RNA–Protein interactions for RNA: ENST00000463285.5

CTPS1-203, Transcript of CTP synthase 1, humanhuman

TSL 3

Gene CTPS1, Length 739 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-203ENST00000463285 WRNQ14191 1432 aaPredicted RBP eCLIP15.9■□□□□ 0.14
CTPS1-203ENST00000463285 SUPT5HO00267 1087 aaKnown RBP15.87■□□□□ 0.13
CTPS1-203ENST00000463285 FHAD1B1AJZ9 1412 aa15.86■□□□□ 0.13
CTPS1-203ENST00000463285 SHROOM2Q13796 1616 aa15.85■□□□□ 0.13
CTPS1-203ENST00000463285 TOP2BQ02880 1626 aa15.83■□□□□ 0.12
CTPS1-203ENST00000463285 BIVM-ERCC5R4GMW8 1640 aa15.83■□□□□ 0.12
CTPS1-203ENST00000463285 ERICH3Q5RHP9 1530 aa15.8■□□□□ 0.12
CTPS1-203ENST00000463285 PRG4Q92954 1404 aaPredicted RBP15.8■□□□□ 0.12
CTPS1-203ENST00000463285 KIF13AQ9H1H9 1805 aa15.79■□□□□ 0.12
CTPS1-203ENST00000463285 JPH4Q96JJ6 628 aa15.76■□□□□ 0.11
CTPS1-203ENST00000463285 NPM1P06748 294 aaKnown RBP eCLIP15.72■□□□□ 0.11
CTPS1-203ENST00000463285 FAM69CQ0P6D2 419 aa15.72■□□□□ 0.11
CTPS1-203ENST00000463285 RUSC2Q8N2Y8 1516 aa15.7■□□□□ 0.1
CTPS1-203ENST00000463285 ABCC10Q5T3U5 1492 aa15.69■□□□□ 0.1
CTPS1-203ENST00000463285 MAPKBP1O60336 1514 aa15.65■□□□□ 0.1
CTPS1-203ENST00000463285 DIP2BQ9P265 1576 aa15.65■□□□□ 0.1
CTPS1-203ENST00000463285 ADCY10Q96PN6 1610 aa15.64■□□□□ 0.09
CTPS1-203ENST00000463285 KDM6BO15054 1643 aa15.61■□□□□ 0.09
CTPS1-203ENST00000463285 KIAA0586Q9BVV6 1533 aa15.58■□□□□ 0.09
CTPS1-203ENST00000463285 TSPOAP1O95153 1857 aa15.57■□□□□ 0.08
CTPS1-203ENST00000463285 TTBK1Q5TCY1 1321 aaPredicted RBP15.57■□□□□ 0.08
CTPS1-203ENST00000463285 KDM4FA0A1W2PPD8 638 aa15.55■□□□□ 0.08
CTPS1-203ENST00000463285 IGF1RP08069 1367 aa15.54■□□□□ 0.08
CTPS1-203ENST00000463285 KIF27Q86VH2 1401 aa15.53■□□□□ 0.08
CTPS1-203ENST00000463285 CUL7Q14999 1698 aa15.53■□□□□ 0.08
CTPS1-203ENST00000463285 MAPK8IP2Q13387 824 aaPredicted RBP15.52■□□□□ 0.08
CTPS1-203ENST00000463285 PTPRGP23470 1445 aa15.51■□□□□ 0.07
CTPS1-203ENST00000463285 CARMIL2Q6F5E8 1435 aa15.46■□□□□ 0.07
CTPS1-203ENST00000463285 ABCC2Q92887 1545 aa15.46■□□□□ 0.07
CTPS1-203ENST00000463285 TNIKQ9UKE5 1360 aa15.46■□□□□ 0.07
CTPS1-203ENST00000463285 CARMIL1Q5VZK9 1371 aa15.45■□□□□ 0.06
CTPS1-203ENST00000463285 ASXL2Q76L83 1435 aa15.44■□□□□ 0.06
CTPS1-203ENST00000463285 DMRT2Q9Y5R5 561 aa15.43■□□□□ 0.06
CTPS1-203ENST00000463285 PLB1Q6P1J6 1458 aa15.42■□□□□ 0.06
CTPS1-203ENST00000463285 PPRC1Q5VV67 1664 aaKnown RBP15.41■□□□□ 0.06
CTPS1-203ENST00000463285 GLI2P10070 1586 aa15.41■□□□□ 0.06
CTPS1-203ENST00000463285 IQGAP2Q13576 1575 aa15.41■□□□□ 0.06
CTPS1-203ENST00000463285 SCAF1Q9H7N4 1312 aaKnown RBP15.4■□□□□ 0.06
CTPS1-203ENST00000463285 ILDR1Q86SU0 546 aaPredicted RBP15.39■□□□□ 0.05
CTPS1-203ENST00000463285 ADGRL1O94910 1474 aa15.39■□□□□ 0.05
CTPS1-203ENST00000463285 UACAQ9BZF9 1416 aa15.38■□□□□ 0.05
CTPS1-203ENST00000463285 UHRF1BP1LA0JNW5 1464 aa15.38■□□□□ 0.05
CTPS1-203ENST00000463285 EPRSP07814 1512 aaKnown RBP15.34■□□□□ 0.05
CTPS1-203ENST00000463285 DISP1Q96F81 1524 aa15.34■□□□□ 0.05
CTPS1-203ENST00000463285 COL17A1Q9UMD9 1497 aaPredicted RBP15.33■□□□□ 0.05
CTPS1-203ENST00000463285 KDM5BQ9UGL1 1544 aa15.32■□□□□ 0.04
CTPS1-203ENST00000463285 MAP3K4Q9Y6R4 1608 aa15.32■□□□□ 0.04
CTPS1-203ENST00000463285 TEX14Q8IWB6 1497 aa15.31■□□□□ 0.04
CTPS1-203ENST00000463285 ZCCHC11Q5TAX3 1644 aaKnown RBP15.31■□□□□ 0.04
CTPS1-203ENST00000463285 UGGT2Q9NYU1 1516 aa15.28■□□□□ 0.04
CTPS1-203ENST00000463285 KIAA0556O60303 1618 aa15.28■□□□□ 0.04
CTPS1-203ENST00000463285 RAPGEF2Q9Y4G8 1499 aa15.27■□□□□ 0.04
CTPS1-203ENST00000463285 HECW2Q9P2P5 1572 aa15.25■□□□□ 0.03
CTPS1-203ENST00000463285 WDR7Q9Y4E6 1490 aa15.24■□□□□ 0.03
CTPS1-203ENST00000463285 KCNH8Q96L42 1107 aa15.2■□□□□ 0.02
CTPS1-203ENST00000463285 CD109Q6YHK3 1445 aa15.18■□□□□ 0.02
CTPS1-203ENST00000463285 PPP4R3CPQ6ZMV5 832 aa15.17■□□□□ 0.02
CTPS1-203ENST00000463285 CFAP43Q8NDM7 1665 aa15.16■□□□□ 0.02
CTPS1-203ENST00000463285 CTTNBP2Q8WZ74 1663 aa15.16■□□□□ 0.02
CTPS1-203ENST00000463285 MAGI3Q5TCQ9 1506 aa15.16■□□□□ 0.02
CTPS1-203ENST00000463285 GOLGA3Q08378 1498 aa15.15■□□□□ 0.02
CTPS1-203ENST00000463285 ABCA8O94911 1581 aa15.15■□□□□ 0.02
CTPS1-203ENST00000463285 KIF21BO75037 1637 aa15.12■□□□□ 0.01
CTPS1-203ENST00000463285 ARID3CA6NKF2 412 aa15.1■□□□□ 0.01
CTPS1-203ENST00000463285 FAM9AQ8IZU1 332 aaPredicted RBP15.06■□□□□ 0
CTPS1-203ENST00000463285 P3H3Q8IVL6 736 aa15.05■□□□□ -0
CTPS1-203ENST00000463285 ARAP3Q8WWN8 1544 aa15.05■□□□□ -0
CTPS1-203ENST00000463285 PRXQ9BXM0 1461 aa15.03■□□□□ -0
CTPS1-203ENST00000463285 ATP10BO94823 1461 aa15.02■□□□□ -0
CTPS1-203ENST00000463285 FBXO41Q8TF61 875 aa15□□□□□ -0.01
CTPS1-203ENST00000463285 ABCA9Q8IUA7 1624 aa14.99□□□□□ -0.01
CTPS1-203ENST00000463285 RAPGEF3O95398 923 aa14.99□□□□□ -0.01
CTPS1-203ENST00000463285 PTPRMP28827 1452 aa14.99□□□□□ -0.01
CTPS1-203ENST00000463285 ADAMTSL3P82987 1691 aa14.98□□□□□ -0.01
CTPS1-203ENST00000463285 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.98□□□□□ -0.01
CTPS1-203ENST00000463285 HNRNPUL2Q1KMD3 747 aaKnown RBP14.98□□□□□ -0.01
CTPS1-203ENST00000463285 PHLDB1Q86UU1 1377 aa14.98□□□□□ -0.01
CTPS1-203ENST00000463285 ARID4BQ4LE39 1312 aaPredicted RBP14.97□□□□□ -0.01
CTPS1-203ENST00000463285 NEO1Q92859 1461 aa14.95□□□□□ -0.02
CTPS1-203ENST00000463285 RAPGEF6Q8TEU7 1601 aa14.94□□□□□ -0.02
CTPS1-203ENST00000463285 MADDQ8WXG6 1647 aa14.93□□□□□ -0.02
CTPS1-203ENST00000463285 BCORL1Q5H9F3 1711 aa14.93□□□□□ -0.02
CTPS1-203ENST00000463285 SAMD9Q5K651 1589 aa14.93□□□□□ -0.02
CTPS1-203ENST00000463285 FRMPD1Q5SYB0 1578 aa14.92□□□□□ -0.02
CTPS1-203ENST00000463285 RANGAP1P46060 587 aaPredicted RBP14.91□□□□□ -0.02
CTPS1-203ENST00000463285 PCF11O94913 1555 aaKnown RBP14.9□□□□□ -0.02
CTPS1-203ENST00000463285 HOXD11P31277 338 aaPredicted RBP14.88□□□□□ -0.03
CTPS1-203ENST00000463285 CNKSR2Q8WXI2 1034 aa14.88□□□□□ -0.03
CTPS1-203ENST00000463285 NUP153P49790 1475 aaKnown RBP14.88□□□□□ -0.03
CTPS1-203ENST00000463285 RIMS1Q86UR5 1692 aaKnown RBP14.87□□□□□ -0.03
CTPS1-203ENST00000463285 CSRNP3Q8WYN3 585 aa14.87□□□□□ -0.03
CTPS1-203ENST00000463285 LMTK3Q96Q04 1460 aa14.87□□□□□ -0.03
CTPS1-203ENST00000463285 ARHGEF40Q8TER5 1519 aa14.87□□□□□ -0.03
CTPS1-203ENST00000463285 DENND4BO75064 1496 aaPredicted RBP14.86□□□□□ -0.03
CTPS1-203ENST00000463285 FHOD3Q2V2M9 1422 aa14.85□□□□□ -0.03
CTPS1-203ENST00000463285 PLEKHD1A6NEE1 506 aa14.84□□□□□ -0.03
CTPS1-203ENST00000463285 AKNAQ7Z591 1439 aa14.83□□□□□ -0.03
CTPS1-203ENST00000463285 HSPA2P54652 639 aa14.83□□□□□ -0.04
CTPS1-203ENST00000463285 RICTORQ6R327 1708 aa14.83□□□□□ -0.04
CTPS1-203ENST00000463285 FANCAO15360 1455 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms