9 1497 aaPredicted RBP19.92■□□□□ 0.78
SSR3-202ENST00000463503 PLB1Q6P1J6 1458 aa19.91■□□□□ 0.78
SSR3-202ENST00000463503 PTPRGP23470 1445 aa19.9■□□□□ 0.78
SSR3-202ENST00000463503 UHRF1BP1LA0JNW5 1464 aa19.9■□□□□ 0.78
SSR3-202ENST00000463503 SUPT5HO00267 1087 aaKnown RBP19.89■□□□□ 0.77
SSR3-202ENST00000463503 IGF1RP08069 1367 aa19.89■□□□□ 0.77
SSR3-202ENST00000463503 IQGAP2Q13576 1575 aa19.89■□□□□ 0.77
SSR3-202ENST00000463503 ZCCHC11Q5TAX3 1644 aaKnown RBP19.87■□□□□ 0.77
SSR3-202ENST00000463503 KIF27Q86VH2 1401 aa19.85■□□□□ 0.77
SSR3-202ENST00000463503 TNIKQ9UKE5 1360 aa19.84■□□□□ 0.77
SSR3-202ENST00000463503 EPRSP07814 1512 aaKnown RBP19.84■□□□□ 0.77
SSR3-202ENST00000463503 DISP1Q96F81 1524 aa19.82■□□□□ 0.76
SSR3-202ENST00000463503 KDM5BQ9UGL1 1544 aa19.82■□□□□ 0.76
SSR3-202ENST00000463503 CARMIL2Q6F5E8 1435 aa19.81■□□□□ 0.76
SSR3-202ENST00000463503 TEX14Q8IWB6 1497 aa19.79■□□□□ 0.76
SSR3-202ENST00000463503 UACAQ9BZF9 1416 aa19.78■□□□□ 0.76
SSR3-202ENST00000463503 KIAA0556O60303 1618 aa19.75■□□□□ 0.75
SSR3-202ENST00000463503 CFAP43Q8NDM7 1665 aa19.74■□□□□ 0.75
SSR3-202ENST00000463503 KIF21BO75037 1637 aa19.73■□□□□ 0.75
SSR3-202ENST00000463503 CARMIL1Q5VZK9 1371 aa19.73■□□□□ 0.75
SSR3-202ENST00000463503 UGGT2Q9NYU1 1516 aa19.73■□□□□ 0.75
SSR3-202ENST00000463503 TTBK1Q5TCY1 1321 aaPredicted RBP19.73■□□□□ 0.75
SSR3-202ENST00000463503 WDR7Q9Y4E6 1490 aa19.68■□□□□ 0.74
SSR3-202ENST00000463503 CTTNBP2Q8WZ74 1663 aa19.66■□□□□ 0.74
SSR3-202ENST00000463503 MAGI3Q5TCQ9 1506 aa19.64■□□□□ 0.73
SSR3-202ENST00000463503 ADAMTSL3P82987 1691 aa19.59■□□□□ 0.73
SSR3-202ENST00000463503 ABCA8O94911 1581 aa19.58■□□□□ 0.73
SSR3-202ENST00000463503 RAPGEF2Q9Y4G8 1499 aa19.54■□□□□ 0.72
SSR3-202ENST00000463503 CD109Q6YHK3 1445 aa19.53■□□□□ 0.72
SSR3-202ENST00000463503 FBXO41Q8TF61 875 aa19.51■□□□□ 0.71
SSR3-202ENST00000463503 ARAP3Q8WWN8 1544 aa19.51■□□□□ 0.71
SSR3-202ENST00000463503 BCORL1Q5H9F3 1711 aa19.48■□□□□ 0.71
SSR3-202ENST00000463503 PTPRMP28827 1452 aa19.48■□□□□ 0.71
SSR3-202ENST00000463503 ABCA9Q8IUA7 1624 aa19.46■□□□□ 0.71
SSR3-202ENST00000463503 MADDQ8WXG6 1647 aa19.46■□□□□ 0.71
SSR3-202ENST00000463503 FRMPD1Q5SYB0 1578 aa19.45■□□□□ 0.7
SSR3-202ENST00000463503 PCF11O94913 1555 aaKnown RBP19.44■□□□□ 0.7
SSR3-202ENST00000463503 GOLGA3Q08378 1498 aa19.42■□□□□ 0.7
SSR3-202ENST00000463503 LMTK3Q96Q04 1460 aa19.41■□□□□ 0.7
SSR3-202ENST00000463503 RIMS1Q86UR5 1692 aaKnown RBP19.38■□□□□ 0.69
SSR3-202ENST00000463503 KCNH8Q96L42 1107 aa19.36■□□□□ 0.69
SSR3-202ENST00000463503 ARHGEF40Q8TER5 1519 aa19.35■□□□□ 0.69
SSR3-202ENST00000463503 RICTORQ6R327 1708 aa19.34■□□□□ 0.69
SSR3-202ENST00000463503 SIGLEC1Q9BZZ2 1709 aa19.33■□□□□ 0.68
SSR3-202ENST00000463503 ATP10BO94823 1461 aa19.31■□□□□ 0.68
SSR3-202ENST00000463503 NEO1Q92859 1461 aa19.3■□□□□ 0.68
SSR3-202ENST00000463503 PHLDB1Q86UU1 1377 aa19.29■□□□□ 0.68
SSR3-202ENST00000463503 SAMD9Q5K651 1589 aa19.28■□□□□ 0.68
SSR3-202ENST00000463503 RAPGEF6Q8TEU7 1601 aa19.27■□□□□ 0.68
SSR3-202ENST00000463503 PRXQ9BXM0 1461 aa19.26■□□□□ 0.67
SSR3-202ENST00000463503 RAPGEF3O95398 923 aa19.23■□□□□ 0.67
SSR3-202ENST00000463503 FER1L4A9Z1Z3 1794 aa19.23■□□□□ 0.67
SSR3-202ENST00000463503 ZMYM4Q5VZL5 1548 aa19.2■□□□□ 0.66
SSR3-202ENST00000463503 CFAP74Q9C0B2 1584 aa19.2■□□□□ 0.66
SSR3-202ENST00000463503 ARID3CA6NKF2 412 aa19.18■□□□□ 0.66
SSR3-202ENST00000463503 TTC37Q6PGP7 1564 aa19.18■□□□□ 0.66
SSR3-202ENST00000463503 NUP153P49790 1475 aaKnown RBP19.16■□□□□ 0.66
SSR3-202ENST00000463503 PREX1Q8TCU6 1659 aa19.15■□□□□ 0.66
SSR3-202ENST00000463503 FANCAO15360 1455 aa19.13■□□□□ 0.65
SSR3-202ENST00000463503 ZFYVE16Q7Z3T8 1539 aa19.12■□□□□ 0.65
SSR3-202ENST00000463503 FHOD3Q2V2M9 1422 aa19.12■□□□□ 0.65
SSR3-202ENST00000463503 EFCAB5A4FU69 1503 aa19.11■□□□□ 0.65
SSR3-202ENST00000463503 DENND4BO75064 1496 aaPredicted RBP19.11■□□□□ 0.65
SSR3-202ENST00000463503 STRCQ7RTU9 1775 aa19.11■□□□□ 0.65
SSR3-202ENST00000463503 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.1■□□□□ 0.65
SSR3-202ENST00000463503 ARID4BQ4LE39 1312 aaPredicted RBP19.1■□□□□ 0.65
SSR3-202ENST00000463503 HSPA2P54652 639 aa19.1■□□□□ 0.65
SSR3-202ENST00000463503 HECW1Q76N89 1606 aa19.07■□□□□ 0.64
SSR3-202ENST00000463503 AKNAQ7Z591 1439 aa19.07■□□□□ 0.64
SSR3-202ENST00000463503 YEATS2Q9ULM3 1422 aa19.07■□□□□ 0.64
SSR3-202ENST00000463503 P3H3Q8IVL6 736 aa19.06■□□□□ 0.64
SSR3-202ENST00000463503 ARHGEF12Q9NZN5 1544 aa19.05■□□□□ 0.64
SSR3-202ENST00000463503 CERKQ8TCT0 537 aa19.05■□□□□ 0.64
SSR3-202ENST00000463503 POGZQ7Z3K3 1410 aa19.05■□□□□ 0.64
SSR3-202ENST00000463503 MAGI2Q86UL8 1455 aa19.03■□□□□ 0.64
SSR3-202ENST00000463503 SPATA31D1Q6ZQQ2 1576 aa19.02■□□□□ 0.63
SSR3-202ENST00000463503 ILDR2Q71H61 639 aa19■□□□□ 0.63
SSR3-202ENST00000463503 MYO5CQ9NQX4 1742 aa18.99■□□□□ 0.63
SSR3-202ENST00000463503 FAM9AQ8IZU1 332 aaPredicted RBP18.95■□□□□ 0.62
SSR3-202ENST00000463503 DISP3Q9P2K9 1392 aa18.94■□□□□ 0.62
SSR3-202ENST00000463503 SETD1BQ9UPS6 1966 aaKnown RBP18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms